Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G33240 Arabidopsis lyrata HOM05D006735 ORTHO05D009558 9.4e-60 233.8 164 100.0
AT3G19790 Arabidopsis thaliana HOM05D006735 ORTHO05D009558 2.4e-39 166.0 165 77.6
Carub.0003s1967 Capsella rubella HOM05D006735 ORTHO05D009558 8.3e-32 141.0 169 59.2
Thhalv10022056m.g Eutrema salsugineum HOM05D006735 ORTHO05D009558 4.0e-18 95.5 70 65.7
AL2G40820 Arabidopsis lyrata HOM05D006735 ORTHO05D009558 3.3e-12 75.9 67 55.2
Sp5g35140 Schrenkiella parvula HOM05D006735 ORTHO05D009558 9.6e-12 74.3 82 46.3
AT1G80625 Arabidopsis thaliana HOM05D006735 ORTHO05D009558 4.0e-10 68.9 67 50.7
A01p26730 Brassica napus HOM05D006735 ORTHO05D009558 3.4e-09 65.9 59 49.2
C09p22370 Brassica napus HOM05D006735 ORTHO05D009558 3.4e-09 65.9 59 49.2
BcaC01g02272 Brassica carinata HOM05D006735 ORTHO05D009558 5.8e-09 65.1 64 43.8
BcaC01g03559 Brassica carinata HOM05D006735 ORTHO05D009558 5.8e-09 65.1 64 43.8
BcaC08g43985 Brassica carinata HOM05D006735 ORTHO05D009558 5.8e-09 65.1 64 43.8
C03p67160 Brassica napus HOM05D006735 ORTHO05D009558 5.8e-09 65.1 64 43.8
BolC3t17400H Brassica oleracea HOM05D006735 ORTHO05D009558 5.8e-09 65.1 64 43.8
BcaC03g18043 Brassica carinata HOM05D006735 ORTHO05D009558 7.6e-09 64.7 64 42.2
A09p42550 Brassica napus HOM05D006735 ORTHO05D009558 7.6e-09 64.7 57 45.6
C03p85420 Brassica napus HOM05D006735 ORTHO05D009558 7.6e-09 64.7 59 49.2
BcaC03g15864 Brassica carinata HOM05D006735 ORTHO05D009558 9.9e-09 64.3 59 47.5
BcaC07g38146 Brassica carinata HOM05D006735 ORTHO05D009558 9.9e-09 64.3 59 47.5
BcaC08g45821 Brassica carinata HOM05D006735 ORTHO05D009558 9.9e-09 64.3 59 47.5
BcaC09g51566 Brassica carinata HOM05D006735 ORTHO05D009558 9.9e-09 64.3 57 45.6
A08p25190 Brassica napus HOM05D006735 ORTHO05D009558 9.9e-09 64.3 59 47.5
C01p49010 Brassica napus HOM05D006735 ORTHO05D000586 9.9e-09 64.3 59 47.5
C04p61000 Brassica napus HOM05D006735 ORTHO05D009558 9.9e-09 64.3 57 45.6
C09p40570 Brassica napus HOM05D006735 ORTHO05D009558 1.3e-08 63.9 57 45.6
BcaB01g02897 Brassica carinata HOM05D006735 ORTHO05D009558 2.2e-08 63.2 64 40.6
BcaC04g20691 Brassica carinata HOM05D006735 ORTHO05D009558 2.2e-08 63.2 57 45.6
BcaC09g48693 Brassica carinata HOM05D006735 ORTHO05D009558 2.2e-08 63.2 59 47.5
BcaC09g51945 Brassica carinata HOM05D006735 ORTHO05D009558 2.2e-08 63.2 59 47.5
C03p17760 Brassica napus HOM05D006735 ORTHO05D009558 2.9e-08 62.8 57 45.6
C04p69030 Brassica napus HOM05D006735 ORTHO05D009558 2.9e-08 62.8 59 47.5
C03p60980 Brassica napus HOM05D006735 ORTHO05D009558 3.8e-08 62.4 57 47.4
A07p02010 Brassica napus HOM05D006735 ORTHO05D009558 4.9e-08 62.0 57 45.6
C09p53130 Brassica napus HOM05D006735 ORTHO05D009558 4.9e-08 62.0 57 45.6
BcaB07g33626 Brassica carinata HOM05D011499 ORTHO05D011963 1.4e-07 60.5 63 44.4
CARHR117250 Cardamine hirsuta HOM05D000477 ORTHO05D000338 1.9e-07 60.1 53 49.1
A10p02300 Brassica napus HOM05D006735 ORTHO05D009558 2.4e-07 59.7 57 42.1
C08p49000 Brassica napus HOM05D006735 ORTHO05D009558 2.4e-07 59.7 57 42.1
BolC9t58189H Brassica oleracea HOM05D006735 ORTHO05D009558 1.2e-06 57.4 52 46.2
BcaB01g02453 Brassica carinata HOM05D011499 ORTHO05D011963 2.7e-06 56.2 63 41.3
C06p06100 Brassica napus HOM05D006735 ORTHO05D009558 3.5e-06 55.8 57 40.4
C01p27580 Brassica napus HOM05D006735 ORTHO05D009558 6.0e-06 55.1 52 42.3
C02p38090 Brassica napus HOM05D006735 ORTHO05D009558 6.0e-06 55.1 52 42.3
C03p71260 Brassica napus HOM05D006735 ORTHO05D009558 6.0e-06 55.1 52 42.3
C06p04290 Brassica napus HOM05D006735 ORTHO05D009558 6.0e-06 55.1 52 42.3
BcaB04g17658 Brassica carinata HOM05D011499 ORTHO05D011963 7.8e-06 54.7 52 46.2


User provided reference genes

Program Settings