Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G31480 Arabidopsis lyrata HOM05D013039 ORTHO05D014751 3.3e-23 111.3 76 100.0
AT3G18250 Arabidopsis thaliana HOM05D013039 ORTHO05D014751 4.7e-22 107.5 75 93.3
Carub.0003s1801 Capsella rubella HOM05D013039 ORTHO05D014751 4.3e-15 84.3 56 80.4
CARHR093600 Cardamine hirsuta HOM05D013039 ORTHO05D014751 1.2e-14 82.8 54 79.6
Sp3g16370 Schrenkiella parvula HOM05D013039 ORTHO05D014751 1.2e-14 82.8 75 73.3
BraA01t03687Z Brassica rapa HOM05D013039 ORTHO05D014751 1.8e-13 79.0 75 64.0
BcaC09g48782 Brassica carinata HOM05D013039 ORTHO05D014751 5.2e-13 77.4 75 62.7
BolC1t04560H Brassica oleracea HOM05D013039 ORTHO05D014751 5.2e-13 77.4 75 62.7
Thhalv10022120m.g Eutrema salsugineum HOM05D013039 ORTHO05D014751 8.9e-13 76.6 75 74.7
BcaB04g20782 Brassica carinata HOM05D013039 ORTHO05D014751 5.8e-12 73.9 56 73.2
A05p31400 Brassica napus HOM05D013039 ORTHO05D014751 1.6e-09 65.9 52 67.3
BraA05t21979Z Brassica rapa HOM05D013039 ORTHO05D014751 1.6e-09 65.9 52 67.3
Aa31LG8G5100 Aethionema arabicum HOM05D013039 ORTHO05D014751 1.1e-07 59.7 75 50.7


User provided reference genes

Program Settings