Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G31080 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 5.7e-195 684.1 355 100.0
AT3G17910 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 1.3e-183 646.4 355 93.8
CARHR093240 Cardamine hirsuta HOM05D005585 ORTHO05D006905 1.1e-166 590.1 355 82.8
Sp3g16030 Schrenkiella parvula HOM05D005585 ORTHO05D006905 8.9e-164 580.5 355 81.1
Carub.0003s1764 Capsella rubella HOM05D005585 ORTHO05D006905 5.8e-163 577.8 355 86.2
Thhalv10021015m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 1.7e-162 576.2 357 79.6
BcaC05g28739 Brassica carinata HOM05D005585 ORTHO05D006905 1.0e-159 567.0 354 79.9
BolC5t33576H Brassica oleracea HOM05D005585 ORTHO05D006905 1.0e-159 567.0 354 79.9
C05p48400 Brassica napus HOM05D005585 ORTHO05D006905 9.5e-158 560.5 357 79.3
Aa31LG8G4780 Aethionema arabicum HOM05D005585 ORTHO05D006905 3.6e-157 558.5 356 76.7
BraA05t22021Z Brassica rapa HOM05D005585 ORTHO05D006905 6.2e-157 557.8 357 78.4
A05p31890 Brassica napus HOM05D005585 ORTHO05D006905 1.4e-156 556.6 357 78.2
BraA01t03712Z Brassica rapa HOM05D005585 ORTHO05D006905 3.1e-156 555.4 357 77.9
A01p36480 Brassica napus HOM05D005585 ORTHO05D006905 1.7e-154 549.7 355 77.5
BcaC09g48755 Brassica carinata HOM05D005585 ORTHO05D006905 8.3e-154 547.4 355 76.9
BcaB04g20808 Brassica carinata HOM05D005585 ORTHO05D006905 7.1e-153 544.3 356 76.1
C01p46240 Brassica napus HOM05D005585 ORTHO05D006905 2.7e-152 542.3 357 76.5
BolC1t04585H Brassica oleracea HOM05D005585 ORTHO05D006905 2.7e-152 542.3 357 76.5
BcaB06g25853 Brassica carinata HOM05D005585 ORTHO05D006905 3.9e-151 538.5 359 77.2
THA.LOC104821828 Tarenaya hassleriana HOM05D005585 ORTHO05D006905 8.4e-130 467.6 291 76.6
Manes.06G004600 Manihot esculenta HOM05D005585 ORTHO05D006905 5.5e-113 411.8 359 58.2
CSS0043300 Camellia sinensis var. sinensis HOM05D005585 ORTHO05D006905 1.3e-111 407.1 288 66.3
Dinv20235 Davidia involucrata HOM05D005585 ORTHO05D006905 5.1e-111 405.2 291 65.3
Cc04_g06090 Coffea canephora HOM05D005585 ORTHO05D006905 2.5e-110 402.9 290 66.6
QL10p030702 Quercus lobata HOM05D005585 ORTHO05D006905 7.4e-110 401.4 284 66.2
CiPaw.15G144600 Carya illinoinensis HOM05D005585 ORTHO05D006905 3.7e-109 399.1 292 66.1
TAR628G0421 Trochodendron aralioides HOM05D005585 ORTHO05D006905 8.2e-109 397.9 291 66.0
FAN08G0665 Fragaria x ananassa HOM05D005585 ORTHO05D006905 1.4e-108 397.1 355 56.1
RcHm_v2.0_Chr7g0178161 Rosa chinensis HOM05D005585 ORTHO05D006905 6.9e-108 394.8 353 57.8
Phvul.004G149700 Phaseolus vulgaris HOM05D005585 ORTHO05D006905 9.0e-108 394.4 292 64.0
FvH4_5g17500 Fragaria vesca HOM05D005585 ORTHO05D006905 2.0e-107 393.3 353 56.1
Potri.012G045200 Populus trichocarpa HOM05D005585 ORTHO05D006905 4.5e-107 392.1 290 63.1
Thecc.03G059000 Theobroma cacao HOM05D005585 ORTHO05D006905 4.5e-107 392.1 354 54.8
Migut.I00267 Erythranthe guttata HOM05D005585 ORTHO05D006905 1.0e-106 391.0 355 57.5
COL.COLO4_28892 Corchorus olitorius HOM05D005585 ORTHO05D006905 2.2e-106 389.8 293 62.8
PGSC0003DMG400005757 Solanum tuberosum HOM05D005585 ORTHO05D006905 2.2e-106 389.8 295 64.1
Glyma.07G103200 Glycine max HOM05D005585 ORTHO05D006905 2.9e-106 389.4 287 64.5
CANSAT80G2587 Cannabis sativa HOM05D005585 ORTHO05D006905 3.8e-106 389.0 336 55.1
Hma1.2p1_0163F.1_g072970 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 5.0e-106 388.7 289 63.7
Psat1g030240 Pisum sativum HOM05D005585 ORTHO05D006905 5.0e-106 388.7 289 64.7
AUR62001019 Chenopodium quinoa HOM05D005585 ORTHO05D006905 6.5e-106 388.3 280 65.4
PGR044G1909 Punica granatum HOM05D005585 ORTHO05D006905 1.1e-105 387.5 353 58.1
CANSAT80G1087 Cannabis sativa HOM05D005585 ORTHO05D006905 1.9e-105 386.7 336 55.1
TWI60G0738 Tripterygium wilfordii HOM05D005585 ORTHO05D006905 1.9e-105 386.7 368 54.6
Nn5g30598 Nelumbo nucifera HOM05D005585 ORTHO05D006905 4.2e-105 385.6 293 62.1
Medtr6g069850 Medicago truncatula HOM05D005585 ORTHO05D006905 7.2e-105 384.8 289 62.6
Ca_25346_v3 Cicer arietinum L. HOM05D005585 ORTHO05D006905 9.4e-105 384.4 289 64.7
Gohir.A09G175000 Gossypium hirsutum HOM05D005585 ORTHO05D006905 9.4e-105 384.4 291 63.6
MSTRG.6190 Avicennia marina HOM05D005585 ORTHO05D006905 1.6e-104 383.6 354 55.4
Eucgr.B00886 Eucalyptus grandis HOM05D005585 ORTHO05D006905 2.1e-104 383.3 330 60.3
TPR.G8624 Trifolium pratense HOM05D005585 ORTHO05D006905 2.1e-104 383.3 290 64.8
Lalb_Chr14g0370621 Lupinus albus HOM05D005585 ORTHO05D006905 2.7e-104 382.9 285 64.2
Duzib068G1453 Durio zibethinus HOM05D005585 ORTHO05D006905 3.6e-104 382.5 292 64.0
Sed0009200 Sechium edule HOM05D005585 ORTHO05D006905 3.6e-104 382.5 290 62.1
GSVIVG01008457001 Vitis vinifera HOM05D005585 ORTHO05D006905 4.6e-104 382.1 293 63.5
CsaV3_1G007220 Cucumis sativus L. HOM05D005585 ORTHO05D006905 1.0e-103 380.9 292 62.3
Gorai.006G191400 Gossypium raimondii HOM05D005585 ORTHO05D006905 1.4e-103 380.6 291 63.6
Hund22311 Selenicereus undatus HOM05D005585 ORTHO05D006905 1.4e-103 380.6 365 55.6
Rhsim08G0150200 Rhododendron simsii HOM05D005585 ORTHO05D006905 3.0e-103 379.4 334 57.2
MD06G1228400 Malus domestica HOM05D005585 ORTHO05D006905 3.9e-103 379.0 291 60.8
Aqoxy5G00867 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 5.1e-103 378.6 294 62.2
MELO3C002139.2 Cucumis melo HOM05D005585 ORTHO05D006905 5.1e-103 378.6 292 61.6
MD14G1237600 Malus domestica HOM05D005585 ORTHO05D006905 5.1e-103 378.6 285 62.5
HanXRQChr06g0178071 Helianthus annuus HOM05D005585 ORTHO05D006905 1.1e-102 377.5 344 61.9
Prupe.5G234900 Prunus persica HOM05D005585 ORTHO05D006905 1.1e-102 377.5 354 54.0
Ciclev10015784m.g Citrus clementina HOM05D005585 ORTHO05D006905 2.0e-102 376.7 297 62.3
Lj2g0015776 Lotus japonicus HOM05D005585 ORTHO05D006905 2.0e-102 376.7 287 62.0
Lsat_1_v5_gn_8_83620 Lactuca sativa HOM05D005585 ORTHO05D006905 3.3e-102 375.9 287 65.5
ECA236G2254 Erigeron canadensis HOM05D005585 ORTHO05D006905 1.3e-101 374.0 285 63.2
Lalb_Chr22g0353511 Lupinus albus HOM05D005585 ORTHO05D006905 1.7e-101 373.6 279 63.8
arahy.Tifrunner.gnm1.ann1.8TLB5V Arachis hypogaea HOM05D005585 ORTHO05D006905 2.8e-101 372.9 289 61.6
Oeu026263.1 Olea europaea HOM05D005585 ORTHO05D006905 4.8e-101 372.1 270 63.0
Nitab4.5_0001264g0050 Nicotiana tabacum HOM05D005585 ORTHO05D006905 1.4e-100 370.5 357 54.9
Solyc03g118610.4 Solanum lycopersicum HOM05D005585 ORTHO05D006905 4.1e-100 369.0 285 62.5
SalBow7G1179 Salvia bowleyana HOM05D005585 ORTHO05D006905 2.0e-99 366.7 292 61.3
DCAR_003540 Daucus carota HOM05D005585 ORTHO05D006905 2.6e-99 366.3 289 61.9
vmacro08951 Vaccinium macrocarpon HOM05D005585 ORTHO05D006905 3.4e-99 365.9 376 52.7
Haze_18886 Corylus avellana HOM05D005585 ORTHO05D006905 4.5e-99 365.5 271 62.4
ClCG04G010560 Citrullus lanatus HOM05D005585 ORTHO05D006905 5.9e-99 365.2 358 53.9
Sopen03g037560 Solanum pennellii HOM05D005585 ORTHO05D006905 2.2e-98 363.2 285 61.8
FAN04G2668 Fragaria x ananassa HOM05D005585 ORTHO05D006905 1.4e-97 360.5 331 54.1
PSO017G0826 Papaver somniferum HOM05D005585 ORTHO05D006905 5.5e-97 358.6 295 59.3
EL10Ac4g09125 Beta vulgaris HOM05D005585 ORTHO05D006905 1.2e-96 357.5 333 55.0
PSO170G1171 Papaver somniferum HOM05D005585 ORTHO05D006905 2.1e-96 356.7 296 58.8
FAN18G2151 Fragaria x ananassa HOM05D005585 ORTHO05D006905 1.0e-95 354.4 261 62.8
ATR1153G069 Amborella trichopoda HOM05D005585 ORTHO05D006905 6.7e-95 351.7 290 58.3
arahy.Tifrunner.gnm1.ann1.E1YKD2 Arachis hypogaea HOM05D005585 ORTHO05D006905 6.7e-95 351.7 264 61.7
Sc12g0007980 Simmondsia chinensis HOM05D005585 ORTHO05D006905 7.4e-94 348.2 268 61.6
Os03g0200700 Oryza sativa ssp. japonica HOM05D005585 ORTHO05D006905 1.8e-92 343.6 293 57.3
Sabra12G0031400 Salix brachista HOM05D005585 ORTHO05D006905 1.0e-90 337.8 294 56.5
Aqoxy5G00865 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 1.3e-90 337.4 261 62.1
VMungo0464G1491 Vigna mungo HOM05D005585 ORTHO05D006905 2.5e-89 333.2 245 63.3
Glyma.09G174400 Glycine max HOM05D005585 ORTHO05D006905 5.5e-89 332.0 248 62.9
Nitab4.5_0010397g0010 Nicotiana tabacum HOM05D005585 ORTHO05D006905 7.2e-89 331.6 345 50.1
TAR628G1367 Trochodendron aralioides HOM05D005585 ORTHO05D006905 7.2e-89 331.6 230 69.1
HPP92_019169 Vanilla planifolia HOM05D005585 ORTHO05D006905 1.2e-88 330.9 283 55.8
CDE04G0750 Ceratophyllum demersum HOM05D001130 ORTHO05D006905 2.1e-88 330.1 300 56.3
Lj5C159G17 Lonicera japonica HOM05D005585 ORTHO05D006905 2.7e-88 329.7 244 65.2
Peaxi162Scf00314g00335 Petunia axillaris HOM05D005585 ORTHO05D006905 2.3e-87 326.6 255 62.4
unitig_27.g25108 Utricularia gibba HOM05D005585 ORTHO05D006905 3.7e-85 319.3 282 56.7
Ah.06g192310 Amaranthus hybridus HOM05D005585 ORTHO05D008527 2.6e-83 313.2 253 58.9
CAN.G843.48 Capsicum annuum HOM05D005585 ORTHO05D006905 1.9e-81 307.0 294 54.1
Zm00001eb007820 Zea mays HOM05D005585 ORTHO05D006905 1.8e-79 300.4 254 57.9
AUR62004935 Chenopodium quinoa HOM05D005585 ORTHO05D006905 5.2e-79 298.9 222 62.6
Hma1.2p1_0163F.1_g072980 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 8.8e-79 298.1 225 61.8
Cpa.g.c34889 Carica papaya HOM05D005585 ORTHO05D006905 2.0e-78 297.0 221 65.2
QL12p007232 Quercus lobata HOM05D005585 ORTHO05D006905 7.0e-76 288.5 399 41.9
Mapoly0094s0071 Marchantia polymorpha HOM05D005585 ORTHO05D006905 4.8e-69 265.8 292 48.3
Eucgr.B00986 Eucalyptus grandis HOM05D005585 ORTHO05D006905 5.4e-68 262.3 198 62.1
CARHR038140 Cardamine hirsuta HOM05D005585 ORTHO05D006905 4.5e-67 259.2 346 44.2
SMO147G0391 Selaginella moellendorffii HOM05D005585 ORTHO05D006905 6.1e-64 248.8 287 43.9
Pp3c5_4480 Physcomitrium patens HOM05D005585 ORTHO05D006905 1.8e-63 247.3 295 44.4
Thhalv10011732m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 4.0e-63 246.1 244 54.5
AL1G55160 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 2.0e-62 243.8 296 47.3
AT1G48510 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 6.6e-58 228.8 288 44.8
Cpa.g.sc3.377 Carica papaya HOM05D005585 ORTHO05D006905 3.3e-57 226.5 303 44.9
BcaB04g20806 Brassica carinata HOM05D005585 ORTHO05D006905 2.1e-56 223.8 178 63.5
Gohir.D09G170128 Gossypium hirsutum HOM05D005585 ORTHO05D006905 8.0e-56 221.9 180 61.1
SEGI_34948 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 1.7e-53 214.2 160 61.9
Carub.0001s3764 Capsella rubella HOM05D005585 ORTHO05D006905 6.4e-53 212.2 342 40.4
SGA_v2.0_scaffold58G20371 Striga asiatica HOM05D005585 ORTHO05D006905 1.2e-51 208.0 163 59.5
Carub.0001s3763 Capsella rubella HOM05D005585 ORTHO05D006905 2.3e-50 203.8 334 39.2
AagrBONN_evm.TU.Sc2ySwM_340.176 Anthoceros agrestis HOM05D005585 ORTHO05D006905 5.6e-49 199.1 251 43.0
BcaB08g34867 Brassica carinata HOM05D005585 ORTHO05D006905 2.2e-45 187.2 237 45.1
CBR_g50834 Chara braunii HOM05D002601 ORTHO05D002884 5.4e-44 182.6 374 32.1
TAR628G1286 Trochodendron aralioides HOM05D005585 ORTHO05D006905 8.6e-42 175.3 130 63.8
PRCOL_00002102 Prasinoderma coloniale HOM05D005585 ORTHO05D006905 4.1e-36 156.4 303 32.0
Zm00001eb338430 Zea mays HOM05D005585 ORTHO05D006905 5.1e-34 149.4 92 69.6
FAN13G1174 Fragaria x ananassa HOM05D005585 ORTHO05D006905 9.6e-33 145.2 169 47.3
Gohir.D09G170071 Gossypium hirsutum HOM05D005585 ORTHO05D006905 4.7e-32 142.9 99 65.7
Zm00001eb099110 Zea mays HOM05D005585 ORTHO05D006905 2.2e-29 134.0 115 56.5
SEGI_19570 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 1.4e-28 131.3 109 54.1
Cre16.g664700 Chlamydomonas reinhardtii HOM05D005585 ORTHO05D006905 7.6e-22 109.0 321 26.5
CBR_g629 Chara braunii HOM05D005585 ORTHO05D006905 1.9e-17 94.4 220 30.9
MCO16G342 Micromonas commoda HOM05D005585 ORTHO05D006905 1.7e-13 81.3 223 27.4
Cfa024306 Carpinus fangiana HOM05D005585 ORTHO05D006905 3.5e-11 73.6 250 26.8
CDE07G0810 Ceratophyllum demersum HOM05D005585 ORTHO05D006905 1.6e-08 64.7 78 46.2


User provided reference genes

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