Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 1.7e-62 242.7 137 100.0
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 2.5e-53 212.2 135 90.4
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 6.9e-48 194.1 134 83.6
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 4.2e-45 184.9 137 81.0
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 1.2e-44 183.3 137 80.3
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 1.6e-44 183.0 137 81.8
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 2.1e-44 182.6 139 80.6
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 4.6e-44 181.4 137 81.8
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 1.0e-43 180.3 137 79.6
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 1.1e-42 176.8 138 79.7
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 8.2e-33 144.1 122 63.9
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 6.1e-28 127.9 135 63.7
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 9.1e-24 114.0 112 57.1
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 1.2e-23 113.6 126 54.8
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 1.2e-23 113.6 110 58.2
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 1.2e-23 113.6 112 58.9
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 1.7e-22 109.8 121 44.6
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 2.9e-22 109.0 121 44.6
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 2.9e-22 109.0 121 44.6
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 1.5e-21 106.7 122 50.0
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 1.9e-21 106.3 126 42.1
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 2.5e-21 105.9 112 55.4
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 3.2e-21 105.5 102 48.0
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 4.2e-21 105.1 120 55.0
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 5.5e-21 104.8 105 56.2
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 5.5e-21 104.8 99 44.4
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 7.2e-21 104.4 99 48.5
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 9.4e-21 104.0 112 53.6
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 9.4e-21 104.0 99 44.4
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 1.2e-20 103.6 133 51.9
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 2.7e-20 102.4 126 42.1
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 3.6e-20 102.1 144 38.9
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 4.7e-20 101.7 130 45.4
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 4.7e-20 101.7 131 46.6
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 6.1e-20 101.3 123 48.8
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 6.1e-20 101.3 118 40.7
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 8.0e-20 100.9 106 59.4
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 1.0e-19 100.5 137 49.6
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 1.4e-19 100.1 118 59.3
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 1.8e-19 99.8 120 50.8
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 3.0e-19 99.0 122 50.0
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 3.0e-19 99.0 99 45.5
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 4.0e-19 98.6 109 53.2
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 5.2e-19 98.2 110 59.1
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 8.8e-19 97.4 100 49.0
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 1.2e-18 97.1 127 48.8
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 1.5e-18 96.7 107 54.2
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 2.0e-18 96.3 112 45.5
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 2.0e-18 96.3 133 37.6
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 2.6e-18 95.9 113 46.0
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 4.4e-18 95.1 113 46.0
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 4.4e-18 95.1 113 49.6
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 4.4e-18 95.1 133 41.4
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 7.5e-18 94.4 99 63.6
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 1.3e-17 93.6 124 38.7
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 1.3e-17 93.6 137 40.1
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 1.3e-17 93.6 99 44.4
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 1.3e-17 93.6 98 64.3
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 1.7e-17 93.2 98 50.0
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 2.2e-17 92.8 114 53.5
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 6.3e-17 91.3 103 56.3
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 8.3e-17 90.9 100 48.0
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 1.4e-16 90.1 127 38.6
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 1.8e-16 89.7 169 34.9
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 3.1e-16 89.0 117 47.0
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 1.2e-15 87.0 131 37.4
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 2.0e-15 86.3 129 38.8
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 3.5e-15 85.5 131 43.5
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 4.5e-15 85.1 91 57.1
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 5.9e-15 84.7 94 43.6
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 5.9e-15 84.7 103 38.8
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 3.8e-14 82.0 99 54.5
A01p36650 Brassica napus HOM05D007737 ORTHO05D009754 5.0e-14 81.6 67 70.1
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 3.2e-13 79.0 91 53.8
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 4.2e-13 78.6 75 62.7
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 2.1e-12 76.3 122 43.4
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 8.0e-12 74.3 93 61.3
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 1.8e-11 73.2 83 38.6
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 1.8e-11 73.2 111 32.4
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 8.8e-11 70.9 85 56.5
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 1.2e-10 70.5 131 47.3
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 1.4e-08 63.5 93 39.8
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 1.4e-08 63.5 59 47.5
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 9.1e-08 60.8 109 45.9
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 2.3e-06 56.2 64 39.1
Pp3c17_5190 Physcomitrium patens HOM05D007737 ORTHO05D009754 5.0e-06 55.1 71 52.1


User provided reference genes

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