Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G30260 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 5.7e-101 370.9 188 100.0
AT3G17225 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 7.4e-85 317.4 188 87.8
AT3G17227 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 1.4e-83 313.2 188 86.2
AT3G17230 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 1.4e-83 313.2 187 85.0
AL3G30270 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 3.8e-73 278.5 186 78.5
Sp3g15410 Schrenkiella parvula HOM05D008745 ORTHO05D010941 2.3e-65 252.7 188 68.6
BcaB06g25813 Brassica carinata HOM05D008745 ORTHO05D010941 4.9e-60 235.0 188 64.9
CARHR092500 Cardamine hirsuta HOM05D008745 ORTHO05D010941 1.8e-59 233.0 188 63.8
Sp3g15450 Schrenkiella parvula HOM05D008745 ORTHO05D010941 5.4e-59 231.5 188 60.6
Thhalv10022084m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 1.2e-58 230.3 171 67.3
Thhalv10021601m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 7.8e-58 227.6 188 61.2
BcaC05g28818 Brassica carinata HOM05D008745 ORTHO05D010941 2.8e-55 219.2 188 61.2
C05p49220 Brassica napus HOM05D008745 ORTHO05D010941 2.8e-55 219.2 188 61.2
Carub.0002s1162 Capsella rubella HOM05D008745 ORTHO05D010941 1.8e-54 216.5 185 61.1
A05p32570 Brassica napus HOM05D008745 ORTHO05D010941 2.3e-54 216.1 188 61.2
BolC5t33663H Brassica oleracea HOM05D008745 ORTHO05D010941 2.3e-54 216.1 188 61.2
Carub.0006s2544 Capsella rubella HOM05D008745 ORTHO05D010941 3.0e-54 215.7 189 62.4
BraA05t22081Z Brassica rapa HOM05D008745 ORTHO05D010941 8.9e-54 214.2 188 60.6
Carub.0002s0897 Capsella rubella HOM05D008745 ORTHO05D010941 4.4e-53 211.8 186 59.7
Sp3g15440 Schrenkiella parvula HOM05D008745 ORTHO05D010941 2.7e-50 202.6 190 56.3
Carub.0006s2723 Capsella rubella HOM05D008745 ORTHO05D010941 1.4e-46 190.3 186 51.6
BcaB04g18935 Brassica carinata HOM05D008745 ORTHO05D010941 1.2e-45 187.2 191 57.1
Carub.0003s2924 Capsella rubella HOM05D008745 ORTHO05D010941 2.0e-45 186.4 186 52.2
BcaB06g25814 Brassica carinata HOM05D008745 ORTHO05D010941 1.1e-43 180.6 185 52.4
A03p40110 Brassica napus HOM05D008745 ORTHO05D010941 9.2e-43 177.6 190 54.7
BcaC01g03777 Brassica carinata HOM05D008745 ORTHO05D010941 1.6e-42 176.8 190 54.2
BraA03t13161Z Brassica rapa HOM05D008745 ORTHO05D010941 2.7e-42 176.0 190 54.2
A05p32510 Brassica napus HOM05D008745 ORTHO05D010941 6.0e-42 174.9 187 49.7
C05p49180 Brassica napus HOM05D008745 ORTHO05D010941 6.0e-42 174.9 187 50.3
BolC3t17147H Brassica oleracea HOM05D008745 ORTHO05D010941 6.0e-42 174.9 192 54.7
BraA05t22077Z Brassica rapa HOM05D008745 ORTHO05D010941 1.7e-41 173.3 187 49.2
C03p48680 Brassica napus HOM05D008745 ORTHO05D010941 3.0e-41 172.6 190 53.7
BcaC05g28814 Brassica carinata HOM05D008745 ORTHO05D010941 8.9e-38 161.0 178 50.0
BolC5t33659H Brassica oleracea HOM05D008745 ORTHO05D010941 4.4e-37 158.7 178 48.9
Sp3g04630 Schrenkiella parvula HOM05D008745 ORTHO05D010941 5.8e-29 131.7 188 39.4
AT2G15345 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 3.5e-26 122.5 119 52.1
Thhalv10022010m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 6.2e-23 111.7 186 36.0
AL3G16450 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 1.4e-22 110.5 181 39.2
BolC1t05672H Brassica oleracea HOM05D008745 ORTHO05D010941 1.8e-22 110.2 188 35.1
BraA01t04492Z Brassica rapa HOM05D008745 ORTHO05D010941 3.2e-19 99.4 181 33.7
AL3G47110 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 4.2e-19 99.0 97 52.6
BcaC09g47846 Brassica carinata HOM05D008745 ORTHO05D010941 1.2e-18 97.4 181 34.8
AT3G05741 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 4.3e-16 89.0 190 31.6
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 1.7e-12 77.0 183 31.1
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 6.7e-09 65.1 173 28.3
QL08p052685 Quercus lobata HOM05D003146 ORTHO05D001819 1.1e-08 64.3 179 28.5
QL08p052692 Quercus lobata HOM05D003146 ORTHO05D001819 1.1e-08 64.3 179 28.5
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 3.3e-08 62.8 143 30.1
QL04p005674 Quercus lobata HOM05D003146 ORTHO05D001819 3.3e-08 62.8 110 35.5
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 5.6e-08 62.0 176 24.4
Actinidia21437 Actinidia chinensis HOM05D003556 ORTHO05D003404 6.2e-07 58.5 170 26.5
AL3G30250 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 1.4e-06 57.4 143 27.3
AT3G17220 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 1.4e-06 57.4 143 27.3
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 1.4e-06 57.4 143 27.3
MBI07_g43317_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D001261 1.4e-06 57.4 158 30.4
QL04p005594 Quercus lobata HOM05D003146 ORTHO05D001819 1.4e-06 57.4 118 29.7
Rhsim06G0181100 Rhododendron simsii HOM05D009438 ORTHO05D001819 1.8e-06 57.0 172 27.9
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.4e-06 56.6 179 26.3
PGR004G2081 Punica granatum HOM05D003146 ORTHO05D001819 2.4e-06 56.6 177 30.5


User provided reference genes

Program Settings