Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G30100 Arabidopsis lyrata HOM05D009836 ORTHO05D012041 1.4e-79 300.1 220 100.0
AT3G17120 Arabidopsis thaliana HOM05D009836 ORTHO05D012041 2.3e-77 292.7 220 98.2
CARHR092370 Cardamine hirsuta HOM05D009836 ORTHO05D012041 1.6e-67 260.0 220 90.5
Carub.0003s1686 Capsella rubella HOM05D009836 ORTHO05D012041 2.7e-62 242.7 222 88.7
Sp3g15340 Schrenkiella parvula HOM05D009836 ORTHO05D012041 8.8e-61 237.7 220 87.3
Thhalv10021463m.g Eutrema salsugineum HOM05D009836 ORTHO05D012041 1.1e-60 237.3 220 88.2
BcaB04g18930 Brassica carinata HOM05D009836 ORTHO05D012041 1.4e-55 220.3 223 83.4
BcaC01g03786 Brassica carinata HOM05D009836 ORTHO05D012041 6.1e-54 214.9 223 77.6
C03p48650 Brassica napus HOM05D009836 ORTHO05D012041 6.1e-54 214.9 223 77.6
A03p40080 Brassica napus HOM05D009836 ORTHO05D012041 1.4e-53 213.8 223 78.0
A01p37180 Brassica napus HOM05D009836 ORTHO05D012041 3.0e-53 212.6 216 80.6
BraA03t13158Z Brassica rapa HOM05D009836 ORTHO05D012041 3.0e-53 212.6 223 77.6
BcaB04g20864 Brassica carinata HOM05D009836 ORTHO05D012041 5.2e-53 211.8 215 80.9
BolC3t17143H Brassica oleracea HOM05D009836 ORTHO05D012041 8.8e-53 211.1 223 70.4
BcaC05g28824 Brassica carinata HOM05D009836 ORTHO05D012041 1.7e-51 206.8 223 82.1
C05p49320 Brassica napus HOM05D009836 ORTHO05D012041 1.7e-51 206.8 223 82.1
BcaC09g48668 Brassica carinata HOM05D009836 ORTHO05D012041 6.3e-51 204.9 216 79.6
C01p47120 Brassica napus HOM05D009836 ORTHO05D012041 6.3e-51 204.9 216 79.6
BolC1t04680H Brassica oleracea HOM05D009836 ORTHO05D012041 1.8e-50 203.4 216 79.2
A05p32620 Brassica napus HOM05D009836 ORTHO05D012041 2.6e-49 199.5 225 80.4
BraA05t22086Z Brassica rapa HOM05D009836 ORTHO05D012041 2.6e-49 199.5 225 80.4
BraA01t03779Z Brassica rapa HOM05D009836 ORTHO05D012041 1.0e-48 197.6 216 78.2
BcaB06g25804 Brassica carinata HOM05D009836 ORTHO05D012041 1.7e-48 196.8 223 76.7
BolC5t33673H Brassica oleracea HOM05D009836 ORTHO05D012041 2.5e-47 193.0 223 76.7
Aa31LG8G4130 Aethionema arabicum HOM05D009836 ORTHO05D012041 1.7e-32 143.7 216 75.0
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 1.2e-09 67.8 87 42.5
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 1.6e-09 67.4 87 43.7
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 1.6e-06 57.4 84 39.3
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 2.1e-06 57.0 96 36.5
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 2.1e-06 57.0 93 37.6
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 4.7e-06 55.8 86 37.2
Thecc.04G304600 Theobroma cacao HOM05D007634 ORTHO05D004310 6.2e-06 55.5 87 37.9


User provided reference genes

Program Settings