Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G29480 Arabidopsis lyrata HOM05D008252 ORTHO05D011866 9.5e-278 959.5 480 100.0
AL3G39130 Arabidopsis lyrata HOM05D008252 ORTHO05D011866 1.3e-144 517.3 339 79.1
AL2G10340 Arabidopsis lyrata HOM05D008252 ORTHO05D011866 2.8e-120 436.4 459 56.4
Carub.0004s2077 Capsella rubella HOM05D008252 ORTHO05D011866 2.0e-118 430.3 458 55.0
Carub.0002s0047 Capsella rubella HOM05D008252 ORTHO05D011866 1.0e-109 401.4 483 52.4
Sp1g31080 Schrenkiella parvula HOM05D008252 ORTHO05D011866 5.5e-108 395.6 469 50.7
CARHR292080 Cardamine hirsuta HOM05D008252 ORTHO05D011866 1.6e-107 394.0 481 50.5
BolC2t12374H Brassica oleracea HOM05D008252 ORTHO05D011866 2.3e-106 390.2 440 51.1
BcaB07g30392 Brassica carinata HOM05D008252 ORTHO05D011866 5.1e-106 389.0 481 48.4
C02p49660 Brassica napus HOM05D008252 ORTHO05D011866 1.3e-104 384.4 471 49.7
BcaC03g17048 Brassica carinata HOM05D008252 ORTHO05D011866 6.3e-104 382.1 471 49.5
A02p32120 Brassica napus HOM05D008252 ORTHO05D011866 4.5e-102 375.9 471 48.2
A02p43040 Brassica napus HOM05D008252 ORTHO05D011866 2.1e-99 367.1 473 46.5
BcaC03g18231 Brassica carinata HOM05D008252 ORTHO05D011866 2.7e-99 366.7 424 50.2
C03p26460 Brassica napus HOM05D008252 ORTHO05D011866 1.8e-98 364.0 473 47.8
C02p63000 Brassica napus HOM05D008252 ORTHO05D011866 6.7e-98 362.1 472 46.6
Carub.0002s0028 Capsella rubella HOM05D008252 ORTHO05D011866 1.6e-86 324.3 438 45.0
CARHR052650 Cardamine hirsuta HOM05D008252 ORTHO05D011866 1.4e-74 284.6 478 41.2
BraA02t08226Z Brassica rapa HOM05D008252 ORTHO05D011866 1.8e-63 247.7 388 40.7
BcaC03g17049 Brassica carinata HOM05D008252 ORTHO05D011866 1.4e-58 231.5 451 36.8
Thhalv10023974m.g Eutrema salsugineum HOM05D008252 ORTHO05D016722 1.6e-54 218.0 199 58.3
C02p49670 Brassica napus HOM05D008252 ORTHO05D011866 1.5e-52 211.5 366 38.5
CARHR078100 Cardamine hirsuta HOM05D008252 ORTHO05D011866 3.7e-48 196.8 179 58.1
BcaB06g29196 Brassica carinata HOM05D008252 ORTHO05D016722 1.4e-47 194.9 266 46.2
Sp6g04270 Schrenkiella parvula HOM05D008252 ORTHO05D016722 7.3e-44 182.6 184 55.4
Thhalv10024117m.g Eutrema salsugineum HOM05D008252 ORTHO05D016722 8.9e-42 175.6 173 52.0
BolC4t28412H Brassica oleracea HOM05D008252 ORTHO05D016722 4.9e-40 169.9 253 43.1
Thhalv10014714m.g Eutrema salsugineum HOM05D008252 ORTHO05D011866 3.9e-37 160.2 197 47.2
BcaB02g09764 Brassica carinata HOM05D008252 ORTHO05D011866 3.8e-32 143.7 178 47.8
BcaB06g29195 Brassica carinata HOM05D008252 ORTHO05D016722 9.3e-31 139.0 180 45.0
BcaC02g07300 Brassica carinata HOM05D008252 ORTHO05D016722 9.3e-31 139.0 180 45.0
Sp2g00360 Schrenkiella parvula HOM05D008252 ORTHO05D011866 2.3e-29 134.4 342 32.2
AL1G50150 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 5.1e-29 133.3 170 48.8
AL1G50210 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 3.3e-28 130.6 218 41.3
BolC2t11047H Brassica oleracea HOM05D008252 ORTHO05D011866 7.3e-28 129.4 284 35.2
AL1G50190 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 1.1e-26 125.6 220 39.5
AL1G50170 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 1.8e-26 124.8 219 40.6
Carub.0001s3301 Capsella rubella HOM05D008252 ORTHO05D011960 1.8e-26 124.8 239 38.9
BraA05t21794Z Brassica rapa HOM05D008252 ORTHO05D011960 1.5e-25 121.7 195 42.1
AT3G27900 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 2.6e-25 120.9 210 39.0
Thhalv10001856m.g Eutrema salsugineum HOM05D008252 ORTHO05D011960 2.6e-25 120.9 198 41.4
AL1G50220 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 3.4e-25 120.6 213 39.0
A05p29110 Brassica napus HOM05D008252 ORTHO05D011960 7.6e-25 119.4 194 41.8
Carub.0001s3300 Capsella rubella HOM05D008252 ORTHO05D011960 9.9e-25 119.0 168 47.0
AL1G50110 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 1.3e-24 118.6 163 43.6
AL1G50120 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 1.3e-24 118.6 196 38.8
Carub.0001s3298 Capsella rubella HOM05D008252 ORTHO05D011960 6.4e-24 116.3 172 40.1
BcaC05g28344 Brassica carinata HOM05D008252 ORTHO05D011960 8.4e-24 115.9 194 40.2
C05p44090 Brassica napus HOM05D008252 ORTHO05D011960 8.4e-24 115.9 194 40.7
Thhalv10001845m.g Eutrema salsugineum HOM05D008252 ORTHO05D011960 8.4e-24 115.9 201 38.3
BolC5t33176H Brassica oleracea HOM05D001339 ORTHO05D003609 1.9e-23 114.8 232 35.3
BolC5t33132H Brassica oleracea HOM05D008252 ORTHO05D011960 3.2e-23 114.0 171 43.3
C05p44520 Brassica napus HOM05D001339 ORTHO05D003609 2.1e-22 111.3 186 41.4
BcaC05g28373 Brassica carinata HOM05D008252 ORTHO05D011960 1.3e-21 108.6 186 40.3
AT1G34560 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 3.9e-21 107.1 194 37.6
BcaB06g29193 Brassica carinata HOM05D008252 ORTHO05D016722 2.1e-19 101.3 125 43.2
BcaC02g07301 Brassica carinata HOM05D008252 ORTHO05D016722 2.1e-19 101.3 124 43.5
AT1G35353 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 9.3e-15 85.9 244 30.3
A05p28690 Brassica napus HOM05D008252 ORTHO05D011960 2.3e-13 81.3 200 32.0
BraA04t18630Z Brassica rapa HOM05D008252 ORTHO05D016722 4.5e-09 67.0 90 46.7
AL2G10320 Arabidopsis lyrata HOM05D008252 ORTHO05D011866 5.8e-09 66.6 79 54.4
AT1G35410 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 4.9e-08 63.5 204 29.4
AT1G35400 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 2.5e-07 61.2 168 29.2


User provided reference genes

Program Settings