Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G29340 Arabidopsis lyrata HOM05D000100 ORTHO05D080646 2.7e-21 104.4 51 100.0
A05p32990 Brassica napus HOM05D000100 ORTHO05D000052 2.0e-08 61.6 43 72.1
BraA05t22125Z Brassica rapa HOM05D000100 ORTHO05D000052 2.0e-08 61.6 43 72.1
Carub.0003s1627 Capsella rubella HOM05D000100 ORTHO05D000052 3.4e-08 60.8 43 69.8
CARHR091730 Cardamine hirsuta HOM05D000100 ORTHO05D000052 4.4e-08 60.5 43 69.8
Sp3g14870 Schrenkiella parvula HOM05D000100 ORTHO05D000052 4.4e-08 60.5 43 69.8
Thhalv10020674m.g Eutrema salsugineum HOM05D000100 ORTHO05D000052 9.9e-08 59.3 43 69.8
BcaB06g25754 Brassica carinata HOM05D000100 ORTHO05D000052 1.7e-07 58.5 43 67.4
BcaB06g25755 Brassica carinata HOM05D000100 ORTHO05D000052 1.7e-07 58.5 43 67.4
Thhalv10018509m.g Eutrema salsugineum HOM05D000100 ORTHO05D000052 1.7e-07 58.5 43 67.4
THA.LOC104820255 Tarenaya hassleriana HOM05D000100 ORTHO05D000052 2.9e-07 57.8 43 62.8
Sp5g21070 Schrenkiella parvula HOM05D000100 ORTHO05D000052 3.8e-07 57.4 43 67.4
CANSAT21G1053 Cannabis sativa HOM05D000100 ORTHO05D000052 4.9e-07 57.0 45 62.2
AT3G16520 Arabidopsis thaliana HOM05D000100 ORTHO05D000052 6.4e-07 56.6 43 65.1
CANSAT35G0375 Cannabis sativa HOM05D000100 ORTHO05D000052 6.4e-07 56.6 45 62.2
FvH4_1g30110 Fragaria vesca HOM05D000100 ORTHO05D000052 6.4e-07 56.6 43 62.8
FAN19G1572 Fragaria x ananassa HOM05D000100 ORTHO05D000052 6.4e-07 56.6 43 62.8
FAN26G2474 Fragaria x ananassa HOM05D000100 ORTHO05D000052 6.4e-07 56.6 43 62.8
FAN10G0799 Fragaria x ananassa HOM05D001916 ORTHO05D003272 8.4e-07 56.2 43 62.8
CANSAT35G0448 Cannabis sativa HOM05D000100 ORTHO05D000052 1.1e-06 55.8 45 62.2
Haze_00067 Corylus avellana HOM05D000100 ORTHO05D000052 1.1e-06 55.8 43 58.1
FAN10G0530 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.1e-06 55.8 43 60.5
FAN10G1455 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.1e-06 55.8 43 60.5
FAN28G1892 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.1e-06 55.8 43 62.8
BolC5t33729H Brassica oleracea HOM05D000100 ORTHO05D000052 1.4e-06 55.5 43 62.8
FAN10G0131 Fragaria x ananassa HOM05D001916 ORTHO05D003272 1.4e-06 55.5 43 60.5
MD07G1281000 Malus domestica HOM05D000100 ORTHO05D000052 1.4e-06 55.5 43 60.5
Actinidia08593 Actinidia chinensis HOM05D000100 ORTHO05D000052 1.9e-06 55.1 43 60.5
AL3G29350 Arabidopsis lyrata HOM05D000100 ORTHO05D000052 1.9e-06 55.1 43 62.8
Cfa016310 Carpinus fangiana HOM05D000100 ORTHO05D000052 1.9e-06 55.1 43 58.1
Potri.004G070000 Populus trichocarpa HOM05D000100 ORTHO05D000052 1.9e-06 55.1 43 60.5
Potri.004G070900 Populus trichocarpa HOM05D000100 ORTHO05D000052 1.9e-06 55.1 43 60.5
Potri.004G071000 Populus trichocarpa HOM05D000100 ORTHO05D000052 1.9e-06 55.1 43 60.5
RcHm_v2.0_Chr1g0378931 Rosa chinensis HOM05D000100 ORTHO05D000052 1.9e-06 55.1 43 60.5
Aa31LG8G3660 Aethionema arabicum HOM05D000100 ORTHO05D000052 2.4e-06 54.7 43 60.5
Haze_00068 Corylus avellana HOM05D000100 ORTHO05D000052 2.4e-06 54.7 43 58.1
FvH4_7g30500 Fragaria vesca HOM05D000100 ORTHO05D000052 2.4e-06 54.7 43 60.5
FAN06G1878 Fragaria x ananassa HOM05D000100 ORTHO05D000052 2.4e-06 54.7 43 60.5
FAN06G4830 Fragaria x ananassa HOM05D000100 ORTHO05D000052 2.4e-06 54.7 43 62.8
MD01G1210600 Malus domestica HOM05D000100 ORTHO05D000052 2.4e-06 54.7 43 60.5
Potri.004G069600 Populus trichocarpa HOM05D000100 ORTHO05D000052 2.4e-06 54.7 43 60.5
Potri.004G069800 Populus trichocarpa HOM05D000100 ORTHO05D000052 2.4e-06 54.7 43 60.5
FAN06G4366 Fragaria x ananassa HOM05D000100 ORTHO05D000052 3.2e-06 54.3 43 60.5
TWI39G0668 Tripterygium wilfordii HOM05D000100 ORTHO05D000052 4.2e-06 53.9 43 55.8
AUR62021089 Chenopodium quinoa HOM05D000100 ORTHO05D000052 5.4e-06 53.5 43 58.1
AUR62031444 Chenopodium quinoa HOM05D000100 ORTHO05D000052 5.4e-06 53.5 43 58.1
FAN01G2593 Fragaria x ananassa HOM05D000100 ORTHO05D000052 5.4e-06 53.5 43 58.1
RcHm_v2.0_Chr1g0378901 Rosa chinensis HOM05D000100 ORTHO05D000052 5.4e-06 53.5 41 61.0
BcaNung06441 Brassica carinata HOM05D000100 ORTHO05D000052 7.1e-06 53.1 43 60.5
C05p49780 Brassica napus HOM05D000100 ORTHO05D000052 7.1e-06 53.1 43 60.5
MD07G1280800 Malus domestica HOM05D000100 ORTHO05D000052 7.1e-06 53.1 43 58.1
Ah.01g017450 Amaranthus hybridus HOM05D000100 ORTHO05D000052 9.3e-06 52.8 43 53.5
Gohir.A02G104400 Gossypium hirsutum HOM05D000100 ORTHO05D000052 9.3e-06 52.8 55 47.3
MD01G1210700 Malus domestica HOM05D000100 ORTHO05D000052 9.3e-06 52.8 43 58.1
Thecc.03G186700 Theobroma cacao HOM05D000100 ORTHO05D000052 9.3e-06 52.8 43 53.5


User provided reference genes

Program Settings