Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 3.6e-157 558.1 269 100.0
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 9.1e-153 543.5 269 96.7
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 1.4e-148 529.6 269 94.4
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 5.2e-148 527.7 270 94.1
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 2.0e-147 525.8 269 93.7
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 4.4e-147 524.6 269 93.3
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 1.7e-146 522.7 269 92.9
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 1.7e-146 522.7 269 92.9
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 8.3e-146 520.4 269 92.6
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 2.7e-144 515.4 268 91.8
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 1.7e-143 512.7 270 91.5
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 2.9e-143 511.9 269 91.8
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 3.8e-143 511.5 269 91.8
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 1.2e-141 506.5 270 90.7
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 2.1e-141 505.8 269 89.2
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 2.1e-141 505.8 270 90.7
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 2.4e-137 492.3 270 88.5
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 1.9e-134 482.6 289 82.0
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 7.3e-118 427.6 275 74.9
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 3.6e-109 398.7 273 69.2
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 1.4e-108 396.7 269 70.3
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 2.0e-107 392.9 273 70.0
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 5.8e-107 391.3 282 68.8
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 4.9e-106 388.3 275 69.1
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 5.4e-105 384.8 266 68.8
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 5.4e-105 384.8 275 68.4
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 7.1e-105 384.4 280 65.7
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 1.2e-104 383.6 271 68.6
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 2.1e-104 382.9 257 69.6
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 3.5e-104 382.1 269 66.9
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 3.5e-104 382.1 249 70.7
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 6.0e-104 381.3 220 77.3
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 1.0e-103 380.6 283 66.1
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 1.3e-103 380.2 220 76.8
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 1.3e-103 380.2 215 77.7
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 2.3e-103 379.4 220 76.4
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 6.6e-103 377.9 272 66.9
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 2.5e-102 375.9 280 67.1
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 2.5e-102 375.9 216 75.5
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 4.3e-102 375.2 280 65.4
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 9.6e-102 374.0 286 63.6
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 2.8e-101 372.5 256 67.6
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 3.6e-101 372.1 279 64.2
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 4.8e-101 371.7 283 65.7
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 6.2e-101 371.3 282 62.8
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 6.2e-101 371.3 276 63.4
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.1e-100 370.5 283 65.0
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 1.1e-100 370.5 284 62.0
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 1.4e-100 370.2 286 62.6
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.4e-100 370.2 279 62.4
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 1.4e-100 370.2 276 63.0
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 1.4e-100 370.2 285 64.6
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 1.8e-100 369.8 280 66.1
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 2.4e-100 369.4 249 67.1
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 3.1e-100 369.0 239 69.9
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 3.1e-100 369.0 277 64.6
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 4.0e-100 368.6 272 64.0
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 6.9e-100 367.9 241 68.9
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 9.0e-100 367.5 261 65.9
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 9.0e-100 367.5 279 63.1
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 1.2e-99 367.1 282 62.4
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 1.5e-99 366.7 281 63.7
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 1.5e-99 366.7 256 67.2
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.5e-99 366.7 280 64.3
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 1.5e-99 366.7 279 63.4
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.0e-99 366.3 266 66.2
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 2.6e-99 365.9 279 63.4
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 2.6e-99 365.9 283 61.1
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 3.4e-99 365.5 287 62.7
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 4.5e-99 365.2 272 64.0
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 4.5e-99 365.2 275 62.5
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 5.8e-99 364.8 283 64.0
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 7.6e-99 364.4 279 63.4
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 9.9e-99 364.0 274 63.5
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.3e-98 363.6 264 63.6
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 8.4e-98 360.9 278 64.0
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 2.4e-97 359.4 282 59.9
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 3.2e-97 359.0 270 64.4
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 3.2e-97 359.0 266 63.9
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 3.2e-97 359.0 269 65.1
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 5.4e-97 358.2 213 73.7
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 9.3e-97 357.5 305 59.7
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 9.3e-97 357.5 281 64.1
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 1.2e-96 357.1 274 62.8
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.3e-95 353.6 277 63.2
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 5.1e-95 351.7 225 68.4
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 5.6e-94 348.2 279 60.2
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 5.6e-94 348.2 278 59.7
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 2.1e-93 346.3 209 71.3
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 2.8e-93 345.9 208 72.6
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 3.6e-93 345.5 278 59.7
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 2.4e-92 342.8 269 61.3
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 4.0e-92 342.0 271 60.1
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 1.2e-91 340.5 278 60.8
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 2.0e-91 339.7 208 72.6
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 4.5e-91 338.6 195 75.9
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 9.9e-91 337.4 279 58.8
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 2.2e-90 336.3 204 71.6
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 7.1e-89 331.3 277 58.5
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 9.3e-89 330.9 287 58.9
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 4.0e-84 315.5 218 65.6
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 5.5e-81 305.1 210 65.7
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 1.8e-79 300.1 259 56.8
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 1.5e-75 287.0 230 55.7
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 1.4e-73 280.4 281 54.4
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 4.6e-72 275.4 205 66.3
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.3e-69 267.3 222 52.7
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 3.7e-69 265.8 209 64.1
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 3.7e-69 265.8 143 79.7
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 4.1e-68 262.3 252 49.2
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 5.3e-68 261.9 202 55.4
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 2.0e-67 260.0 223 53.4
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 2.1e-64 250.0 204 54.4
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 3.6e-64 249.2 147 76.2
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 7.9e-56 221.5 240 51.7
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.0e-55 219.5 227 49.3
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 1.3e-53 214.2 146 63.0
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 2.7e-48 196.4 277 43.7
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 3.1e-44 183.0 171 54.4
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 9.1e-44 181.4 163 58.9
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 7.2e-33 145.2 150 52.7
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 3.0e-23 113.2 184 39.1
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 4.4e-22 109.4 69 65.2
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 3.1e-15 86.7 55 70.9
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 1.2e-11 74.7 37 83.8


User provided reference genes

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