Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G28440 Arabidopsis lyrata HOM05D007722 ORTHO05D009730 2.7e-40 168.7 118 100.0
AT3G15780 Arabidopsis thaliana HOM05D007722 ORTHO05D009730 4.7e-29 131.3 118 84.7
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 2.0e-27 125.9 118 68.6
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 7.1e-25 117.5 120 65.8
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 1.3e-23 113.2 120 65.8
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 2.3e-23 112.5 118 56.8
A05p33600 Brassica napus HOM05D000020 ORTHO05D000543 6.9e-20 100.9 96 67.7
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 3.8e-18 95.1 98 70.4
BolC5t33806H Brassica oleracea HOM05D007722 ORTHO05D009730 8.4e-18 94.0 96 65.6
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 2.4e-17 92.4 95 67.4
C01p48660 Brassica napus HOM05D000771 ORTHO05D001963 2.4e-17 92.4 95 66.3
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 4.2e-17 91.7 95 65.3
BolC1t04820H Brassica oleracea HOM05D000771 ORTHO05D001963 4.2e-17 91.7 95 65.3
Aa31LG8G2980 Aethionema arabicum HOM05D007722 ORTHO05D009730 7.9e-16 87.4 132 53.8
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 3.0e-15 85.5 95 55.8
BraA05t22184Z Brassica rapa HOM05D000771 ORTHO05D001963 2.5e-14 82.4 96 62.5
BcaC05g28932 Brassica carinata HOM05D000020 ORTHO05D000543 2.8e-13 79.0 118 50.0
C05p50590 Brassica napus HOM05D000020 ORTHO05D000543 2.8e-13 79.0 118 50.0
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 8.1e-13 77.4 128 50.0
AL1G60800 Arabidopsis lyrata HOM05D007722 ORTHO05D009730 8.4e-10 67.4 132 47.0
AT1G52550 Arabidopsis thaliana HOM05D007722 ORTHO05D009730 2.1e-08 62.8 108 53.7
CARHR042660 Cardamine hirsuta HOM05D007722 ORTHO05D009730 7.9e-08 60.8 131 45.8
Thhalv10011859m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 6.7e-07 57.8 103 46.6
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 1.9e-06 56.2 108 49.1
Carub.0001s4151 Capsella rubella HOM05D007722 ORTHO05D009730 4.3e-06 55.1 132 41.7


User provided reference genes

Program Settings