Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 0.0e+00 1166.4 605 100.0
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 0.0e+00 1125.2 612 94.3
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 0.0e+00 1113.6 607 94.2
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 5.4e-302 1040.4 614 88.3
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 2.2e-300 1035.0 622 87.5
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 2.3e-297 1025.0 608 88.2
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 4.1e-294 1014.2 612 86.3
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 7.7e-293 1010.0 618 86.4
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 7.2e-291 1003.4 612 85.5
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 7.2e-291 1003.4 612 85.5
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 1.1e-286 989.6 615 86.5
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 4.7e-274 947.6 611 81.5
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 6.0e-261 904.0 625 77.3
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 1.6e-250 869.4 633 71.7
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 1.5e-203 713.4 607 62.6
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 3.0e-196 689.1 608 60.5
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 2.6e-195 686.0 611 62.7
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 7.5e-195 684.5 607 62.9
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 9.7e-195 684.1 604 61.9
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 1.7e-194 683.3 609 62.6
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 2.2e-194 682.9 607 62.9
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.4e-193 680.2 609 62.4
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 2.4e-193 679.5 641 57.9
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 4.1e-193 678.7 606 61.6
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 3.8e-191 672.2 624 58.0
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 1.5e-190 670.2 563 63.1
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 2.5e-190 669.5 616 59.9
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 2.5e-190 669.5 618 57.1
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 3.2e-190 669.1 607 58.2
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 4.2e-190 668.7 561 62.4
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 5.5e-190 668.3 616 57.1
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 2.7e-189 666.0 612 60.6
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 4.7e-189 665.2 565 62.7
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 6.1e-189 664.8 616 56.8
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 1.4e-188 663.7 613 59.1
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 2.3e-188 662.9 610 56.7
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 6.8e-188 661.4 558 62.9
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 8.8e-188 661.0 630 58.4
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 1.3e-186 657.1 546 65.0
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 2.8e-186 656.0 622 55.5
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 6.3e-186 654.8 542 61.4
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 4.1e-185 652.1 560 62.1
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 5.4e-185 651.7 614 58.3
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 7.0e-185 651.4 569 59.6
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 9.1e-185 651.0 571 60.8
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 1.6e-184 650.2 609 60.6
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 2.7e-184 649.4 623 59.1
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 2.7e-184 649.4 643 54.9
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 7.7e-184 647.9 610 60.2
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 5.0e-183 645.2 618 56.8
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 1.1e-182 644.0 605 56.7
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 1.2e-181 640.6 616 55.0
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 1.6e-181 640.2 618 57.8
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 2.1e-181 639.8 617 57.5
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 2.8e-181 639.4 613 55.8
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 2.8e-181 639.4 572 58.9
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 2.8e-181 639.4 618 57.8
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 4.7e-181 638.6 605 58.8
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 8.0e-181 637.9 615 60.7
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 1.8e-180 636.7 610 58.0
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 4.0e-180 635.6 618 57.3
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 8.8e-180 634.4 521 65.1
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 1.2e-179 634.0 618 56.1
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 1.5e-179 633.6 642 56.2
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 3.4e-179 632.5 619 56.9
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 9.8e-179 630.9 597 57.0
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 9.8e-179 630.9 556 58.5
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 8.3e-178 627.9 624 56.7
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 1.8e-177 626.7 617 55.6
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 3.5e-176 622.5 557 60.7
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 3.5e-176 622.5 563 60.6
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 4.5e-176 622.1 635 56.9
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 1.7e-175 620.2 625 54.6
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 2.9e-175 619.4 610 55.9
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 3.3e-174 615.9 605 56.5
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 5.6e-174 615.1 548 62.2
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 5.6e-174 615.1 615 55.6
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 7.3e-174 614.8 631 55.3
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 7.3e-174 614.8 622 57.6
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 8.0e-173 611.3 582 58.8
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 3.0e-172 609.4 619 52.8
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.0e-171 606.7 571 59.7
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 3.7e-170 602.4 589 54.3
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 1.6e-168 597.0 555 58.0
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 5.9e-168 595.1 611 53.5
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 9.5e-166 587.8 547 59.0
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 6.8e-164 581.6 631 51.0
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 6.8e-156 555.1 479 59.5
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 1.7e-154 550.4 582 50.2
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 1.9e-153 547.0 622 49.4
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 5.1e-151 538.9 630 50.0
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 9.9e-147 524.6 547 51.6
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 2.3e-143 513.5 499 57.5
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 1.1e-140 504.6 559 51.7
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 2.4e-140 503.4 535 49.9
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 4.4e-139 499.2 381 64.3
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 6.0e-136 488.8 641 46.6
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 2.4e-132 476.9 546 48.4
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 2.2e-130 470.3 339 64.0
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.3e-111 407.9 418 56.5
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 2.9e-98 363.6 341 58.4
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 5.1e-95 352.8 350 58.9
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 2.3e-79 300.8 532 35.9
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 1.5e-46 191.8 462 34.0
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 1.0e-42 179.1 448 35.9
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 5.0e-42 176.8 269 36.4
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 1.1e-41 175.6 271 36.5
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 2.0e-38 164.9 241 34.9
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.6e-32 145.2 130 54.6
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 2.1e-27 128.3 91 65.9
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 1.6e-24 118.6 76 72.4
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 3.6e-24 117.5 89 65.2
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 2.4e-23 114.8 83 66.3
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 1.1e-20 105.9 68 63.2
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 7.1e-20 103.2 69 69.6
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 3.5e-19 100.9 233 27.5
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 9.6e-17 92.8 106 53.8


User provided reference genes

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