Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G26160 Arabidopsis lyrata HOM05D009071 ORTHO05D011247 3.5e-49 198.7 173 100.0
Sp3g12210 Schrenkiella parvula HOM05D009071 ORTHO05D011247 1.3e-22 110.5 200 68.0
Carub.0003s1354 Capsella rubella HOM05D009071 ORTHO05D011247 5.0e-19 98.6 52 96.2
A03p38590 Brassica napus HOM05D009071 ORTHO05D011247 2.5e-18 96.3 72 87.5
CARHR088780 Cardamine hirsuta HOM05D009071 ORTHO05D011247 3.2e-18 95.9 51 96.1
BraA03t13006Z Brassica rapa HOM05D009071 ORTHO05D011247 4.2e-18 95.5 51 94.1
BcaC01g03961 Brassica carinata HOM05D009071 ORTHO05D011247 8.0e-17 91.3 76 78.9
BolC3t16935H Brassica oleracea HOM05D009071 ORTHO05D011247 8.0e-17 91.3 76 78.9
C03p46700 Brassica napus HOM05D009071 ORTHO05D011247 1.0e-16 90.9 48 93.8
Aa31LG8G1160 Aethionema arabicum HOM05D009071 ORTHO05D011247 1.2e-15 87.4 48 87.5
BraA05t22355Z Brassica rapa HOM05D009071 ORTHO05D011247 5.7e-15 85.1 72 79.2
A05p35450 Brassica napus HOM05D009071 ORTHO05D011247 1.3e-14 84.0 52 86.5
BolC5t34044H Brassica oleracea HOM05D009071 ORTHO05D011247 1.7e-14 83.6 52 86.5
BcaC05g29137 Brassica carinata HOM05D009071 ORTHO05D011247 2.8e-14 82.8 52 86.5
C05p53760 Brassica napus HOM05D009071 ORTHO05D011247 2.8e-14 82.8 52 86.5
BcaB04g18815 Brassica carinata HOM05D009071 ORTHO05D011247 6.3e-14 81.6 47 91.5
BcaB06g25415 Brassica carinata HOM05D009071 ORTHO05D011247 1.1e-13 80.9 72 80.6
THA.LOC104810363 Tarenaya hassleriana HOM05D009071 ORTHO05D011247 1.5e-10 70.5 48 70.8
Thhalv10012303m.g Eutrema salsugineum HOM05D009071 ORTHO05D011247 6.1e-09 65.1 48 68.8
BcaB04g17014 Brassica carinata HOM05D009071 ORTHO05D011247 2.0e-07 60.1 46 63.0
ClCG07G014060 Citrullus lanatus HOM05D008345 ORTHO05D010179 2.0e-07 60.1 46 65.2
MELO3C025805.2 Cucumis melo HOM05D008345 ORTHO05D010179 2.0e-07 60.1 46 65.2
CsaV3_3G031340 Cucumis sativus L. HOM05D008345 ORTHO05D010179 2.6e-07 59.7 46 65.2
Carub.0001s4345 Capsella rubella HOM05D009071 ORTHO05D011247 3.4e-07 59.3 46 63.0
AT1G54215 Arabidopsis thaliana HOM05D009071 ORTHO05D011247 5.7e-07 58.5 46 63.0
BcaC01g01447 Brassica carinata HOM05D009071 ORTHO05D011247 7.5e-07 58.2 45 62.2
BcaC01g01448 Brassica carinata HOM05D009071 ORTHO05D011247 7.5e-07 58.2 45 62.2
A08p01090 Brassica napus HOM05D009071 ORTHO05D011247 7.5e-07 58.2 45 62.2
C03p92110 Brassica napus HOM05D009071 ORTHO05D011247 7.5e-07 58.2 45 62.2
BraA08t32165Z Brassica rapa HOM05D009071 ORTHO05D011247 7.5e-07 58.2 45 62.2
BcaC01g01446 Brassica carinata HOM05D009071 ORTHO05D011247 9.8e-07 57.8 43 65.1
Cfa003533 Carpinus fangiana HOM05D008345 ORTHO05D010179 2.2e-06 56.6 44 65.9
AL1G62930 Arabidopsis lyrata HOM05D009071 ORTHO05D011247 3.7e-06 55.8 43 65.1
A06p00440 Brassica napus HOM05D009071 ORTHO05D011247 4.9e-06 55.5 46 56.5
BraA06t23258Z Brassica rapa HOM05D009071 ORTHO05D011247 4.9e-06 55.5 46 56.5


User provided reference genes

Program Settings