Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G25520 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 3.4e-58 228.0 109 100.0
AT3G13590 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 9.8e-21 103.6 66 83.3
CARHR088270 Cardamine hirsuta HOM05D000125 ORTHO05D000120 2.0e-18 95.9 65 70.8
CARHR088280 Cardamine hirsuta HOM05D000125 ORTHO05D000120 3.5e-18 95.1 67 70.1
Carub.0007s3012 Capsella rubella HOM05D000125 ORTHO05D000120 2.3e-17 92.4 66 72.7
CARHR088290 Cardamine hirsuta HOM05D000125 ORTHO05D000120 2.5e-16 89.0 66 69.7
Thhalv10019837m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 2.0e-13 79.3 74 50.0
AL3G25500 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 1.3e-12 76.6 91 49.5
Thhalv10018463m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 4.9e-12 74.7 72 52.8
BraA05t22389Z Brassica rapa HOM05D000125 ORTHO05D000120 1.1e-11 73.6 73 49.3
BcaC01g02937 Brassica carinata HOM05D000125 ORTHO05D000120 2.4e-11 72.4 61 57.4
A05p35860 Brassica napus HOM05D000125 ORTHO05D000120 1.2e-10 70.1 65 50.8
BraA05t22392Z Brassica rapa HOM05D000125 ORTHO05D000120 1.2e-10 70.1 65 50.8
BcaC05g29171 Brassica carinata HOM05D000125 ORTHO05D000120 2.0e-10 69.3 65 49.2
C05p54290 Brassica napus HOM05D000125 ORTHO05D000120 2.0e-10 69.3 65 49.2
BolC5t34096H Brassica oleracea HOM05D000125 ORTHO05D000120 2.0e-10 69.3 65 49.2
BcaB06g25452 Brassica carinata HOM05D000125 ORTHO05D000120 1.5e-08 63.2 67 49.3
A05p35830 Brassica napus HOM05D000125 ORTHO05D000120 1.9e-08 62.8 68 47.1
BcaB06g25453 Brassica carinata HOM05D000125 ORTHO05D000120 4.3e-08 61.6 67 52.2
A05p35820 Brassica napus HOM05D000125 ORTHO05D000120 4.3e-08 61.6 66 48.5
BraA05t22387Z Brassica rapa HOM05D000125 ORTHO05D000120 4.3e-08 61.6 66 48.5
Carub.0001s3077 Capsella rubella HOM05D000125 ORTHO05D000120 1.8e-06 56.2 71 43.7
AT3G11402 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 3.1e-06 55.5 72 41.7
C03p44750 Brassica napus HOM05D000125 ORTHO05D000120 5.2e-06 54.7 57 52.6
BolC3t16738H Brassica oleracea HOM05D000125 ORTHO05D000120 5.2e-06 54.7 57 52.6
CARHR209970 Cardamine hirsuta HOM05D000125 ORTHO05D000120 8.9e-06 53.9 71 39.4


User provided reference genes

Program Settings