Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G24640 Arabidopsis lyrata HOM05D007991 ORTHO05D010158 1.1e-26 122.5 61 100.0
AT3G12960 Arabidopsis thaliana HOM05D007991 ORTHO05D010158 2.4e-24 114.8 61 95.1
Carub.0003s1230 Capsella rubella HOM05D007991 ORTHO05D010158 2.4e-24 114.8 60 95.0
Thhalv10022193m.g Eutrema salsugineum HOM05D007991 ORTHO05D010158 9.0e-24 112.8 61 93.4
BcaC09g48284 Brassica carinata HOM05D007991 ORTHO05D010158 6.5e-22 106.7 61 88.5
C01p52180 Brassica napus HOM05D007991 ORTHO05D010158 6.5e-22 106.7 61 88.5
BolC1t05158H Brassica oleracea HOM05D007991 ORTHO05D010158 6.5e-22 106.7 61 88.5
BraA01t04089Z Brassica rapa HOM05D007991 ORTHO05D010158 6.5e-22 106.7 61 88.5
BcaB04g21024 Brassica carinata HOM05D007991 ORTHO05D010158 3.2e-21 104.4 60 86.7
Sp3g11110 Schrenkiella parvula HOM05D007991 ORTHO05D010158 1.2e-20 102.4 61 86.9
CARHR087490 Cardamine hirsuta HOM05D007991 ORTHO05D010158 1.0e-19 99.4 61 82.0
Medtr2g069650 Medicago truncatula HOM05D007991 ORTHO05D010158 3.3e-18 94.4 55 83.6
Aa31LG8G190 Aethionema arabicum HOM05D007991 ORTHO05D010158 4.3e-18 94.0 60 71.7
GSVIVG01012568001 Vitis vinifera HOM05D007991 ORTHO05D010158 3.7e-17 90.9 53 84.9
GSVIVG01035227001 Vitis vinifera HOM05D007991 ORTHO05D010158 3.7e-17 90.9 53 84.9
MD05G1219200 Malus domestica HOM05D007991 ORTHO05D010158 4.8e-17 90.5 57 73.7
Prupe.4G140900 Prunus persica HOM05D007991 ORTHO05D010158 4.8e-17 90.5 57 73.7
Ciclev10023629m.g Citrus clementina HOM05D007991 ORTHO05D010158 6.3e-17 90.1 61 73.8
Nn7g37867 Nelumbo nucifera HOM05D007991 ORTHO05D010158 1.1e-16 89.4 53 81.1
TPR.G9765 Trifolium pratense HOM05D007991 ORTHO05D010158 1.1e-16 89.4 55 78.2
Cpa.g.sc10.36 Carica papaya HOM05D007991 ORTHO05D010158 1.4e-16 89.0 55 78.2
PGR042G3415 Punica granatum HOM05D007991 ORTHO05D010158 1.8e-16 88.6 55 76.4
Manes.06G170901 Manihot esculenta HOM05D007991 ORTHO05D010158 2.4e-16 88.2 53 81.1
Ah.07g206310 Amaranthus hybridus HOM05D007991 ORTHO05D010158 3.1e-16 87.8 57 73.7
Gohir.A11G002600 Gossypium hirsutum HOM05D007991 ORTHO05D010158 3.1e-16 87.8 54 75.9
Aqoxy6G00820 Aquilegia oxysepala HOM05D007991 ORTHO05D010158 4.1e-16 87.4 64 67.2
Lsat_1_v5_gn_7_112301 Lactuca sativa HOM05D007991 ORTHO05D010158 4.1e-16 87.4 53 79.2
Atru.chr8.1056 Acer truncatum HOM05D007991 ORTHO05D010158 5.3e-16 87.0 53 77.4
Manes.06G170500 Manihot esculenta HOM05D007991 ORTHO05D010158 6.9e-16 86.7 53 79.2
TWI39G0184 Tripterygium wilfordii HOM05D007991 ORTHO05D010158 6.9e-16 86.7 61 67.2
Lalb_Chr19g0133391 Lupinus albus HOM05D007991 ORTHO05D010158 9.0e-16 86.3 55 72.7
COL.COLO4_04148 Corchorus olitorius HOM05D007991 ORTHO05D010158 1.5e-15 85.5 53 75.5
COL.COLO4_28875 Corchorus olitorius HOM05D007991 ORTHO05D010158 1.5e-15 85.5 53 75.5
Gorai.007G003200 Gossypium raimondii HOM05D007991 ORTHO05D010158 1.5e-15 85.5 54 74.1
Lj3g0014492 Lotus japonicus HOM05D007991 ORTHO05D010158 1.5e-15 85.5 55 72.7
Psat1g011440 Pisum sativum HOM05D007991 ORTHO05D010158 2.0e-15 85.1 55 72.7
RcHm_v2.0_Chr5g0026701 Rosa chinensis HOM05D007991 ORTHO05D010158 2.0e-15 85.1 58 69.0
Cfa019429 Carpinus fangiana HOM05D007991 ORTHO05D010158 2.6e-15 84.7 50 78.0
ECA236G0423 Erigeron canadensis HOM05D007991 ORTHO05D010158 2.6e-15 84.7 55 74.5
CANSAT80G1088 Cannabis sativa HOM05D007991 ORTHO05D010158 3.4e-15 84.3 49 77.6
Peaxi162Scf00452g00812 Petunia axillaris HOM05D007991 ORTHO05D010158 3.4e-15 84.3 55 72.7
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 4.5e-15 84.0 55 72.7
Gohir.D11G002200 Gossypium hirsutum HOM05D007991 ORTHO05D010158 4.5e-15 84.0 54 72.2
Glyma.08G172800 Glycine max HOM05D007991 ORTHO05D010158 5.9e-15 83.6 55 69.1
Lalb_Chr03g0031611 Lupinus albus HOM05D007991 ORTHO05D010158 7.7e-15 83.2 53 71.7
QL04p074011 Quercus lobata HOM05D007991 ORTHO05D010158 7.7e-15 83.2 59 69.5
CiPaw.04G012700 Carya illinoinensis HOM05D007991 ORTHO05D010158 1.0e-14 82.8 55 69.1
Ca_03685_v3 Cicer arietinum L. HOM05D007991 ORTHO05D010158 1.0e-14 82.8 56 75.0
HanXRQChr11g0334671 Helianthus annuus HOM05D007991 ORTHO05D010158 1.7e-14 82.0 53 75.5
Solyc07g066400.1 Solanum lycopersicum HOM05D007991 ORTHO05D010158 1.7e-14 82.0 54 70.4
FAN16G1552 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.2e-14 81.6 58 69.0
PGSC0003DMG400022239 Solanum tuberosum HOM05D007991 ORTHO05D010158 2.9e-14 81.3 54 70.4
ClCG11G016360 Citrullus lanatus HOM05D007991 ORTHO05D010158 3.8e-14 80.9 55 69.1
ClCG11G016370 Citrullus lanatus HOM05D007991 ORTHO05D010158 3.8e-14 80.9 55 69.1
MELO3C010561.2 Cucumis melo HOM05D007991 ORTHO05D010158 3.8e-14 80.9 53 71.7
FAN25G2658 Fragaria x ananassa HOM05D007991 ORTHO05D010158 3.8e-14 80.9 58 69.0
EL10Ac4g08566 Beta vulgaris HOM05D007991 ORTHO05D010158 5.0e-14 80.5 61 62.3
CAN.G943.33 Capsicum annuum HOM05D007991 ORTHO05D010158 5.0e-14 80.5 54 68.5
MBI02_g12653_MAGBIO Magnolia biondii HOM05D007991 ORTHO05D010158 5.0e-14 80.5 55 70.9
Sopen07g034570 Solanum pennellii HOM05D007991 ORTHO05D010158 8.5e-14 79.7 54 70.4
FAN11G2864 Fragaria x ananassa HOM05D007991 ORTHO05D010158 1.1e-13 79.3 58 67.2
FAN21G1902 Fragaria x ananassa HOM05D007991 ORTHO05D010158 1.1e-13 79.3 58 67.2
Phvul.005G056100 Phaseolus vulgaris HOM05D007991 ORTHO05D010158 1.1e-13 79.3 61 59.0
Sc16g0005380 Simmondsia chinensis HOM05D007991 ORTHO05D010158 1.4e-13 79.0 56 66.1
Duzib205G1447 Durio zibethinus HOM05D007991 ORTHO05D010158 1.6e-12 75.5 51 66.7
MD05G1300500 Malus domestica HOM05D007991 ORTHO05D010158 3.6e-12 74.3 48 75.0
Nn4g23994 Nelumbo nucifera HOM05D007991 ORTHO05D010158 4.6e-12 73.9 53 69.8
unitig_8.g4768 Utricularia gibba HOM05D007991 ORTHO05D010158 1.4e-11 72.4 53 69.8
Nitab4.5_0008437g0010 Nicotiana tabacum HOM05D007991 ORTHO05D010158 1.8e-11 72.0 58 62.1
SalBow2G0434 Salvia bowleyana HOM05D007991 ORTHO05D010158 2.3e-11 71.6 52 67.3
PSO675G0275 Papaver somniferum HOM05D007991 ORTHO05D010158 3.0e-11 71.2 61 59.0
Sed0025657 Sechium edule HOM05D007991 ORTHO05D010158 5.1e-11 70.5 53 66.0
CSS0001388 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 1.5e-10 68.9 53 64.2
CSS0033446 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 9.7e-10 66.2 57 57.9
Os08g0104400 Oryza sativa ssp. japonica HOM05D007991 ORTHO05D010158 1.2e-07 59.3 54 48.1
Zm00001eb260130 Zea mays HOM05D007991 ORTHO05D010158 1.7e-06 55.5 54 50.0


User provided reference genes

Program Settings