Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 2.0e-71 272.3 134 100.0
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 7.4e-71 270.4 134 99.3
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 6.3e-70 267.3 134 96.3
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 1.4e-69 266.2 134 96.3
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 1.4e-69 266.2 134 96.3
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 1.4e-69 266.2 134 96.3
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 1.4e-69 266.2 134 96.3
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 1.8e-69 265.8 134 96.3
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 3.1e-69 265.0 134 95.5
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 4.1e-69 264.6 134 95.5
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 4.1e-69 264.6 134 95.5
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 3.8e-67 258.1 144 89.6
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 6.5e-67 257.3 143 88.8
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 6.5e-67 257.3 143 89.5
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 8.5e-67 256.9 147 87.8
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 1.1e-66 256.5 134 93.3
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 1.9e-66 255.8 143 88.1
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 3.2e-66 255.0 141 88.7
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 3.2e-66 255.0 141 88.7
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 9.4e-58 226.9 135 82.2
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 4.8e-54 214.5 135 80.0
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 1.0e-51 206.8 131 76.3
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 3.2e-50 201.8 129 73.6
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 9.4e-50 200.3 131 73.3
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 9.4e-50 200.3 131 73.3
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 1.2e-49 199.9 131 73.3
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 1.6e-49 199.5 131 73.3
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 2.7e-49 198.7 129 75.2
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 2.7e-49 198.7 131 73.3
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 2.7e-49 198.7 131 73.3
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 3.6e-49 198.4 131 74.0
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 4.7e-49 198.0 131 72.5
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 8.0e-49 197.2 131 73.3
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 8.0e-49 197.2 131 71.8
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 8.0e-49 197.2 131 71.8
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.0e-48 196.8 131 72.5
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 1.4e-48 196.4 134 72.4
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.4e-48 196.4 131 71.8
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 1.8e-48 196.1 130 72.3
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 1.8e-48 196.1 131 74.0
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 2.3e-48 195.7 131 72.5
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 3.0e-48 195.3 131 71.8
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 3.0e-48 195.3 131 71.8
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 3.0e-48 195.3 131 73.3
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 4.0e-48 194.9 131 72.5
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 6.8e-48 194.1 131 72.5
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 6.8e-48 194.1 131 70.2
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 8.8e-48 193.7 131 70.2
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 1.2e-47 193.4 125 74.4
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 2.0e-47 192.6 131 71.8
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 3.4e-47 191.8 129 69.0
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 4.4e-47 191.4 131 69.5
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 5.7e-47 191.0 131 69.5
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 9.8e-47 190.3 123 74.0
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 9.8e-47 190.3 131 69.5
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 1.3e-46 189.9 131 68.7
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 1.7e-46 189.5 139 68.3
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 1.7e-46 189.5 125 72.0
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 1.7e-46 189.5 127 71.7
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 1.7e-46 189.5 131 69.5
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 1.7e-46 189.5 130 68.5
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 1.7e-46 189.5 131 67.9
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 2.2e-46 189.1 129 67.4
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 3.7e-46 188.3 129 69.8
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 6.3e-46 187.6 128 70.3
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.4e-45 186.4 124 71.8
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.4e-45 186.4 124 71.8
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 1.8e-45 186.0 131 68.7
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 2.4e-45 185.7 129 66.7
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 2.4e-45 185.7 129 69.8
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 4.1e-45 184.9 128 65.6
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 5.4e-45 184.5 131 66.4
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 5.4e-45 184.5 127 66.9
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 5.4e-45 184.5 133 64.7
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 7.0e-45 184.1 134 64.9
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 9.1e-45 183.7 127 69.3
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 1.6e-44 183.0 130 66.9
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 2.0e-44 182.6 130 66.9
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 2.7e-44 182.2 131 67.9
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 3.5e-44 181.8 122 70.5
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 3.5e-44 181.8 124 71.0
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 4.5e-44 181.4 127 66.1
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 7.7e-44 180.6 128 65.6
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 1.0e-43 180.3 128 67.2
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 1.0e-43 180.3 128 65.6
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 1.0e-43 180.3 136 66.9
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 1.0e-43 180.3 131 64.1
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 5.0e-43 177.9 134 63.4
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 6.6e-43 177.6 124 68.5
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 6.6e-43 177.6 126 68.3
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 1.5e-42 176.4 127 64.6
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 1.5e-42 176.4 127 64.6
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 5.6e-42 174.5 127 68.5
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 5.6e-42 174.5 127 64.6
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 9.5e-42 173.7 127 64.6
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 2.1e-41 172.6 128 64.8
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 3.6e-41 171.8 128 61.7
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 4.7e-41 171.4 128 63.3
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 4.7e-41 171.4 154 55.2
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 4.7e-41 171.4 129 61.2
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 1.0e-40 170.2 130 61.5
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 1.4e-40 169.9 131 62.6
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 1.8e-40 169.5 129 63.6
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 1.8e-40 169.5 129 62.8
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 2.3e-40 169.1 129 64.3
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 6.8e-40 167.5 128 61.7
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 1.2e-39 166.8 135 59.3
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 3.7e-38 161.8 130 61.5
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 3.7e-38 161.8 169 50.3
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 9.2e-37 157.1 129 61.2
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.0e-35 153.7 127 62.2
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 2.9e-35 152.1 98 72.4
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 2.5e-34 149.1 74 97.3
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 3.1e-32 142.1 127 58.3
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 2.6e-31 139.0 130 53.1
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 1.7e-30 136.3 126 55.6
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 2.4e-29 132.5 129 51.9
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 3.2e-29 132.1 129 51.2
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 7.0e-29 131.0 95 65.3
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.0e-27 127.1 93 62.4
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 8.6e-27 124.0 125 47.2
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 1.5e-23 113.2 69 76.8
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 5.8e-23 111.3 70 74.3
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 2.9e-22 109.0 70 71.4
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 1.1e-21 107.1 74 67.6
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 1.1e-21 107.1 69 72.5
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.4e-21 105.9 70 70.0
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 2.7e-20 102.4 72 65.3
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 4.6e-20 101.7 69 69.6
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 4.6e-20 101.7 118 41.5
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 6.0e-20 101.3 71 66.2
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 8.6e-19 97.4 62 77.4
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 8.6e-19 97.4 62 77.4
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 3.3e-18 95.5 83 59.0
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 3.3e-18 95.5 68 61.8
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 5.6e-18 94.7 72 58.3
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 3.6e-17 92.0 62 71.0
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 4.7e-17 91.7 62 71.0
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 9.9e-15 84.0 66 62.1
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 1.1e-13 80.5 53 66.0
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 2.7e-12 75.9 50 70.0
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 3.5e-12 75.5 75 49.3
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 4.6e-12 75.1 118 35.6
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.0e-11 73.9 76 47.4
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 3.6e-09 65.5 104 30.8
BcaC04g23227 Brassica carinata HOM05D004238 ORTHO05D004934 2.0e-07 59.7 28 96.4
C08p35620 Brassica napus HOM05D004238 ORTHO05D004934 2.0e-07 59.7 28 96.4
BolC9t53984H Brassica oleracea HOM05D004238 ORTHO05D004934 2.0e-07 59.7 28 96.4
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 3.4e-07 58.9 49 53.1
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 7.6e-07 57.8 76 35.5
BcaC08g45100 Brassica carinata HOM05D004238 ORTHO05D004934 9.9e-07 57.4 28 89.3
BolC6t37880H Brassica oleracea HOM05D004238 ORTHO05D004934 9.9e-07 57.4 28 89.3
PGSC0003DMG400003395 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.7e-06 56.6 48 50.0
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 8.4e-06 54.3 76 32.9


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