Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 1.1e-204 716.5 361 100.0
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 2.2e-178 629.0 362 88.4
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 3.1e-164 582.0 353 83.0
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 6.5e-162 574.3 368 79.6
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 2.5e-161 572.4 353 83.6
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 1.7e-157 559.7 313 89.1
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 6.9e-156 554.3 288 96.2
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 1.5e-155 553.1 312 87.5
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 4.5e-155 551.6 311 88.4
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 1.1e-153 547.0 339 81.7
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 6.7e-151 537.7 313 85.3
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 2.8e-149 532.3 304 86.8
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 4.8e-149 531.6 313 84.3
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 1.4e-148 530.0 317 82.6
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 2.4e-148 529.3 310 83.9
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 7.2e-145 517.7 317 81.1
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 2.3e-143 512.7 288 87.5
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 1.0e-135 487.3 285 84.6
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 2.4e-116 422.9 309 66.7
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 4.6e-115 418.7 310 62.9
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 7.8e-115 417.9 303 65.7
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 1.3e-114 417.2 354 58.8
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 3.0e-114 416.0 316 63.0
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 1.1e-113 414.1 290 65.9
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 2.5e-113 412.9 322 62.7
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 4.3e-113 412.1 321 62.3
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 1.6e-112 410.2 341 58.7
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 1.6e-112 410.2 303 63.4
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 2.1e-112 409.8 310 62.3
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 1.0e-111 407.5 298 63.8
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 4.0e-111 405.6 318 59.7
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 3.4e-110 402.5 297 63.3
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 4.4e-110 402.1 307 62.9
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 2.2e-109 399.8 304 60.9
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 3.7e-109 399.1 329 61.1
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 3.7e-109 399.1 323 59.4
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 6.4e-109 398.3 296 63.2
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 8.3e-109 397.9 303 62.7
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 1.1e-108 397.5 290 62.4
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 1.9e-108 396.7 295 63.4
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 2.4e-108 396.4 322 61.5
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 9.2e-108 394.4 316 58.2
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 3.9e-106 389.0 316 59.2
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 4.3e-105 385.6 306 59.2
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 9.5e-105 384.4 299 60.9
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 1.6e-104 383.6 336 56.2
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 1.1e-103 380.9 301 57.1
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.8e-103 380.2 298 60.7
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 2.3e-103 379.8 280 66.8
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 8.9e-103 377.9 301 56.8
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 2.0e-102 376.7 333 55.9
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 2.6e-102 376.3 304 60.2
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 3.4e-102 375.9 298 60.1
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 5.8e-102 375.2 311 56.6
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 2.9e-101 372.9 298 59.7
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 1.4e-100 370.5 351 52.4
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 1.9e-100 370.2 311 55.9
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 2.1e-99 366.7 316 55.7
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 8.6e-98 361.3 299 54.2
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 1.1e-97 360.9 331 53.8
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 1.4e-95 354.0 332 54.5
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 7.6e-94 348.2 270 61.1
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 1.7e-93 347.1 296 54.7
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 2.9e-93 346.3 287 55.4
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 1.1e-92 344.4 296 55.1
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 1.4e-92 344.0 309 53.7
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 1.4e-92 344.0 304 54.3
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 2.1e-91 340.1 464 41.8
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 4.6e-91 339.0 278 55.4
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.3e-90 337.4 390 46.4
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 3.0e-90 336.3 270 57.8
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 1.1e-89 334.3 237 65.8
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 5.2e-87 325.5 325 49.2
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 3.4e-86 322.8 306 51.0
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 5.8e-86 322.0 256 59.4
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 1.3e-85 320.9 342 50.6
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 6.4e-85 318.5 250 59.6
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 1.4e-84 317.4 237 62.9
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 9.3e-84 314.7 308 51.0
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 2.7e-83 313.2 350 49.7
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 3.0e-82 309.7 295 50.2
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 5.1e-82 308.9 263 57.8
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 1.1e-81 307.8 309 49.8
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 1.3e-80 304.3 279 51.6
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 2.6e-78 296.6 236 58.9
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 1.0e-74 284.6 231 63.2
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 4.3e-73 279.3 236 55.1
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 3.2e-68 263.1 284 45.1
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 2.7e-67 260.0 317 45.4
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 3.5e-67 259.6 210 58.1
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 4.6e-67 259.2 203 60.1
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.1e-65 254.6 200 61.0
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 8.1e-64 248.4 309 41.7
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 7.9e-59 231.9 129 86.0
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 5.9e-54 215.7 171 61.4
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 1.0e-50 204.9 192 53.6
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 2.3e-50 203.8 145 65.5
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 7.4e-49 198.7 283 42.0
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 6.9e-47 192.2 192 51.0
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 2.6e-46 190.3 311 36.3
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 7.7e-46 188.7 141 62.4
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 7.2e-44 182.2 307 35.2
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 1.4e-42 177.9 147 55.1
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.1e-41 174.9 104 70.2
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.4e-39 167.9 135 56.3
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 2.4e-39 167.2 182 42.9
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 2.4e-39 167.2 436 31.0
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 1.2e-38 164.9 86 87.2
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 1.8e-31 141.0 82 72.0
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 1.2e-30 138.3 98 60.2
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 2.5e-28 130.6 138 52.2
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 1.4e-26 124.8 74 73.0
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 3.0e-26 123.6 95 55.8
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 1.1e-23 115.2 284 28.2
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 7.0e-23 112.5 315 28.6
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 1.7e-21 107.8 330 27.9
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 1.7e-16 91.3 83 55.4
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 4.4e-09 66.6 44 65.9
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 3.7e-08 63.5 46 56.5
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 4.5e-06 56.6 44 61.4


User provided reference genes

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