Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 1.3e-293 1012.3 491 100.0
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 7.0e-276 953.4 491 93.9
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 1.5e-270 935.6 492 91.9
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 7.0e-268 926.8 489 90.6
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 8.0e-264 913.3 489 90.2
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 5.6e-257 890.6 492 88.0
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 1.6e-240 835.9 490 83.1
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 3.2e-236 821.6 490 82.2
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 7.8e-235 817.0 490 81.6
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 6.4e-221 770.8 494 76.1
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 1.3e-205 719.9 490 74.3
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 9.0e-191 670.6 474 66.9
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 3.8e-189 665.2 480 66.7
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 8.5e-189 664.1 489 66.1
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 2.1e-187 659.4 487 65.7
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 3.0e-186 655.6 488 64.5
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 3.0e-186 655.6 480 65.6
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 4.8e-184 648.3 484 63.2
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 1.4e-183 646.7 420 71.0
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.1e-183 645.2 496 63.7
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.9e-183 644.4 496 63.7
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.0e-182 642.9 496 63.7
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.0e-182 642.9 496 63.7
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.6e-182 642.5 496 63.7
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.6e-182 642.5 496 63.7
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.4e-182 642.1 495 63.2
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.4e-182 642.1 488 64.1
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.5e-182 641.7 496 63.3
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.3e-181 640.2 494 62.6
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.2e-181 639.4 494 62.8
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.8e-181 638.6 496 63.3
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.0e-181 638.3 494 62.6
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 4.2e-180 635.2 473 65.5
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 2.7e-179 632.5 477 63.5
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 7.9e-179 630.9 473 64.7
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 1.0e-178 630.6 473 64.1
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 3.9e-178 628.6 494 63.4
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 5.1e-178 628.2 471 64.5
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 6.7e-178 627.9 466 65.5
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 1.5e-177 626.7 481 64.4
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 2.0e-177 626.3 480 62.9
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 2.6e-177 625.9 482 62.4
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 3.3e-177 625.5 480 63.3
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 1.7e-176 623.2 494 62.3
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 8.2e-176 620.9 481 61.5
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 1.8e-175 619.8 475 62.7
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 1.8e-175 619.8 471 63.3
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 4.1e-175 618.6 400 70.8
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 1.3e-173 613.6 400 70.2
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 1.7e-173 613.2 401 70.3
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 2.9e-173 612.5 399 70.9
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 5.5e-172 608.2 477 63.1
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 2.7e-171 605.9 401 70.1
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 3.6e-171 605.5 485 61.9
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 1.0e-170 604.0 410 68.5
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 5.2e-170 601.7 492 60.0
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 1.1e-169 600.5 469 61.6
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 1.5e-169 600.1 398 69.8
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 2.0e-169 599.7 467 62.3
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 2.0e-169 599.7 401 68.8
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 2.6e-169 599.4 474 61.8
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 5.7e-169 598.2 398 69.8
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 1.7e-168 596.7 468 62.2
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 8.2e-168 594.3 387 71.6
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 8.2e-168 594.3 470 63.2
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.4e-167 593.6 397 69.0
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 1.8e-167 593.2 399 68.9
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 4.1e-167 592.0 399 69.4
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 2.6e-166 589.3 395 69.4
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 1.9e-164 583.2 485 57.9
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 2.5e-164 582.8 397 68.3
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 1.8e-162 576.6 402 67.7
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 3.0e-162 575.9 397 67.0
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 5.2e-162 575.1 357 74.2
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 7.5e-161 571.2 493 57.4
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 4.1e-159 565.5 373 70.2
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 1.5e-156 557.0 401 66.1
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 2.5e-156 556.2 409 63.1
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 1.2e-155 553.9 430 63.0
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 2.3e-154 549.7 396 65.2
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 8.8e-154 547.7 444 59.7
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 2.6e-153 546.2 365 68.2
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 8.3e-152 541.2 399 63.4
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 1.6e-150 537.0 369 66.9
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 1.6e-150 537.0 359 68.0
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 2.7e-150 536.2 401 64.3
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 3.3e-148 529.3 347 71.5
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 1.6e-147 526.9 473 57.1
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 1.0e-146 524.2 409 61.6
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 8.9e-146 521.2 348 69.8
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 1.5e-145 520.4 495 53.1
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 2.8e-131 473.0 398 57.3
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 1.6e-126 457.2 396 56.6
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 4.6e-118 429.1 350 60.3
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 8.6e-117 424.9 291 69.8
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 1.9e-108 397.1 324 60.8
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 8.4e-104 381.7 405 47.7
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 2.4e-90 337.0 294 55.8
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 4.6e-86 322.8 432 42.4
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 8.2e-83 312.0 433 39.7
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.1e-82 311.6 211 68.7
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 8.5e-72 275.4 449 38.3
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 6.5e-64 249.2 300 44.3
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 3.2e-63 246.9 158 70.9
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 8.8e-61 238.8 397 37.0
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 2.8e-43 180.6 118 64.4
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 2.7e-41 174.1 320 32.8
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 4.7e-30 136.7 296 31.1
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 4.0e-29 133.7 89 71.9
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 1.2e-22 112.1 59 89.8
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 2.8e-22 110.9 298 28.5
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 6.4e-19 99.8 72 65.3
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 2.3e-08 64.7 79 43.0
AagrBONN_evm.TU.Sc2ySwM_362.2473 Anthoceros agrestis HOM05D004627 ORTHO05D005745 8.1e-06 56.2 101 31.7


User provided reference genes

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