Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G21840 Arabidopsis lyrata HOM05D010420 ORTHO05D012780 6.6e-56 220.3 101 100.0
Carub.0003s0969 Capsella rubella HOM05D010420 ORTHO05D012780 1.8e-37 159.1 100 76.0
Carub.0007s3295 Capsella rubella HOM05D010420 ORTHO05D012780 3.1e-37 158.3 100 73.0
AL7G46660 Arabidopsis lyrata HOM05D010420 ORTHO05D012780 5.5e-34 147.5 101 71.3
Carub.0007s3296 Capsella rubella HOM05D010420 ORTHO05D012780 1.8e-29 132.5 98 62.2
CARHR120850 Cardamine hirsuta HOM05D010420 ORTHO05D012780 6.5e-27 124.0 99 63.6
C03p54120 Brassica napus HOM05D010420 ORTHO05D012780 2.5e-26 122.1 108 59.3
BraA03t13515Z Brassica rapa HOM05D010420 ORTHO05D012780 1.2e-25 119.8 108 58.3
A07p07650 Brassica napus HOM05D010420 ORTHO05D012780 7.9e-25 117.1 100 62.0
BraA07t28558Z Brassica rapa HOM05D010420 ORTHO05D012780 7.9e-25 117.1 102 61.8
BcaC06g35740 Brassica carinata HOM05D010420 ORTHO05D012780 1.0e-24 116.7 103 61.2
A03p43810 Brassica napus HOM05D010420 ORTHO05D012780 1.0e-24 116.7 108 57.4
C07p11450 Brassica napus HOM05D010420 ORTHO05D012780 1.0e-24 116.7 103 61.2
BolC7t41619H Brassica oleracea HOM05D010420 ORTHO05D012780 1.0e-24 116.7 103 61.2
CARHR120840 Cardamine hirsuta HOM05D010420 ORTHO05D012780 3.0e-24 115.2 88 63.6
BolC3t17703H Brassica oleracea HOM05D010420 ORTHO05D012780 3.9e-24 114.8 93 59.1
BcaC01g03271 Brassica carinata HOM05D010420 ORTHO05D012780 2.5e-23 112.1 91 59.3
BcaB05g22282 Brassica carinata HOM05D010420 ORTHO05D012780 2.8e-22 108.6 91 60.4
BcaB06g26673 Brassica carinata HOM05D010420 ORTHO05D012780 1.6e-17 92.8 85 52.9
BcaB03g14574 Brassica carinata HOM05D010420 ORTHO05D012780 2.0e-15 85.9 115 45.2
THA.LOC104816675 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 3.7e-14 81.6 93 43.0
THA.LOC104816439 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 2.4e-13 79.0 73 46.6
THA.LOC104816440 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 1.6e-12 76.3 82 42.7
CARHR084970 Cardamine hirsuta HOM05D003012 ORTHO05D002833 2.9e-11 72.0 71 50.7
THA.LOC104816678 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 2.9e-11 72.0 89 40.4
CARHR291870 Cardamine hirsuta HOM05D003012 ORTHO05D002833 1.9e-10 69.3 95 38.9
Aa31LG11G5250 Aethionema arabicum HOM05D013273 ORTHO05D002833 5.5e-10 67.8 91 40.7
THA.LOC104816681 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 5.5e-10 67.8 93 43.0
Thhalv10022372m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 3.6e-09 65.1 67 49.3
Aqoxy4G01112 Aquilegia oxysepala HOM05D000256 ORTHO05D000119 2.3e-08 62.4 81 38.3
Carub.0007s3746 Capsella rubella HOM05D003012 ORTHO05D002833 4.0e-08 61.6 98 40.8
A07p19700 Brassica napus HOM05D003012 ORTHO05D002833 5.2e-08 61.2 104 37.5
THA.LOC104816680 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 5.2e-08 61.2 91 36.3
Thhalv10015914m.g Eutrema salsugineum HOM05D003012 ORTHO05D000119 8.8e-08 60.5 60 41.7
BcaC08g44379 Brassica carinata HOM05D003012 ORTHO05D002833 2.0e-07 59.3 102 37.3
BcaNung05794 Brassica carinata HOM05D000149 ORTHO05D000076 2.0e-07 59.3 67 41.8
C06p18130 Brassica napus HOM05D003012 ORTHO05D002833 2.0e-07 59.3 102 37.3
BolC1t05395H Brassica oleracea HOM05D003012 ORTHO05D002833 2.0e-07 59.3 95 34.7
BolC6t37021H Brassica oleracea HOM05D003012 ORTHO05D002833 2.0e-07 59.3 102 37.3
BraA07t29670Z Brassica rapa HOM05D003012 ORTHO05D002833 2.0e-07 59.3 102 37.3
BcaB02g08008 Brassica carinata HOM05D003012 ORTHO05D002833 2.6e-07 58.9 93 38.7
THA.LOC104816435 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 3.3e-07 58.5 71 39.4
AT5G38440 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 4.4e-07 58.2 102 36.3
BcaB08g36803 Brassica carinata HOM05D003012 ORTHO05D002833 4.4e-07 58.2 101 36.6
BcaC02g08873 Brassica carinata HOM05D003012 ORTHO05D002833 4.4e-07 58.2 102 36.3
BcaC09g48089 Brassica carinata HOM05D003012 ORTHO05D002833 4.4e-07 58.2 94 35.1
A04p15380 Brassica napus HOM05D003012 ORTHO05D002833 4.4e-07 58.2 102 36.3
C04p49610 Brassica napus HOM05D003012 ORTHO05D002833 4.4e-07 58.2 102 36.3
BolC4t26548H Brassica oleracea HOM05D003012 ORTHO05D002833 4.4e-07 58.2 102 36.3
BraA04t17178Z Brassica rapa HOM05D003012 ORTHO05D002833 4.4e-07 58.2 102 36.3
THA.LOC104811406 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 4.4e-07 58.2 64 32.8
THA.LOC104815224 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 4.4e-07 58.2 64 32.8
BcaB06g27716 Brassica carinata HOM05D003012 ORTHO05D002833 5.7e-07 57.8 102 36.3
Thhalv10028054m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 5.7e-07 57.8 97 38.1
Carub.0007s3747 Capsella rubella HOM05D003012 ORTHO05D002833 7.5e-07 57.4 101 36.6
THA.LOC104813236 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 7.5e-07 57.4 95 31.6
Carub.0007s3750 Capsella rubella HOM05D003012 ORTHO05D002833 9.7e-07 57.0 102 33.3
THA.LOC104816438 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 9.7e-07 57.0 93 33.3
AL7G52140 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 1.3e-06 56.6 94 35.1
Carub.0003s0970 Capsella rubella HOM05D003012 ORTHO05D002833 1.7e-06 56.2 70 37.1
BcaC09g48088 Brassica carinata HOM05D003012 ORTHO05D002833 2.8e-06 55.5 67 38.8
C05p59030 Brassica napus HOM05D003012 ORTHO05D002833 3.7e-06 55.1 101 35.6
AT3G10460 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 4.8e-06 54.7 75 38.7
Carub.0007s1156 Capsella rubella HOM05D008344 ORTHO05D011034 4.8e-06 54.7 65 38.5
A01p41800 Brassica napus HOM05D003012 ORTHO05D002833 6.3e-06 54.3 96 33.3
C09p60090 Brassica napus HOM05D003012 ORTHO05D002833 6.3e-06 54.3 101 34.7
BolC9t58844H Brassica oleracea HOM05D003012 ORTHO05D002833 6.3e-06 54.3 101 34.7
BraA01t04252Z Brassica rapa HOM05D003012 ORTHO05D002833 6.3e-06 54.3 96 33.3
BolC1t01009H Brassica oleracea HOM05D008344 ORTHO05D011034 8.2e-06 53.9 90 36.7


User provided reference genes

Program Settings