Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 6.7e-165 583.9 297 100.0
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 2.6e-156 555.4 294 94.9
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 9.1e-154 547.0 294 94.9
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 4.0e-141 505.0 301 86.0
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 1.2e-140 503.4 294 88.8
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 1.4e-130 469.9 299 81.3
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 7.0e-130 467.6 297 82.8
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 1.6e-129 466.5 344 73.8
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 5.8e-124 448.0 300 78.7
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 7.0e-122 441.0 303 76.9
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 1.7e-120 436.4 350 70.6
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.4e-117 426.8 392 63.3
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 4.9e-115 418.3 354 66.4
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 1.6e-110 403.3 308 70.8
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.3e-104 383.6 205 98.0
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 9.9e-92 340.9 297 64.0
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 2.1e-89 333.2 288 62.8
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 3.0e-88 329.3 293 62.8
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 6.7e-88 328.2 293 64.2
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.9e-87 326.6 295 64.1
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.3e-86 323.9 295 63.7
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 1.6e-86 323.6 295 63.7
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 1.6e-86 323.6 292 63.4
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 2.8e-86 322.8 292 63.0
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 5.5e-82 308.5 287 58.5
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 2.8e-78 296.2 290 59.0
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 3.7e-78 295.8 305 58.0
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 6.2e-78 295.0 300 57.0
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 8.2e-78 294.7 291 58.4
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 1.1e-77 294.3 300 56.7
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 5.3e-77 292.0 292 58.9
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.2e-76 290.8 295 58.0
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 7.6e-76 288.1 305 57.0
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 1.0e-75 287.7 294 57.1
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 1.3e-75 287.3 302 57.6
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 2.2e-75 286.6 299 59.5
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 1.1e-74 284.3 289 58.8
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 2.5e-74 283.1 303 55.4
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 3.2e-74 282.7 294 56.5
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 4.2e-74 282.3 288 58.0
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 5.5e-74 282.0 303 55.4
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 9.3e-74 281.2 294 56.8
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 1.2e-73 280.8 285 57.2
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 4.6e-73 278.9 287 56.4
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 6.0e-73 278.5 284 56.0
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 6.7e-72 275.0 294 54.1
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 8.7e-72 274.6 300 56.0
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 2.5e-71 273.1 285 56.1
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 3.3e-71 272.7 293 53.2
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 5.7e-71 271.9 301 52.8
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 7.4e-71 271.6 290 56.2
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.6e-70 270.4 299 51.5
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 2.2e-70 270.0 294 55.1
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 3.1e-69 266.2 289 54.3
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.1e-69 265.8 289 54.0
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 9.0e-69 264.6 293 53.2
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 9.0e-69 264.6 294 52.0
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 9.0e-69 264.6 294 54.1
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.2e-68 264.2 289 53.6
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 1.5e-68 263.8 290 54.8
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 2.6e-68 263.1 301 53.5
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 3.4e-68 262.7 294 52.4
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 4.5e-68 262.3 293 49.8
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 5.9e-68 261.9 294 54.4
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.9e-68 261.9 284 54.6
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.0e-67 261.2 283 54.1
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.0e-67 261.2 283 54.1
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.7e-67 260.4 285 55.1
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 5.0e-67 258.8 328 51.5
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 1.4e-66 257.3 311 49.5
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 1.9e-66 256.9 304 52.3
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 5.5e-66 255.4 321 51.1
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 9.4e-66 254.6 275 55.6
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 1.2e-65 254.2 277 53.4
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.6e-65 252.7 300 52.0
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 4.6e-65 252.3 282 54.3
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 6.1e-65 251.9 259 59.1
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 1.4e-64 250.8 283 51.9
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 2.0e-63 246.9 285 50.9
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 5.7e-63 245.4 274 52.9
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 1.3e-62 244.2 297 54.2
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 1.8e-61 240.4 281 49.5
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 1.8e-61 240.4 277 52.0
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 2.6e-60 236.5 301 51.2
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 2.9e-59 233.0 286 50.0
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 4.2e-58 229.2 196 66.3
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 5.7e-55 218.8 122 83.6
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 1.8e-53 213.8 276 45.3
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 9.1e-53 211.5 310 46.1
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 6.1e-49 198.7 107 84.1
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 1.4e-48 197.6 108 85.2
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 3.9e-48 196.1 288 44.8
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 6.3e-46 188.7 107 80.4
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 1.2e-44 184.5 236 50.4
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 2.0e-44 183.7 116 72.4
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 2.6e-44 183.3 135 63.7
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 5.9e-44 182.2 299 42.8
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 8.5e-43 178.3 98 83.7
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 1.1e-42 177.9 138 60.9
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.0e-40 171.4 98 83.7
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 1.4e-40 171.0 125 69.6
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 2.6e-39 166.8 177 49.7
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 1.7e-38 164.1 88 83.0
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 1.2e-36 157.9 219 48.4
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 1.7e-35 154.1 117 68.4
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 2.5e-34 150.2 98 73.5
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 1.6e-33 147.5 98 69.4
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 3.4e-31 139.8 206 46.6
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 2.8e-17 93.6 237 35.0
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 4.7e-17 92.8 208 38.9
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 6.8e-16 89.0 89 52.8
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 6.8e-16 89.0 89 52.8
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 8.9e-16 88.6 89 52.8
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 1.2e-15 88.2 89 52.8
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.2e-15 88.2 188 38.3
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 3.5e-12 76.6 82 52.4
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 1.7e-11 74.3 40 85.0
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 6.2e-09 65.9 197 34.0
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 6.8e-08 62.4 114 43.0
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.2e-07 61.6 197 32.5
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 2.0e-07 60.8 41 65.9
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 2.9e-06 57.0 133 38.3


User provided reference genes

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