Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 3.9e-142 508.1 244 100.0
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 1.3e-81 307.0 166 88.6
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 3.3e-69 265.8 166 78.9
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 3.3e-69 265.8 166 78.9
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 2.6e-66 256.1 168 75.6
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 5.9e-66 255.0 166 77.1
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 5.9e-66 255.0 168 77.4
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 7.7e-66 254.6 166 75.9
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 1.7e-65 253.4 166 75.9
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 1.7e-65 253.4 166 75.9
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 4.2e-64 248.8 166 74.1
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 1.0e-62 244.2 164 75.6
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 5.7e-61 238.4 152 75.7
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 6.8e-46 188.3 170 61.2
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 3.6e-39 166.0 117 65.8
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 4.7e-39 165.6 155 52.3
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 8.0e-39 164.9 112 67.0
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 1.0e-38 164.5 138 58.7
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.3e-38 163.3 149 55.0
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 1.2e-37 161.0 145 57.2
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.5e-37 160.6 148 54.1
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 2.0e-37 160.2 155 54.2
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 2.0e-37 160.2 139 56.8
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 2.0e-37 160.2 147 57.8
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 3.4e-37 159.5 154 55.2
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 4.4e-37 159.1 148 53.4
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 4.4e-37 159.1 114 64.0
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 5.7e-37 158.7 151 55.6
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 7.5e-37 158.3 152 53.9
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 9.8e-37 157.9 152 52.6
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.3e-36 157.5 130 56.2
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.3e-36 157.5 130 56.2
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 1.3e-36 157.5 135 57.8
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 1.7e-36 157.1 139 59.0
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.2e-36 156.8 148 52.7
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 2.8e-36 156.4 157 54.8
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 2.8e-36 156.4 100 70.0
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 3.7e-36 156.0 109 67.0
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 4.9e-36 155.6 91 74.7
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 4.9e-36 155.6 155 50.3
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 8.3e-36 154.8 151 50.3
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 1.1e-35 154.5 113 62.8
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 2.4e-35 153.3 124 58.9
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 3.1e-35 152.9 153 54.9
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 4.1e-35 152.5 167 50.9
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 5.4e-35 152.1 109 62.4
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 5.4e-35 152.1 85 75.3
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 5.4e-35 152.1 157 54.8
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 7.0e-35 151.8 107 60.7
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 7.0e-35 151.8 90 75.6
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 9.2e-35 151.4 102 66.7
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 1.2e-34 151.0 78 80.8
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 1.2e-34 151.0 142 52.1
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 1.6e-34 150.6 148 53.4
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 1.6e-34 150.6 82 81.7
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 2.0e-34 150.2 86 72.1
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 3.5e-34 149.4 99 64.6
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 3.5e-34 149.4 88 68.2
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 1.0e-33 147.9 160 50.0
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 1.0e-33 147.9 99 68.7
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 1.7e-33 147.1 86 72.1
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 2.3e-33 146.7 85 70.6
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 2.3e-33 146.7 91 69.2
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 2.9e-33 146.4 80 76.2
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 3.8e-33 146.0 99 67.7
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 3.8e-33 146.0 157 51.0
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 6.6e-33 145.2 80 77.5
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 3.3e-32 142.9 83 72.3
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 3.3e-32 142.9 127 56.7
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 4.3e-32 142.5 150 50.0
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 4.3e-32 142.5 90 73.3
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 4.3e-32 142.5 93 71.0
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 7.3e-32 141.7 114 55.3
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 9.5e-32 141.4 146 47.9
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 9.5e-32 141.4 101 63.4
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 1.4e-30 137.5 97 64.9
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 3.1e-30 136.3 73 82.2
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 5.2e-30 135.6 118 55.1
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 8.9e-30 134.8 67 82.1
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 2.0e-29 133.7 93 67.7
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 2.0e-29 133.7 66 83.3
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 5.8e-29 132.1 101 60.4
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 8.3e-28 128.3 85 69.4
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 8.3e-28 128.3 134 53.0
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 1.9e-27 127.1 166 44.0
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 1.9e-27 127.1 74 75.7
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 4.1e-27 125.9 112 57.1
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 9.2e-27 124.8 71 74.6
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 1.6e-26 124.0 63 84.1
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 2.7e-26 123.2 144 50.0
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 6.0e-26 122.1 148 43.9
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 6.0e-26 122.1 65 75.4
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 7.8e-26 121.7 66 77.3
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 5.6e-24 115.5 68 73.5
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 6.2e-23 112.1 72 59.7
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 9.8e-21 104.8 68 67.6
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 1.3e-20 104.4 68 69.1
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 1.9e-19 100.5 76 63.2
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 1.0e-17 94.7 100 51.0
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 1.7e-17 94.0 63 55.6
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 1.2e-07 61.2 36 72.2


User provided reference genes

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