Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G20110 Arabidopsis lyrata HOM05D005866 ORTHO05D007078 1.8e-110 402.9 255 100.0
AT3G09050 Arabidopsis thaliana HOM05D005866 ORTHO05D007078 5.9e-101 371.3 254 93.7
Carub.0003s0821 Capsella rubella HOM05D005866 ORTHO05D007078 6.1e-98 361.3 254 83.9
Sp3g07500 Schrenkiella parvula HOM05D005866 ORTHO05D007078 1.1e-96 357.1 254 87.8
Thhalv10021354m.g Eutrema salsugineum HOM05D005866 ORTHO05D007078 1.3e-95 353.6 254 86.2
CARHR083410 Cardamine hirsuta HOM05D005866 ORTHO05D007078 4.8e-95 351.7 256 88.3
BcaC05g29639 Brassica carinata HOM05D005866 ORTHO05D007078 2.0e-93 346.3 254 86.6
C05p58830 Brassica napus HOM05D005866 ORTHO05D007078 3.2e-91 339.0 254 84.6
BolC5t34535H Brassica oleracea HOM05D005866 ORTHO05D007078 5.5e-91 338.2 254 84.6
A05p39790 Brassica napus HOM05D005866 ORTHO05D007078 7.2e-91 337.8 254 84.6
BraA05t22763Z Brassica rapa HOM05D005866 ORTHO05D007078 7.2e-91 337.8 254 84.6
Aa31LG3G1580 Aethionema arabicum HOM05D005866 ORTHO05D007078 4.7e-90 335.1 253 71.5
BraA01t04319Z Brassica rapa HOM05D005866 ORTHO05D007078 1.2e-88 330.5 255 75.3
BcaC09g48050 Brassica carinata HOM05D005866 ORTHO05D007078 4.1e-86 322.0 255 79.2
BolC1t05477H Brassica oleracea HOM05D005866 ORTHO05D007078 1.5e-83 313.5 255 78.0
BcaC09g48005 Brassica carinata HOM05D005866 ORTHO05D007078 8.8e-81 304.3 272 73.5
BcaC09g48006 Brassica carinata HOM05D005866 ORTHO05D007078 5.0e-68 261.9 272 59.6
THA.LOC104816219 Tarenaya hassleriana HOM05D005866 ORTHO05D007078 4.4e-64 248.8 253 65.6
CiPaw.09G206400 Carya illinoinensis HOM05D005866 ORTHO05D007078 4.1e-62 242.3 249 59.0
Potri.006G096700 Populus trichocarpa HOM05D005866 ORTHO05D007078 1.2e-58 230.7 246 52.0
Thecc.05G021700 Theobroma cacao HOM05D005866 ORTHO05D007078 1.2e-58 230.7 251 60.2
TWI74G1551 Tripterygium wilfordii HOM05D005866 ORTHO05D007078 6.2e-58 228.4 248 63.7
Gohir.D01G215200 Gossypium hirsutum HOM05D005866 ORTHO05D007078 1.2e-56 224.2 256 53.1
Cpa.g.sc56.117 Carica papaya HOM05D005866 ORTHO05D007078 1.5e-56 223.8 244 63.5
Duzib128G1899 Durio zibethinus HOM05D005866 ORTHO05D007078 1.5e-56 223.8 244 60.2
Sabra06G0074300 Salix brachista HOM05D005866 ORTHO05D007078 1.5e-56 223.8 252 57.1
CSS0007949 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 2.2e-55 219.9 262 62.6
CSS0025068 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 2.2e-55 219.9 262 62.6
FAN09G2814 Fragaria x ananassa HOM05D000012 ORTHO05D007078 2.9e-55 219.5 246 54.5
Dinv35509 Davidia involucrata HOM05D005866 ORTHO05D007078 3.7e-55 219.2 246 61.0
Dinv14530 Davidia involucrata HOM05D005866 ORTHO05D007078 8.3e-55 218.0 246 60.6
FAN14G3518 Fragaria x ananassa HOM05D005866 ORTHO05D007078 1.9e-54 216.9 247 50.6
MD04G1147400 Malus domestica HOM05D005866 ORTHO05D007078 5.4e-54 215.3 245 51.4
CsaV3_4G026010 Cucumis sativus L. HOM05D005866 ORTHO05D007078 2.1e-53 213.4 240 51.7
ECA247G0127 Erigeron canadensis HOM05D005866 ORTHO05D007078 3.5e-53 212.6 250 55.6
Ciclev10012537m.g Citrus clementina HOM05D005866 ORTHO05D007078 7.8e-53 211.5 249 58.2
ClCG04G007220 Citrullus lanatus HOM05D005866 ORTHO05D007078 1.0e-52 211.1 194 66.0
FAN14G3397 Fragaria x ananassa HOM05D000012 ORTHO05D000567 3.9e-52 209.1 247 52.6
FvH4_6g11980 Fragaria vesca HOM05D005866 ORTHO05D007078 6.6e-52 208.4 246 52.8
Sed0005881 Sechium edule HOM05D005866 ORTHO05D007078 1.5e-51 207.2 240 55.8
MELO3C003227.2 Cucumis melo HOM05D005866 ORTHO05D007078 2.5e-51 206.5 194 65.5
Prupe.6G271100 Prunus persica HOM05D000012 ORTHO05D000567 3.3e-51 206.1 245 55.5
FAN05G0379 Fragaria x ananassa HOM05D000012 ORTHO05D000567 4.3e-51 205.7 246 56.9
AUR62042946 Chenopodium quinoa HOM05D005866 ORTHO05D007078 5.6e-51 205.3 195 55.4
PGR031G2542 Punica granatum HOM05D005866 ORTHO05D007078 5.6e-51 205.3 255 60.4
FAN02G1355 Fragaria x ananassa HOM05D005866 ORTHO05D007078 1.2e-50 204.1 246 52.0
Gohir.A01G225500 Gossypium hirsutum HOM05D005866 ORTHO05D007078 1.6e-50 203.8 256 57.4
Manes.09G102400 Manihot esculenta HOM05D005866 ORTHO05D007078 2.1e-50 203.4 243 57.2
Haze_20956 Corylus avellana HOM05D005866 ORTHO05D007078 1.1e-49 201.1 251 55.4
AUR62025814 Chenopodium quinoa HOM05D005866 ORTHO05D007078 1.4e-49 200.7 194 53.6
Aqoxy1G00701 Aquilegia oxysepala HOM05D005866 ORTHO05D007078 1.8e-49 200.3 251 47.0
Lsat_1_v5_gn_9_36061 Lactuca sativa HOM05D005866 ORTHO05D007078 2.3e-49 199.9 256 56.6
Peaxi162Scf00141g00718 Petunia axillaris HOM05D005866 ORTHO05D007078 4.0e-49 199.1 251 60.2
Atru.chr8.2203 Acer truncatum HOM05D005866 ORTHO05D007078 5.2e-49 198.7 253 52.2
Sc01g0006840 Simmondsia chinensis HOM05D005866 ORTHO05D007078 8.9e-49 198.0 247 58.7
Nitab4.5_0004912g0060 Nicotiana tabacum HOM05D005866 ORTHO05D007078 1.5e-48 197.2 195 64.6
COL.COLO4_14593 Corchorus olitorius HOM05D005866 ORTHO05D007078 2.6e-48 196.4 253 59.7
Glyma.07G145800 Glycine max HOM05D005866 ORTHO05D007078 2.6e-48 196.4 248 46.8
GSVIVG01034004001 Vitis vinifera HOM05D000012 ORTHO05D000567 3.4e-48 196.1 245 56.3
unitig_578.g15896 Utricularia gibba HOM05D005866 ORTHO05D007078 1.7e-47 193.7 202 62.9
Glyma.18G197300 Glycine max HOM05D005866 ORTHO05D007078 4.9e-47 192.2 246 45.9
PGSC0003DMG400011090 Solanum tuberosum HOM05D005866 ORTHO05D007078 1.9e-46 190.3 251 53.8
vmacro08602 Vaccinium macrocarpon HOM05D005866 ORTHO05D007078 3.2e-46 189.5 255 55.7
Lj2C80T14 Lonicera japonica HOM05D005866 ORTHO05D007078 4.1e-46 189.1 223 50.2
TPR.G1580 Trifolium pratense HOM05D005866 ORTHO05D007078 1.2e-45 187.6 250 46.0
Nn2g11373 Nelumbo nucifera HOM05D005866 ORTHO05D007078 1.6e-45 187.2 195 65.1
DCAR_015452 Daucus carota HOM05D005866 ORTHO05D007078 3.5e-45 186.0 243 53.9
Lalb_Chr07g0193301 Lupinus albus HOM05D005866 ORTHO05D007078 3.5e-45 186.0 253 46.6
Eucgr.B02792 Eucalyptus grandis HOM05D005866 ORTHO05D007078 6.0e-45 185.3 196 63.8
TAR623G0986 Trochodendron aralioides HOM05D005866 ORTHO05D007078 6.0e-45 185.3 249 51.4
Lj3g0009346 Lotus japonicus HOM05D005866 ORTHO05D007078 7.8e-45 184.9 235 46.4
Phvul.008G107300 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 7.8e-45 184.9 235 50.6
VMungo1383G0141 Vigna mungo HOM05D005866 ORTHO05D007078 7.8e-45 184.9 241 47.3
Sopen10g034540 Solanum pennellii HOM05D005866 ORTHO05D007078 1.7e-44 183.7 251 52.2
Gorai.002G261300 Gossypium raimondii HOM05D005866 ORTHO05D007078 1.1e-43 181.0 256 54.3
Psat7g247600 Pisum sativum HOM05D005866 ORTHO05D007078 1.1e-43 181.0 251 44.2
Ah.12g060060 Amaranthus hybridus HOM05D005866 ORTHO05D007078 1.5e-43 180.6 199 59.8
arahy.Tifrunner.gnm1.ann1.Q1H550 Arachis hypogaea HOM05D005866 ORTHO05D007078 2.5e-43 179.9 203 52.7
Medtr7g067000 Medicago truncatula HOM05D005866 ORTHO05D007078 3.3e-43 179.5 223 48.0
CAN.G1297.4 Capsicum annuum HOM05D005866 ORTHO05D007078 4.3e-43 179.1 192 63.5
Ca_07614_v3 Cicer arietinum L. HOM05D005866 ORTHO05D007078 1.2e-42 177.6 223 46.2
Sopen09g007090 Solanum pennellii HOM05D005866 ORTHO05D007078 1.2e-42 177.6 246 54.5
Hund02698 Selenicereus undatus HOM05D005866 ORTHO05D007078 6.2e-42 175.3 260 41.5
Lj1g0011685 Lotus japonicus HOM05D005866 ORTHO05D007078 8.1e-42 174.9 228 43.9
ECA247G1841 Erigeron canadensis HOM05D005866 ORTHO05D007078 1.4e-41 174.1 212 54.7
Psat3g131120 Pisum sativum HOM05D005866 ORTHO05D007078 1.4e-41 174.1 195 49.2
Nitab4.5_0001837g0050 Nicotiana tabacum HOM05D005866 ORTHO05D007078 4.0e-41 172.6 252 56.0
Solyc10g085080.3 Solanum lycopersicum HOM05D005866 ORTHO05D007078 2.6e-40 169.9 267 48.7
Cc06_g01630 Coffea canephora HOM05D005866 ORTHO05D007078 3.4e-40 169.5 256 50.8
Nitab4.5_0000652g0170 Nicotiana tabacum HOM05D005866 ORTHO05D007078 7.6e-40 168.3 179 63.1
SGA_v2.0_scaffold85G26760 Striga asiatica HOM05D005866 ORTHO05D007078 7.6e-40 168.3 136 61.8
Nitab4.5_0000008g0810 Nicotiana tabacum HOM05D005866 ORTHO05D007078 9.9e-40 167.9 252 54.0
arahy.Tifrunner.gnm1.ann1.LP8IIZ Arachis hypogaea HOM05D005866 ORTHO05D007078 2.9e-39 166.4 201 47.3
Medtr4g015010 Medicago truncatula HOM05D005866 ORTHO05D007078 2.9e-39 166.4 240 52.5
VMungo0331G1214 Vigna mungo HOM05D005866 ORTHO05D007078 3.8e-39 166.0 239 50.6
Phvul.010G008600 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 1.4e-38 164.1 242 51.2
Zm00001eb367320 Zea mays HOM05D005866 ORTHO05D007078 1.9e-38 163.7 203 51.2
TPR.G5230 Trifolium pratense HOM05D005866 ORTHO05D007078 2.4e-38 163.3 247 51.4
PSO384G0902 Papaver somniferum HOM05D005866 ORTHO05D007078 3.2e-38 162.9 248 48.0
CDE03G0505 Ceratophyllum demersum HOM05D005866 ORTHO05D007078 7.1e-38 161.8 196 56.1
CAN.G338.58 Capsicum annuum HOM05D005866 ORTHO05D007078 2.1e-37 160.2 251 52.2
MSTRG.5595 Avicennia marina HOM05D005866 ORTHO05D007078 2.7e-37 159.8 195 57.4
Os01g0853000 Oryza sativa ssp. japonica HOM05D005866 ORTHO05D007078 3.5e-37 159.5 205 51.2
RcHm_v2.0_Chr3g0463811 Rosa chinensis HOM05D005866 ORTHO05D007078 6.0e-37 158.7 133 61.7
arahy.Tifrunner.gnm1.ann1.QNAF0W Arachis hypogaea HOM05D005866 ORTHO05D007078 7.8e-37 158.3 203 47.3
PGSC0003DMG400020319 Solanum tuberosum HOM05D005866 ORTHO05D007078 5.1e-36 155.6 245 47.8
CANSAT35G0638 Cannabis sativa HOM05D005866 ORTHO05D007078 8.7e-36 154.8 252 48.8
Solyc09g014215.2 Solanum lycopersicum HOM05D005866 ORTHO05D007078 5.6e-35 152.1 247 50.2
arahy.Tifrunner.gnm1.ann1.T33YJ3 Arachis hypogaea HOM05D005866 ORTHO05D007078 9.6e-35 151.4 196 45.9
arahy.Tifrunner.gnm1.ann1.F83RTD Arachis hypogaea HOM05D005866 ORTHO05D007078 1.3e-34 151.0 196 45.9
TAR633G2503 Trochodendron aralioides HOM05D005866 ORTHO05D007078 5.3e-33 145.6 129 58.9
Migut.J00221 Erythranthe guttata HOM05D005866 ORTHO05D007078 2.0e-32 143.7 246 53.3
EL10Ac6g13875 Beta vulgaris HOM05D005866 ORTHO05D007078 3.4e-32 142.9 121 60.3
arahy.Tifrunner.gnm1.ann1.6JA19R Arachis hypogaea HOM05D005866 ORTHO05D007078 1.1e-30 137.9 166 47.6
Lj2P1203T18 Lonicera japonica HOM05D005866 ORTHO05D007078 9.3e-30 134.8 135 54.8
PSO339G5866 Papaver somniferum HOM05D005866 ORTHO05D007078 1.0e-28 131.3 181 53.0
Peaxi162Scf00009g01923 Petunia axillaris HOM05D005866 ORTHO05D007078 1.7e-28 130.6 253 39.9
Glyma.03G077300 Glycine max HOM05D005866 ORTHO05D007078 3.9e-28 129.4 193 52.3
Actinidia05342 Actinidia chinensis HOM05D005866 ORTHO05D007078 1.9e-27 127.1 181 49.7
ATR0618G104 Amborella trichopoda HOM05D005866 ORTHO05D007078 2.6e-24 116.7 130 48.5
AagrBONN_evm.TU.Sc2ySwM_117.2545 Anthoceros agrestis HOM05D005866 ORTHO05D007078 7.6e-24 115.2 205 34.1
SEGI_33363 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 2.1e-21 107.1 203 31.5
Pp3c5_19930 Physcomitrium patens HOM05D005866 ORTHO05D007078 2.5e-19 100.1 203 31.0
Mapoly0004s0086 Marchantia polymorpha HOM05D005866 ORTHO05D007078 4.3e-19 99.4 195 32.3
SMO143G0029 Selaginella moellendorffii HOM05D001879 ORTHO05D007648 8.1e-18 95.1 207 29.0
SEGI_17473 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 4.0e-17 92.8 181 30.9
Dinv37082 Davidia involucrata HOM05D005866 ORTHO05D007078 4.5e-16 89.4 97 48.5
Actinidia01118 Actinidia chinensis HOM05D005866 ORTHO05D007078 1.7e-15 87.4 83 54.2
Ah.07g199780 Amaranthus hybridus HOM05D005866 ORTHO05D007078 1.0e-12 78.2 79 46.8
Mapoly0010s0127 Marchantia polymorpha HOM05D005866 ORTHO05D007078 6.7e-12 75.5 236 26.3
Pp3c20_9600 Physcomitrium patens HOM05D005866 ORTHO05D007078 6.7e-12 75.5 206 28.2
HanXRQChr10g0287001 Helianthus annuus HOM05D005866 ORTHO05D007078 1.4e-09 67.8 91 44.0
Pp3c23_6870 Physcomitrium patens HOM05D005866 ORTHO05D007078 1.2e-08 64.7 206 25.2
Lalb_Chr03g0043011 Lupinus albus HOM05D005866 ORTHO05D007078 3.2e-06 56.6 76 42.1
SGA_v2.0_scaffold1443G53951 Striga asiatica HOM05D005866 ORTHO05D007078 7.2e-06 55.5 35 71.4
Actinidia01119 Actinidia chinensis HOM05D005866 ORTHO05D007078 9.3e-06 55.1 90 41.1


User provided reference genes

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