Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 1.8e-168 595.9 313 100.0
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 4.9e-158 561.2 314 94.6
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 1.9e-149 532.7 314 88.9
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 6.2e-145 517.7 314 86.9
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 4.5e-143 511.5 313 85.6
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 3.3e-138 495.4 315 83.2
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 5.1e-131 471.5 318 79.2
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 1.8e-128 463.0 297 82.5
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 9.1e-128 460.7 317 78.2
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 2.7e-124 449.1 317 76.7
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 1.0e-123 447.2 318 76.1
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 4.1e-120 435.3 315 74.0
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 4.1e-104 382.1 271 76.0
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 1.7e-102 376.7 314 65.0
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 4.9e-89 332.0 311 58.2
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 2.4e-88 329.7 315 58.7
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 1.5e-85 320.5 321 55.5
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 1.6e-84 317.0 319 54.9
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 1.6e-84 317.0 319 55.5
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 5.2e-83 312.0 319 54.2
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 6.4e-81 305.1 316 53.8
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 5.4e-80 302.0 315 53.3
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 5.4e-80 302.0 312 55.8
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.2e-79 300.8 310 54.8
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 1.6e-79 300.4 310 55.5
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 4.6e-79 298.9 311 54.3
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 1.3e-78 297.4 312 54.2
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.3e-78 296.6 310 54.2
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 2.3e-78 296.6 324 52.8
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 3.0e-78 296.2 314 54.5
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 3.9e-78 295.8 321 53.0
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 5.0e-78 295.4 310 54.2
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.1e-77 294.3 313 55.3
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 1.9e-77 293.5 311 53.7
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 1.9e-77 293.5 316 53.8
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 7.3e-77 291.6 318 53.8
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 3.6e-76 289.3 313 54.3
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 4.7e-76 288.9 313 52.7
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 6.2e-76 288.5 321 52.0
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 1.1e-75 287.7 323 51.4
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.3e-73 280.8 313 54.0
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 2.2e-73 280.0 311 51.4
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 4.9e-73 278.9 300 54.7
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 1.9e-72 276.9 311 51.8
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 2.4e-72 276.6 333 51.1
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 4.1e-72 275.8 315 52.1
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 9.2e-72 274.6 326 50.0
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 1.6e-71 273.9 317 50.8
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 1.6e-71 273.9 311 51.4
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 1.7e-70 270.4 314 50.3
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 1.1e-69 267.7 337 49.3
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 1.1e-69 267.7 314 49.7
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.5e-69 267.3 314 50.3
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 1.5e-69 267.3 309 49.5
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 3.3e-69 266.2 314 50.3
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 1.2e-68 264.2 299 50.2
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 1.6e-68 263.8 320 50.6
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 1.4e-67 260.8 329 49.8
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 6.8e-67 258.5 314 49.4
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 6.8e-67 258.5 314 49.4
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 7.5e-66 255.0 314 49.4
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 9.9e-66 254.6 317 49.8
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 1.3e-65 254.2 340 47.4
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 2.9e-65 253.1 319 46.4
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 4.9e-65 252.3 322 49.4
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 1.2e-63 247.7 322 46.0
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 4.6e-63 245.7 316 47.8
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 2.3e-62 243.4 319 45.1
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 5.6e-61 238.8 315 48.9
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 9.5e-61 238.0 319 42.9
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 1.2e-60 237.7 319 42.9
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 1.6e-60 237.3 314 46.2
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 4.7e-60 235.7 307 46.3
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 6.2e-60 235.3 310 47.1
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 8.1e-60 235.0 312 47.4
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 3.1e-59 233.0 318 44.0
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 1.5e-58 230.7 305 46.2
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 2.6e-58 229.9 314 43.9
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 2.9e-57 226.5 311 42.1
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 4.2e-56 222.6 311 42.1
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 7.1e-56 221.9 310 46.8
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 3.5e-55 219.5 324 43.5
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 7.8e-55 218.4 302 43.4
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 1.0e-54 218.0 325 42.2
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 1.7e-54 217.2 309 42.1
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 2.3e-54 216.9 301 43.2
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 3.9e-54 216.1 298 46.0
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 1.1e-53 214.5 328 39.6
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 1.2e-52 211.1 309 43.0
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 6.9e-51 205.3 320 41.9
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 9.0e-51 204.9 310 41.3
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 1.5e-50 204.1 306 42.8
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 1.1e-48 198.0 313 39.9
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 1.2e-47 194.5 301 41.9
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 2.1e-47 193.7 307 40.1
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 1.7e-46 190.7 308 41.9
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 3.9e-46 189.5 309 41.1
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 9.0e-43 178.3 300 42.0
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 4.5e-42 176.0 200 48.5
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 1.5e-37 161.0 233 41.2
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 1.9e-37 160.6 180 47.8
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 2.5e-37 160.2 351 35.0
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 1.1e-35 154.8 393 31.3
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 5.3e-35 152.5 297 36.7
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 1.5e-34 151.0 183 47.5
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 1.5e-29 134.4 182 50.0
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 9.6e-29 131.7 304 34.2
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 9.6e-29 131.7 305 33.8
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 3.1e-27 126.7 168 45.8
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 1.0e-25 121.7 133 48.1
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 3.8e-25 119.8 304 33.2
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 3.2e-24 116.7 389 27.0
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 2.1e-23 114.0 336 28.9
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 4.1e-19 99.8 287 31.0
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 1.2e-18 98.2 88 59.1
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 6.7e-14 82.4 65 63.1
Mapoly0060s0108 Marchantia polymorpha HOM05D006207 ORTHO05D007868 6.3e-12 75.9 121 36.4
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 5.3e-11 72.8 98 44.9
VMungo1215G0839 Vigna mungo HOM05D006207 ORTHO05D007868 3.4e-10 70.1 77 46.8
BraA04t16351Z Brassica rapa HOM05D006207 ORTHO05D007868 1.9e-08 64.3 45 75.6
VMungo1309G1345 Vigna mungo HOM05D006207 ORTHO05D007868 5.1e-06 56.2 69 46.4


User provided reference genes

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