Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G16790 Arabidopsis lyrata HOM05D005221 ORTHO05D006355 4.1e-115 418.3 249 100.0
AT3G05980 Arabidopsis thaliana HOM05D005221 ORTHO05D006355 4.3e-104 381.7 249 92.4
Carub.0003s0539 Capsella rubella HOM05D005221 ORTHO05D006355 2.7e-98 362.5 250 90.8
BraA05t22925Z Brassica rapa HOM05D005221 ORTHO05D006355 6.2e-87 324.7 249 83.1
A05p42050 Brassica napus HOM05D005221 ORTHO05D006355 8.3e-84 314.3 249 82.3
Thhalv10021379m.g Eutrema salsugineum HOM05D005221 ORTHO05D006355 1.1e-83 313.9 254 79.9
BcaC05g30072 Brassica carinata HOM05D005221 ORTHO05D006355 1.2e-82 310.5 251 81.7
CARHR080490 Cardamine hirsuta HOM05D005221 ORTHO05D006355 1.7e-81 306.6 254 80.3
C05p61280 Brassica napus HOM05D005221 ORTHO05D006355 5.1e-81 305.1 251 80.9
BolC5t34787H Brassica oleracea HOM05D005221 ORTHO05D006355 5.1e-81 305.1 251 80.9
Sp3g04920 Schrenkiella parvula HOM05D005221 ORTHO05D006355 6.6e-81 304.7 253 78.7
BraA01t04457Z Brassica rapa HOM05D005221 ORTHO05D006355 3.6e-79 298.9 250 76.8
Aa31LG5G16450 Aethionema arabicum HOM05D005221 ORTHO05D006355 5.8e-69 265.0 247 70.9
BcaC09g47869 Brassica carinata HOM05D005221 ORTHO05D006355 4.8e-63 245.4 246 67.9
BolC1t05645H Brassica oleracea HOM05D005221 ORTHO05D006355 1.1e-62 244.2 248 67.3
THA.LOC104802759 Tarenaya hassleriana HOM05D005221 ORTHO05D006355 2.9e-52 209.5 247 58.7
BraA03t10262Z Brassica rapa HOM05D005221 ORTHO05D006355 4.9e-52 208.8 254 58.7
Thhalv10016073m.g Eutrema salsugineum HOM05D005221 ORTHO05D006355 6.4e-52 208.4 254 57.5
THA.LOC104818779 Tarenaya hassleriana HOM05D005221 ORTHO05D006355 8.4e-52 208.0 247 64.4
BolC3t13571H Brassica oleracea HOM05D005221 ORTHO05D006355 2.1e-50 203.4 245 58.0
Thecc.04G227300 Theobroma cacao HOM05D005221 ORTHO05D006355 8.7e-49 198.0 257 56.8
BolC9t58548H Brassica oleracea HOM05D005221 ORTHO05D006355 1.1e-48 197.6 272 53.7
C03p11020 Brassica napus HOM05D005221 ORTHO05D006355 1.9e-48 196.8 245 58.4
A03p09440 Brassica napus HOM05D005221 ORTHO05D006355 3.3e-48 196.1 246 55.7
Carub.0006s1768 Capsella rubella HOM05D005221 ORTHO05D006355 2.8e-47 193.0 257 54.1
Potri.010G090700 Populus trichocarpa HOM05D005221 ORTHO05D006355 4.8e-47 192.2 230 53.5
Duzib151G0158 Durio zibethinus HOM05D005221 ORTHO05D006355 6.2e-47 191.8 250 51.2
Nn4g26263 Nelumbo nucifera HOM05D005221 ORTHO05D006355 6.2e-47 191.8 240 49.6
Duzib212G0790 Durio zibethinus HOM05D005221 ORTHO05D006355 1.1e-46 191.0 247 52.6
Manes.03G181200 Manihot esculenta HOM05D005221 ORTHO05D006355 1.8e-46 190.3 245 49.0
A10p20340 Brassica napus HOM05D005221 ORTHO05D006355 2.4e-46 189.9 273 52.7
BraA10t44105Z Brassica rapa HOM05D005221 ORTHO05D006355 2.4e-46 189.9 273 52.7
Cpa.g.sc8.322 Carica papaya HOM05D005221 ORTHO05D006355 2.4e-46 189.9 247 51.0
AT5G19340 Arabidopsis thaliana HOM05D005221 ORTHO05D006355 3.1e-46 189.5 266 53.0
TWI53G0458 Tripterygium wilfordii HOM05D005221 ORTHO05D006355 6.9e-46 188.3 237 50.6
BcaB01g05141 Brassica carinata HOM05D005221 ORTHO05D006355 1.2e-45 187.6 240 56.2
BcaC04g18576 Brassica carinata HOM05D005221 ORTHO05D006355 2.6e-45 186.4 275 51.6
C09p56940 Brassica napus HOM05D005221 ORTHO05D006355 2.6e-45 186.4 275 51.6
Gohir.A09G214300 Gossypium hirsutum HOM05D005221 ORTHO05D006355 3.4e-45 186.0 235 62.1
CSS0023930 Camellia sinensis var. sinensis HOM05D005221 ORTHO05D006355 4.5e-45 185.7 234 49.1
FAN07G2107 Fragaria x ananassa HOM05D005221 ORTHO05D006355 7.6e-45 184.9 252 48.4
QL06p003360 Quercus lobata HOM05D005221 ORTHO05D006355 1.3e-44 184.1 250 51.2
FAN12G4146 Fragaria x ananassa HOM05D005221 ORTHO05D006355 2.2e-44 183.3 252 48.0
COL.COLO4_06196 Corchorus olitorius HOM05D005221 ORTHO05D006355 2.9e-44 183.0 263 48.3
FvH4_4g15060 Fragaria vesca HOM05D005221 ORTHO05D006355 2.9e-44 183.0 250 48.4
FAN22G0945 Fragaria x ananassa HOM05D005221 ORTHO05D006355 2.9e-44 183.0 248 47.2
Potri.008G150300 Populus trichocarpa HOM05D005221 ORTHO05D006355 2.9e-44 183.0 231 51.9
RcHm_v2.0_Chr4g0416801 Rosa chinensis HOM05D005221 ORTHO05D006355 3.8e-44 182.6 251 49.0
Sed0008919 Sechium edule HOM05D005221 ORTHO05D006355 4.9e-44 182.2 249 48.6
BcaB01g04866 Brassica carinata HOM05D005221 ORTHO05D006355 6.5e-44 181.8 246 53.7
Cfa015617 Carpinus fangiana HOM05D005221 ORTHO05D006355 6.5e-44 181.8 249 56.2
Oeu037551.1 Olea europaea HOM05D005221 ORTHO05D006355 1.1e-43 181.0 251 47.4
MD16G1188800 Malus domestica HOM05D005221 ORTHO05D006355 1.4e-43 180.6 235 50.2
Sabra08G0114400 Salix brachista HOM05D005221 ORTHO05D006355 1.9e-43 180.3 230 51.3
Prupe.1G155500 Prunus persica HOM05D005221 ORTHO05D006355 2.5e-43 179.9 249 50.2
AL6G30830 Arabidopsis lyrata HOM05D005221 ORTHO05D006355 5.5e-43 178.7 253 53.4
Sabra10G0052800 Salix brachista HOM05D005221 ORTHO05D006355 7.1e-43 178.3 246 47.2
Gorai.006G237300 Gossypium raimondii HOM05D005221 ORTHO05D006355 1.6e-42 177.2 237 61.2
Sp6g25070 Schrenkiella parvula HOM05D005221 ORTHO05D006355 2.7e-42 176.4 259 51.0
Duzib052G0196 Durio zibethinus HOM05D005221 ORTHO05D006355 3.5e-42 176.0 236 49.2
Nitab4.5_0000260g0100 Nicotiana tabacum HOM05D005221 ORTHO05D006355 3.5e-42 176.0 244 47.5
Gohir.D09G216800 Gossypium hirsutum HOM05D005221 ORTHO05D006355 4.6e-42 175.6 237 60.8
Nn1g02242 Nelumbo nucifera HOM05D005221 ORTHO05D006355 6.0e-42 175.3 253 47.8
TAR362G0899 Trochodendron aralioides HOM05D005221 ORTHO05D006355 1.0e-41 174.5 232 48.3
Cc03_g03470 Coffea canephora HOM05D005221 ORTHO05D006355 1.3e-41 174.1 238 46.2
Sed0012211 Sechium edule HOM05D005221 ORTHO05D006355 1.3e-41 174.1 246 46.7
ECA234G2268 Erigeron canadensis HOM05D005221 ORTHO05D006355 1.8e-41 173.7 239 52.7
CiPaw.02G095300 Carya illinoinensis HOM05D005221 ORTHO05D006355 2.3e-41 173.3 248 47.6
MELO3C014491.2 Cucumis melo HOM05D005221 ORTHO05D006355 5.1e-41 172.2 244 54.5
Lj5g0028012 Lotus japonicus HOM05D005221 ORTHO05D006355 6.7e-41 171.8 234 47.9
TWI09G0254 Tripterygium wilfordii HOM05D005221 ORTHO05D006355 6.7e-41 171.8 237 48.9
ClCG06G006000 Citrullus lanatus HOM05D005221 ORTHO05D006355 1.1e-40 171.0 240 55.0
Ca_10924_v3 Cicer arietinum L. HOM05D005221 ORTHO05D006355 1.5e-40 170.6 256 47.3
CsaV3_6G038280 Cucumis sativus L. HOM05D005221 ORTHO05D006355 1.5e-40 170.6 244 57.8
Nitab4.5_0001545g0020 Nicotiana tabacum HOM05D005221 ORTHO05D006355 1.9e-40 170.2 249 46.6
Manes.15G026700 Manihot esculenta HOM05D005221 ORTHO05D006355 2.5e-40 169.9 249 48.2
MD13G1188400 Malus domestica HOM05D005221 ORTHO05D006355 5.7e-40 168.7 242 45.9
TPR.G5529 Trifolium pratense HOM05D005221 ORTHO05D006355 7.4e-40 168.3 237 46.4
Peaxi162Scf00437g00052 Petunia axillaris HOM05D005221 ORTHO05D006355 9.7e-40 167.9 249 43.0
Peaxi162Scf00642g00022 Petunia axillaris HOM05D005221 ORTHO05D006355 9.7e-40 167.9 246 45.5
VMungo0720G0147 Vigna mungo HOM05D005221 ORTHO05D006355 1.6e-39 167.2 238 56.3
Glyma.20G143700 Glycine max HOM05D005221 ORTHO05D006355 2.2e-39 166.8 244 54.5
MSTRG.21844 Avicennia marina HOM05D005221 ORTHO05D006355 2.8e-39 166.4 237 44.7
CAN.G668.8 Capsicum annuum HOM05D005221 ORTHO05D006355 3.7e-39 166.0 251 42.6
Rhsim04G0205100 Rhododendron simsii HOM05D005221 ORTHO05D006355 3.7e-39 166.0 235 45.5
CAN.G873.5 Capsicum annuum HOM05D005221 ORTHO05D006355 6.3e-39 165.2 247 46.2
CARHR193620 Cardamine hirsuta HOM05D005221 ORTHO05D006355 6.3e-39 165.2 250 52.0
EL10As3g23360 Beta vulgaris HOM05D005221 ORTHO05D006355 8.2e-39 164.9 266 42.1
Ciclev10005615m.g Citrus clementina HOM05D005221 ORTHO05D006355 1.4e-38 164.1 249 47.4
Lj3P740T18 Lonicera japonica HOM05D005221 ORTHO05D006355 1.4e-38 164.1 236 55.5
Aqoxy2G03348 Aquilegia oxysepala HOM05D005221 ORTHO05D006355 4.1e-38 162.5 232 45.7
CiPaw.01G163700 Carya illinoinensis HOM05D005221 ORTHO05D006355 4.1e-38 162.5 225 48.9
Lsat_1_v5_gn_5_148500 Lactuca sativa HOM05D005221 ORTHO05D006355 6.9e-38 161.8 242 52.9
Sopen06g019400 Solanum pennellii HOM05D005221 ORTHO05D006355 6.9e-38 161.8 246 46.3
Solyc06g054280.1 Solanum lycopersicum HOM05D005221 ORTHO05D006355 9.0e-38 161.4 246 44.7
Phvul.007G054700 Phaseolus vulgaris HOM05D005221 ORTHO05D006355 1.2e-37 161.0 238 55.5
Actinidia23488 Actinidia chinensis HOM05D005221 ORTHO05D006355 1.5e-37 160.6 237 43.9
Medtr1g104840 Medicago truncatula HOM05D005221 ORTHO05D006355 1.5e-37 160.6 236 46.2
Sc13g0004240 Simmondsia chinensis HOM05D005221 ORTHO05D006355 2.0e-37 160.2 267 44.6
Solyc09g075740.1 Solanum lycopersicum HOM05D005221 ORTHO05D006355 2.0e-37 160.2 248 49.6
DCAR_030618 Daucus carota HOM05D005221 ORTHO05D006355 2.6e-37 159.8 250 47.2
Glyma.10G249900 Glycine max HOM05D005221 ORTHO05D006355 4.5e-37 159.1 244 50.0
Sopen09g030550 Solanum pennellii HOM05D005221 ORTHO05D006355 7.6e-37 158.3 248 48.8
PGSC0003DMG400011822 Solanum tuberosum HOM05D005221 ORTHO05D006355 7.6e-37 158.3 246 44.3
Dinv38425 Davidia involucrata HOM05D005221 ORTHO05D006355 2.9e-36 156.4 178 55.6
Eucgr.B01092 Eucalyptus grandis HOM05D005221 ORTHO05D006355 2.9e-36 156.4 277 43.0
PGR142G0441 Punica granatum HOM05D005221 ORTHO05D006355 3.8e-36 156.0 265 48.3
Lalb_Chr06g0160581 Lupinus albus HOM05D005221 ORTHO05D006355 5.0e-36 155.6 242 52.9
TAR636G2071 Trochodendron aralioides HOM05D002203 ORTHO05D002647 5.0e-36 155.6 149 55.0
BcaB08g36581 Brassica carinata HOM05D005221 ORTHO05D006355 6.5e-36 155.2 263 48.7
HanXRQChr10g0296561 Helianthus annuus HOM05D005221 ORTHO05D006355 6.5e-36 155.2 245 47.8
Hma1.2p1_0511F.1_g168910 Hydrangea macrophylla HOM05D005221 ORTHO05D006355 1.4e-35 154.1 225 54.7
FAN17G2349 Fragaria x ananassa HOM05D005221 ORTHO05D006355 3.2e-35 152.9 254 42.1
PGSC0003DMG400031851 Solanum tuberosum HOM05D005221 ORTHO05D006355 5.5e-35 152.1 236 44.5
Nitab4.5_0000321g0080 Nicotiana tabacum HOM05D005221 ORTHO05D006355 3.6e-34 149.4 246 45.5
HanXRQChr04g0110301 Helianthus annuus HOM05D005221 ORTHO05D006355 7.9e-34 148.3 230 52.6
MBI17_g31753_MAGBIO Magnolia biondii HOM05D005221 ORTHO05D006355 1.0e-33 147.9 229 42.8
Sc19g0004310 Simmondsia chinensis HOM05D005221 ORTHO05D006355 2.3e-33 146.7 244 45.5
SGA_v2.0_scaffold10G05107 Striga asiatica HOM05D005221 ORTHO05D006355 3.9e-33 146.0 248 48.8
DCAR_002395 Daucus carota HOM05D005221 ORTHO05D006355 6.7e-33 145.2 246 43.5
Migut.N00171 Erythranthe guttata HOM05D005221 ORTHO05D006355 1.9e-32 143.7 252 41.3
CANSAT78G1299 Cannabis sativa HOM05D005221 ORTHO05D006355 4.3e-32 142.5 270 40.0
Oeu029026.1 Olea europaea HOM05D005221 ORTHO05D006355 1.3e-31 141.0 180 48.3
BcaNung07026 Brassica carinata HOM05D005221 ORTHO05D006355 2.8e-31 139.8 159 52.8
PGR004G1499 Punica granatum HOM05D005221 ORTHO05D006355 6.3e-31 138.7 278 39.9
DCAR_024599 Daucus carota HOM05D005221 ORTHO05D006355 2.4e-30 136.7 234 40.6
Aqoxy5G00503 Aquilegia oxysepala HOM05D005221 ORTHO05D006355 2.6e-29 133.3 203 49.8
Nitab4.5_0007609g0020 Nicotiana tabacum HOM05D005221 ORTHO05D006355 5.0e-28 129.0 155 52.3
Ah.04g154490 Amaranthus hybridus HOM05D005221 ORTHO05D006355 1.4e-25 120.9 208 50.5
Hma1.2p1_0995F.1_g245620 Hydrangea macrophylla HOM05D005221 ORTHO05D006355 1.1e-24 117.9 169 42.6
MSTRG.4014 Avicennia marina HOM05D005221 ORTHO05D006355 2.2e-23 113.6 228 39.0
Lj6P597T84 Lonicera japonica HOM05D005221 ORTHO05D006355 4.8e-23 112.5 184 42.9
Atru.chr4.2515 Acer truncatum HOM05D005221 ORTHO05D006355 5.0e-20 102.4 248 37.5
PSO302G0248 Papaver somniferum HOM05D005221 ORTHO05D006355 1.4e-19 100.9 157 41.4
AUR62038640 Chenopodium quinoa HOM05D005221 ORTHO05D006355 1.1e-16 91.3 162 37.7
SGA_v2.0_scaffold237G43792 Striga asiatica HOM05D005221 ORTHO05D006355 6.3e-15 85.5 158 39.2
Nn5g28878 Nelumbo nucifera HOM05D005221 ORTHO05D006355 2.4e-14 83.6 94 52.1
Nn3g20708 Nelumbo nucifera HOM05D005221 ORTHO05D006355 7.7e-13 78.6 90 52.2
SGA_v2.0_scaffold39G15291 Striga asiatica HOM05D005221 ORTHO05D006355 5.5e-11 72.4 120 39.2
Psat6g208720 Pisum sativum HOM05D005221 ORTHO05D006355 7.2e-11 72.0 44 72.7
arahy.Tifrunner.gnm1.ann1.0RM5BV Arachis hypogaea HOM05D005221 ORTHO05D006355 1.2e-10 71.2 245 38.0
ATR0626G396 Amborella trichopoda HOM05D005221 ORTHO05D006355 2.3e-09 67.0 154 37.0
AUR62038093 Chenopodium quinoa HOM05D005221 ORTHO05D006355 5.2e-09 65.9 155 33.5
CAN.G943.30 Capsicum annuum HOM05D003370 ORTHO05D003848 1.3e-07 61.2 168 33.3
Nn7g37824 Nelumbo nucifera HOM05D003370 ORTHO05D003848 3.7e-07 59.7 163 34.4
Nn7g37825 Nelumbo nucifera HOM05D003370 ORTHO05D003848 3.7e-07 59.7 163 34.4
PSO675G2615 Papaver somniferum HOM05D002458 ORTHO05D002603 6.3e-07 58.9 148 33.1
ATR1098G156 Amborella trichopoda HOM05D003370 ORTHO05D003848 1.4e-06 57.8 166 32.5
MBI18_g28204_MAGBIO Magnolia biondii HOM05D003370 ORTHO05D003848 1.4e-06 57.8 153 33.3
PSO541G0955 Papaver somniferum HOM05D002458 ORTHO05D002603 1.4e-06 57.8 148 31.8
TAR629G0110 Trochodendron aralioides HOM05D003370 ORTHO05D003848 1.4e-06 57.8 162 32.7
Ciclev10020533m.g Citrus clementina HOM05D003370 ORTHO05D003848 1.8e-06 57.4 147 36.1
Solyc02g065020.2 Solanum lycopersicum HOM05D002458 ORTHO05D002603 2.4e-06 57.0 140 35.0
CARHR072730 Cardamine hirsuta HOM05D003370 ORTHO05D003848 3.1e-06 56.6 146 35.6
Haze_08530 Corylus avellana HOM05D003370 ORTHO05D003848 3.1e-06 56.6 162 30.9
RcHm_v2.0_Chr5g0026971 Rosa chinensis HOM05D003370 ORTHO05D003848 4.1e-06 56.2 150 34.0
BraSC56t46389Z Brassica rapa HOM05D003370 ORTHO05D003848 5.3e-06 55.8 112 37.5
Nitab4.5_0000728g0040 Nicotiana tabacum HOM05D002458 ORTHO05D002603 9.1e-06 55.1 142 34.5


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