Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G16710 Arabidopsis lyrata HOM05D003663 ORTHO05D010021 2.4e-49 198.7 116 100.0
CARHR080410 Cardamine hirsuta HOM05D003663 ORTHO05D010021 2.6e-40 168.7 116 75.9
Thhalv10021806m.g Eutrema salsugineum HOM05D003663 ORTHO05D010021 3.4e-40 168.3 116 75.9
Carub.0003s0532 Capsella rubella HOM05D003663 ORTHO05D010021 4.5e-40 167.9 116 83.6
Sp3g04840 Schrenkiella parvula HOM05D003663 ORTHO05D010021 4.5e-40 167.9 116 73.3
BcaB04g19233 Brassica carinata HOM05D003663 ORTHO05D010021 3.2e-38 161.8 114 73.7
BraA03t12614Z Brassica rapa HOM05D003663 ORTHO05D010021 2.7e-37 158.7 114 71.9
A03p34380 Brassica napus HOM05D003663 ORTHO05D010021 1.8e-36 156.0 114 71.1
BcaB04g19228 Brassica carinata HOM05D003663 ORTHO05D010021 6.7e-36 154.1 114 71.1
BcaC01g04309 Brassica carinata HOM05D003663 ORTHO05D010021 6.7e-36 154.1 114 71.1
C03p41850 Brassica napus HOM05D003663 ORTHO05D010021 6.7e-36 154.1 114 71.1
BolC3t16468H Brassica oleracea HOM05D003663 ORTHO05D010021 6.7e-36 154.1 114 71.1
AT3G05936 Arabidopsis thaliana HOM05D003663 ORTHO05D010021 5.2e-28 127.9 91 75.8
Aa31LG5G16360 Aethionema arabicum HOM05D003663 ORTHO05D010021 3.7e-26 121.7 114 60.5
CARHR186970 Cardamine hirsuta HOM05D003663 ORTHO05D010021 1.6e-24 116.3 111 54.1
Sp2g21380 Schrenkiella parvula HOM05D003663 ORTHO05D010021 1.7e-23 112.8 111 54.1
Thhalv10005177m.g Eutrema salsugineum HOM05D003663 ORTHO05D010021 3.6e-21 105.1 111 50.5
BcaNung02824 Brassica carinata HOM05D003663 ORTHO05D010021 4.7e-21 104.8 111 49.5
Carub.0006s2421 Capsella rubella HOM05D003663 ORTHO05D010021 4.7e-21 104.8 106 52.8
A02p39370 Brassica napus HOM05D003663 ORTHO05D010021 1.4e-20 103.2 111 51.4
BcaC04g23625 Brassica carinata HOM05D003663 ORTHO05D010021 1.3e-18 96.7 111 48.6
BolC2t11965H Brassica oleracea HOM05D003663 ORTHO05D010021 1.7e-18 96.3 111 48.6
C02p59100 Brassica napus HOM05D003663 ORTHO05D010021 2.7e-16 89.0 63 66.7
THA.LOC104803108 Tarenaya hassleriana HOM05D003663 ORTHO05D010021 1.1e-14 83.6 113 47.8
A06p36830 Brassica napus HOM05D003663 ORTHO05D005327 2.1e-13 79.3 105 45.7
C07p41660 Brassica napus HOM05D003663 ORTHO05D005327 2.1e-13 79.3 105 45.7
BolC7t44701H Brassica oleracea HOM05D003663 ORTHO05D005327 2.1e-13 79.3 105 45.7
BraA06t26609Z Brassica rapa HOM05D003663 ORTHO05D005327 2.1e-13 79.3 105 45.7
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 1.0e-12 77.0 90 50.0
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 5.2e-12 74.7 90 51.1
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 8.8e-12 73.9 90 51.1
BolC9t53556H Brassica oleracea HOM05D003663 ORTHO05D005327 2.6e-11 72.4 90 48.9
C09p06370 Brassica napus HOM05D003663 ORTHO05D005327 7.5e-11 70.9 90 47.8
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 3.7e-10 68.6 91 47.3
FAN14G1748 Fragaria x ananassa HOM05D008494 ORTHO05D010021 1.2e-08 63.5 65 47.7
RcHm_v2.0_Chr3g0459041 Rosa chinensis HOM05D008494 ORTHO05D010021 2.0e-08 62.8 71 42.3
Manes.09G182700 Manihot esculenta HOM05D008494 ORTHO05D010021 1.7e-07 59.7 107 36.4
QL03p011411 Quercus lobata HOM05D008494 ORTHO05D010021 2.9e-07 58.9 100 37.0
Manes.08G105911 Manihot esculenta HOM05D008494 ORTHO05D010021 2.5e-06 55.8 97 37.1
Glyma.03G227000 Glycine max HOM05D008494 ORTHO05D010021 3.3e-06 55.5 59 45.8
VMungo1383G1264 Vigna mungo HOM05D008494 ORTHO05D010021 4.2e-06 55.1 58 41.4
Prupe.6G302200 Prunus persica HOM05D008494 ORTHO05D010021 7.2e-06 54.3 66 43.9
MD04G1183700 Malus domestica HOM05D008494 ORTHO05D010021 9.5e-06 53.9 68 42.6


User provided reference genes

Program Settings