Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G16430 Arabidopsis lyrata HOM05D011267 ORTHO05D013190 5.2e-43 177.2 81 100.0
AT3G05727 Arabidopsis thaliana HOM05D011267 ORTHO05D013190 2.4e-40 168.3 81 93.8
BolC1t05675H Brassica oleracea HOM05D011267 ORTHO05D013190 7.8e-31 136.7 79 77.2
BraA01t04490Z Brassica rapa HOM05D011267 ORTHO05D013190 8.6e-30 133.3 79 75.9
CARHR080190 Cardamine hirsuta HOM05D011267 ORTHO05D013190 1.8e-24 115.5 79 69.6
AT3G05730 Arabidopsis thaliana HOM05D011267 ORTHO05D013190 1.7e-22 109.0 85 61.2
BraA05t22946Z Brassica rapa HOM05D011267 ORTHO05D013190 1.2e-20 102.8 90 60.0
BcaC05g29784 Brassica carinata HOM05D011267 ORTHO05D013190 2.8e-20 101.7 90 58.9
Carub.0003s0509 Capsella rubella HOM05D011267 ORTHO05D013190 4.7e-20 100.9 85 64.7
BcaC09g47845 Brassica carinata HOM05D011267 ORTHO05D013190 8.9e-19 96.7 90 57.8
BolC1t05673H Brassica oleracea HOM05D011267 ORTHO05D013190 8.9e-19 96.7 90 57.8
BraA01t04491Z Brassica rapa HOM05D011267 ORTHO05D013190 9.8e-18 93.2 90 54.4
CARHR080200 Cardamine hirsuta HOM05D011267 ORTHO05D013190 1.1e-16 89.7 91 53.8
BolC5t34808H Brassica oleracea HOM05D011267 ORTHO05D013190 3.2e-16 88.2 81 56.8
Carub.0003s0510 Capsella rubella HOM05D011267 ORTHO05D013190 2.0e-15 85.5 66 66.7
AL6G45810 Arabidopsis lyrata HOM05D025523 ORTHO05D023653 8.1e-12 73.6 76 46.1
AT4G11393 Arabidopsis thaliana HOM05D025523 ORTHO05D023653 2.3e-11 72.0 76 44.7
CARHR179090 Cardamine hirsuta HOM05D025523 ORTHO05D023653 4.0e-11 71.2 77 46.8
CARHR131460 Cardamine hirsuta HOM05D025523 ORTHO05D023653 5.2e-11 70.9 77 48.1
AL4G15700 Arabidopsis lyrata HOM05D007338 ORTHO05D013190 6.8e-11 70.5 78 44.9
AL4G15710 Arabidopsis lyrata HOM05D025523 ORTHO05D023653 1.2e-10 69.7 76 43.4
AT1G34047 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 2.3e-06 55.5 82 40.2


User provided reference genes

Program Settings