Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G16120 Arabidopsis lyrata HOM05D005736 ORTHO05D007215 1.3e-193 679.5 337 100.0
AT3G05520 Arabidopsis thaliana HOM05D005736 ORTHO05D007215 6.5e-172 607.4 308 97.1
Carub.0003s0481 Capsella rubella HOM05D005736 ORTHO05D007215 6.5e-172 607.4 310 96.8
Sp3g04350 Schrenkiella parvula HOM05D005736 ORTHO05D007215 2.5e-171 605.5 309 95.8
CARHR079910 Cardamine hirsuta HOM05D005736 ORTHO05D007215 7.9e-170 600.5 308 95.5
Aa31LG5G15870 Aethionema arabicum HOM05D005736 ORTHO05D007215 1.1e-168 596.7 309 92.9
BraA03t12591Z Brassica rapa HOM05D005736 ORTHO05D007215 3.3e-168 595.1 336 88.4
BolC3t16437H Brassica oleracea HOM05D005736 ORTHO05D007215 1.3e-167 593.2 336 87.8
Thhalv10021069m.g Eutrema salsugineum HOM05D005736 ORTHO05D007215 1.3e-167 593.2 344 86.6
BNapus_Darmor_BZH_scaffold_114p00020 Brassica napus HOM05D005736 ORTHO05D007215 1.1e-166 590.1 307 93.8
BraSC132t45500Z Brassica rapa HOM05D005736 ORTHO05D007215 4.0e-166 588.2 307 93.5
BcaB04g19260 Brassica carinata HOM05D005736 ORTHO05D007215 2.2e-164 582.4 309 92.2
BcaB04g19261 Brassica carinata HOM05D005736 ORTHO05D007215 3.8e-164 581.6 309 91.9
A03p34170 Brassica napus HOM05D005736 ORTHO05D007215 4.2e-163 578.2 307 91.9
C03p41560 Brassica napus HOM05D005736 ORTHO05D007215 6.1e-162 574.3 307 91.2
BolC1t05691H Brassica oleracea HOM05D005736 ORTHO05D007215 3.1e-158 562.0 314 88.9
THA.LOC104818718 Tarenaya hassleriana HOM05D005736 ORTHO05D007215 2.0e-157 559.3 308 84.4
Thecc.05G313100 Theobroma cacao HOM05D005736 ORTHO05D007215 5.5e-139 498.0 319 74.3
Duzib106G0969 Durio zibethinus HOM05D005736 ORTHO05D007215 1.2e-138 496.9 300 76.3
COL.COLO4_10521 Corchorus olitorius HOM05D005736 ORTHO05D007215 1.1e-136 490.3 300 77.0
Haze_04138 Corylus avellana HOM05D005736 ORTHO05D007215 3.3e-136 488.8 309 73.5
CiPaw.07G021500 Carya illinoinensis HOM05D005736 ORTHO05D007215 1.7e-135 486.5 312 73.1
PGR031G0613 Punica granatum HOM05D005736 ORTHO05D007215 2.2e-135 486.1 310 74.5
Atru.chr2.31 Acer truncatum HOM05D005736 ORTHO05D007215 2.8e-135 485.7 300 76.0
Ciclev10001982m.g Citrus clementina HOM05D005736 ORTHO05D007215 2.8e-135 485.7 300 75.3
TWI36G0679 Tripterygium wilfordii HOM05D005736 ORTHO05D007215 2.8e-135 485.7 300 75.0
GSVIVG01031141001 Vitis vinifera HOM05D005736 ORTHO05D007215 3.7e-135 485.3 297 73.7
Hma1.2p1_1292F.1_g273760 Hydrangea macrophylla HOM05D005736 ORTHO05D007215 6.3e-135 484.6 305 72.8
TAR633G1366 Trochodendron aralioides HOM05D005736 ORTHO05D007215 8.2e-135 484.2 309 73.1
Gorai.007G300100 Gossypium raimondii HOM05D005736 ORTHO05D007215 7.0e-134 481.1 300 75.0
Hund07098 Selenicereus undatus HOM05D005736 ORTHO05D007215 9.1e-134 480.7 309 74.1
CANSAT54G0716 Cannabis sativa HOM05D005736 ORTHO05D007215 1.2e-133 480.3 309 72.8
Gohir.D11G277900 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.6e-133 479.9 300 75.0
CSS0016231 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 4.5e-133 478.4 306 70.9
Medtr7g112700 Medicago truncatula HOM05D005736 ORTHO05D007215 5.9e-133 478.0 309 71.8
QL03p020205 Quercus lobata HOM05D005736 ORTHO05D007215 7.7e-133 477.6 302 72.5
CSS0007199 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 1.3e-132 476.9 306 70.9
Potri.013G017000 Populus trichocarpa HOM05D005736 ORTHO05D007215 1.7e-132 476.5 309 71.8
Sc09g0002940 Simmondsia chinensis HOM05D005736 ORTHO05D007215 2.2e-132 476.1 309 72.5
MD12G1212900 Malus domestica HOM05D005736 ORTHO05D007215 2.9e-132 475.7 309 72.2
Peaxi162Scf00037g01216 Petunia axillaris HOM05D005736 ORTHO05D007215 2.9e-132 475.7 306 71.9
Potri.005G025300 Populus trichocarpa HOM05D005736 ORTHO05D007215 5.0e-132 474.9 309 70.9
Nitab4.5_0003844g0030 Nicotiana tabacum HOM05D005736 ORTHO05D007215 6.5e-132 474.6 310 70.6
Gohir.A11G268000 Gossypium hirsutum HOM05D005736 ORTHO05D007215 8.5e-132 474.2 300 74.0
CsaV3_2G006740 Cucumis sativus L. HOM05D005736 ORTHO05D007215 7.2e-131 471.1 309 70.9
Manes.09G170200 Manihot esculenta HOM05D005736 ORTHO05D007215 9.4e-131 470.7 305 71.8
Prupe.6G320500 Prunus persica HOM05D005736 ORTHO05D007215 1.6e-130 469.9 309 71.8
CAN.G1459.12 Capsicum annuum HOM05D005736 ORTHO05D007215 2.7e-130 469.2 312 68.9
Sabra13G0020000 Salix brachista HOM05D005736 ORTHO05D007215 4.7e-130 468.4 309 70.9
PGSC0003DMG400024712 Solanum tuberosum HOM05D005736 ORTHO05D007215 4.7e-130 468.4 310 69.4
Sabra13G0015800 Salix brachista HOM05D005736 ORTHO05D007215 6.1e-130 468.0 309 70.9
Cfa006630 Carpinus fangiana HOM05D005736 ORTHO05D007215 1.0e-129 467.2 309 71.2
Lsat_1_v5_gn_7_69261 Lactuca sativa HOM05D005736 ORTHO05D007215 1.0e-129 467.2 309 70.2
arahy.Tifrunner.gnm1.ann1.7HV2PX Arachis hypogaea HOM05D005736 ORTHO05D007215 1.4e-129 466.8 306 70.6
ClCG02G015270 Citrullus lanatus HOM05D005736 ORTHO05D007215 1.4e-129 466.8 309 70.6
Cc02_g34150 Coffea canephora HOM05D005736 ORTHO05D007215 2.3e-129 466.1 307 70.0
Oeu043344.1 Olea europaea HOM05D005736 ORTHO05D007215 2.3e-129 466.1 306 70.3
Sed0015517 Sechium edule HOM05D005736 ORTHO05D007215 2.3e-129 466.1 308 70.5
EL10Ac4g09914 Beta vulgaris HOM05D005736 ORTHO05D007215 3.0e-129 465.7 310 71.0
Lalb_Chr15g0077351 Lupinus albus HOM05D005736 ORTHO05D007215 3.0e-129 465.7 310 70.0
RcHm_v2.0_Chr3g0455751 Rosa chinensis HOM05D005736 ORTHO05D007215 4.0e-129 465.3 309 71.8
Sopen01g043240 Solanum pennellii HOM05D005736 ORTHO05D007215 8.8e-129 464.2 310 69.0
Gohir.A11G294600 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.2e-128 463.8 309 70.6
MD04G1200300 Malus domestica HOM05D005736 ORTHO05D007215 1.2e-128 463.8 311 71.1
DCAR_003356 Daucus carota HOM05D005736 ORTHO05D007215 1.5e-128 463.4 309 68.3
Solyc09g065950.3 Solanum lycopersicum HOM05D005736 ORTHO05D007215 2.6e-128 462.6 310 68.7
arahy.Tifrunner.gnm1.ann1.B5Q7D5 Arachis hypogaea HOM05D005736 ORTHO05D007215 3.4e-128 462.2 307 70.4
TPR.G33191 Trifolium pratense HOM05D005736 ORTHO05D007215 1.3e-127 460.3 308 69.5
Ah.06g189800 Amaranthus hybridus HOM05D005736 ORTHO05D007215 1.7e-127 459.9 305 71.1
Glyma.19G233300 Glycine max HOM05D005736 ORTHO05D007215 2.2e-127 459.5 309 69.6
Nn3g21454 Nelumbo nucifera HOM05D005736 ORTHO05D007215 2.8e-127 459.1 309 69.3
AUR62005207 Chenopodium quinoa HOM05D005736 ORTHO05D007215 3.7e-127 458.8 309 69.3
Lj1g0012360 Lotus japonicus HOM05D005736 ORTHO05D007215 6.3e-127 458.0 318 66.4
SGA_v2.0_scaffold196G40952 Striga asiatica HOM05D005736 ORTHO05D007215 8.3e-127 457.6 306 69.3
Glyma.03G235500 Glycine max HOM05D005736 ORTHO05D007215 1.1e-126 457.2 309 68.3
FvH4_6g06571 Fragaria vesca HOM05D005736 ORTHO05D007215 5.4e-126 454.9 309 70.2
Phvul.006G089500 Phaseolus vulgaris HOM05D005736 ORTHO05D007215 9.1e-126 454.1 309 67.6
TAR362G0909 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.2e-125 453.8 305 69.5
Aqoxy5G00736 Aquilegia oxysepala HOM05D005736 ORTHO05D007215 2.0e-125 453.0 313 66.8
HanXRQChr16g0513361 Helianthus annuus HOM05D005736 ORTHO05D007215 3.5e-125 452.2 309 68.9
PSO210G0197 Papaver somniferum HOM05D005736 ORTHO05D007215 3.5e-125 452.2 306 67.0
HanXRQChr10g0296691 Helianthus annuus HOM05D005736 ORTHO05D007215 5.9e-125 451.4 305 70.5
PSO832G2303 Papaver somniferum HOM05D005736 ORTHO05D007215 5.9e-125 451.4 306 67.0
ATR0796G081 Amborella trichopoda HOM05D005736 ORTHO05D007215 8.5e-124 447.6 309 66.0
Gorai.007G341300 Gossypium raimondii HOM05D005736 ORTHO05D007215 1.5e-123 446.8 333 65.5
Rhsim07G0188500 Rhododendron simsii HOM05D002832 ORTHO05D008667 1.5e-123 446.8 383 56.9
ECA234G1428 Erigeron canadensis HOM05D005736 ORTHO05D007215 1.9e-123 446.4 298 67.8
Migut.O00559 Erythranthe guttata HOM05D005736 ORTHO05D007215 3.2e-123 445.7 306 67.3
Migut.N02084 Erythranthe guttata HOM05D005736 ORTHO05D007215 3.6e-122 442.2 306 67.0
VMungo0540G0827 Vigna mungo HOM05D005736 ORTHO05D007215 8.0e-122 441.0 309 65.4
HPP92_002147 Vanilla planifolia HOM05D005736 ORTHO05D007215 4.0e-121 438.7 309 64.4
CDE02G3291 Ceratophyllum demersum HOM05D005736 ORTHO05D007215 5.2e-121 438.3 305 67.2
FAN05G2751 Fragaria x ananassa HOM05D001134 ORTHO05D007215 2.0e-120 436.4 308 68.8
MSTRG.20415 Avicennia marina HOM05D005736 ORTHO05D007215 3.4e-120 435.6 306 66.7
FAN09G2204 Fragaria x ananassa HOM05D001134 ORTHO05D007215 3.4e-120 435.6 308 68.8
vmacro04813 Vaccinium macrocarpon HOM05D005736 ORTHO05D007215 3.4e-120 435.6 381 57.2
FAN02G0934 Fragaria x ananassa HOM05D005736 ORTHO05D007215 8.3e-119 431.0 345 62.3
Dinv30811 Davidia involucrata HOM05D005736 ORTHO05D007215 1.2e-117 427.2 305 67.5
Cpa.g.sc48.100 Carica papaya HOM05D005736 ORTHO05D007215 5.9e-117 424.9 309 67.3
FAN14G1274 Fragaria x ananassa HOM05D001134 ORTHO05D001035 1.1e-115 420.6 318 65.7
Zm00001eb330450 Zea mays HOM05D005736 ORTHO05D007215 1.9e-115 419.9 297 65.7
MELO3C004216.2 Cucumis melo HOM05D005736 ORTHO05D007215 2.5e-115 419.5 309 65.0
Zm00001eb111300 Zea mays HOM05D005736 ORTHO05D007215 9.8e-112 407.5 297 64.3
Eucgr.H04534 Eucalyptus grandis HOM05D005736 ORTHO05D007215 9.2e-110 401.0 274 67.2
BcaC09g47830 Brassica carinata HOM05D005736 ORTHO05D007215 1.7e-108 396.7 210 91.9
Psat3g011440 Pisum sativum HOM05D005736 ORTHO05D007215 1.8e-105 386.7 262 68.3
AUR62000762 Chenopodium quinoa HOM05D005736 ORTHO05D007215 8.9e-105 384.4 262 68.3
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 1.7e-103 380.2 265 65.7
Gohir.D11G309300 Gossypium hirsutum HOM05D005736 ORTHO05D007215 4.7e-98 362.1 238 69.7
Mapoly0002s0253 Marchantia polymorpha HOM05D005736 ORTHO05D007215 6.0e-93 345.1 302 52.3
unitig_46.g18363 Utricularia gibba HOM05D005736 ORTHO05D007215 1.9e-91 340.1 301 55.1
SMO196G0013 Selaginella moellendorffii HOM05D005736 ORTHO05D007215 3.4e-88 329.3 289 55.0
Actinidia35560 Actinidia chinensis HOM05D002832 ORTHO05D008667 1.9e-86 323.6 263 61.6
AagrBONN_evm.TU.Sc2ySwM_344.5036 Anthoceros agrestis HOM05D005736 ORTHO05D007215 9.2e-86 321.2 306 51.3
RcHm_v2.0_Chr1g0327431 Rosa chinensis HOM05D005736 ORTHO05D007215 1.2e-85 320.9 201 74.6
Os07g0414800 Oryza sativa ssp. japonica HOM05D005736 ORTHO05D007215 6.0e-85 318.5 216 67.1
unitig_48.g30289 Utricularia gibba HOM05D005736 ORTHO05D007215 5.6e-83 312.0 303 52.1
Nitab4.5_0018629g0010 Nicotiana tabacum HOM05D005736 ORTHO05D007215 8.7e-76 288.1 177 72.3
Sopen09g027740 Solanum pennellii HOM05D005736 ORTHO05D007215 1.1e-73 281.2 177 70.6
BcaB05g23235 Brassica carinata HOM05D005736 ORTHO05D007215 1.7e-68 263.8 170 78.2
Pp3c10_25170 Physcomitrium patens HOM05D005736 ORTHO05D007215 4.8e-66 255.8 237 48.5
BcaB04g21446 Brassica carinata HOM05D005736 ORTHO05D007215 7.6e-64 248.4 130 94.6
RcHm_v2.0_Chr1g0322221 Rosa chinensis HOM05D005736 ORTHO05D007215 2.7e-61 240.0 181 66.3
Lj5A420T26 Lonicera japonica HOM05D005736 ORTHO05D007215 1.3e-60 237.7 178 63.5
RcHm_v2.0_Chr3g0465741 Rosa chinensis HOM05D005736 ORTHO05D007215 1.2e-56 224.6 142 72.5
Pp3c20_23130 Physcomitrium patens HOM05D005736 ORTHO05D007215 9.6e-51 204.9 188 51.6
Actinidia16813 Actinidia chinensis HOM05D005736 ORTHO05D007215 5.9e-48 195.7 127 71.7
MBI18_g08112_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 1.1e-43 181.4 130 62.3
RcHm_v2.0_Chr1g0322051 Rosa chinensis HOM05D005736 ORTHO05D007215 2.4e-41 173.7 130 64.6
Actinidia16814 Actinidia chinensis HOM05D005736 ORTHO05D007215 3.4e-40 169.9 107 72.9
Nitab4.5_0003658g0100 Nicotiana tabacum HOM05D001134 ORTHO05D001035 1.4e-36 157.9 109 68.8
MBI18_g44147_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 9.7e-35 151.8 145 51.0
TAR636G3309 Trochodendron aralioides HOM05D005736 ORTHO05D007215 6.3e-34 149.1 109 65.1
TAR629G2822 Trochodendron aralioides HOM05D005736 ORTHO05D007215 4.1e-33 146.4 109 66.1
RcHm_v2.0_Chr1g0322151 Rosa chinensis HOM05D005736 ORTHO05D007215 2.2e-31 140.6 112 60.7
unitig_48.g30291 Utricularia gibba HOM05D003281 ORTHO05D004128 1.7e-18 97.8 74 58.1
MBI18_g08111_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 1.9e-14 84.3 52 67.3
BcaB01g01688 Brassica carinata HOM05D006432 ORTHO05D008257 3.5e-08 63.5 27 100.0


User provided reference genes

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