Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G16010 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 2.3e-252 875.2 474 100.0
AT3G05450 Arabidopsis thaliana HOM05D004201 ORTHO05D011677 1.2e-99 367.9 477 52.8
AL8G28550 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 2.1e-88 330.5 238 75.6
AL6G37010 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 6.2e-88 328.9 238 75.2
BolC5t34836H Brassica oleracea HOM05D004201 ORTHO05D011677 6.7e-82 308.9 454 45.2
AL3G16040 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 4.5e-78 296.2 191 78.5
AL1G56010 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 1.9e-76 290.8 238 68.9
CARHR080560 Cardamine hirsuta HOM05D004201 ORTHO05D011677 7.2e-60 235.7 240 60.4
Thhalv10021511m.g Eutrema salsugineum HOM05D004201 ORTHO05D011677 1.0e-58 231.9 215 59.1
AL304U10030 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 6.7e-58 229.2 266 54.9
BcaC05g30121 Brassica carinata HOM05D004201 ORTHO05D011677 2.6e-57 227.3 208 58.2
BcaC05g30167 Brassica carinata HOM05D004201 ORTHO05D011677 4.4e-57 226.5 242 52.5
Aa31LG1G23790 Aethionema arabicum HOM05D004201 ORTHO05D011677 1.4e-55 221.5 395 37.7
C05p61800 Brassica napus HOM05D004201 ORTHO05D011677 1.2e-51 208.4 204 54.4
BraA05t19067Z Brassica rapa HOM05D004201 ORTHO05D011677 1.0e-45 188.7 208 51.9
Aa31LG1G23540 Aethionema arabicum HOM05D004201 ORTHO05D011677 5.0e-45 186.4 386 36.8
CARHR079840 Cardamine hirsuta HOM05D004201 ORTHO05D011677 1.6e-43 181.4 238 49.6
Aa31LG1G23670 Aethionema arabicum HOM05D004201 ORTHO05D011677 9.7e-41 172.2 218 46.8
CARHR079820 Cardamine hirsuta HOM05D004201 ORTHO05D011677 4.7e-35 153.3 90 80.0
CARHR079790 Cardamine hirsuta HOM05D004201 ORTHO05D011677 2.0e-33 147.9 86 80.2
BolC3t13445H Brassica oleracea HOM05D004201 ORTHO05D009648 6.3e-32 142.9 413 32.4
AL3G16060 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 9.1e-31 139.0 139 49.6
BcaB02g06909 Brassica carinata HOM05D004201 ORTHO05D012052 9.1e-31 139.0 459 31.8
Aa31LG1G23530 Aethionema arabicum HOM05D004201 ORTHO05D011677 1.1e-28 132.1 222 45.0
AL3G16360 Arabidopsis lyrata HOM05D004201 ORTHO05D031360 3.6e-27 127.1 154 46.8
Aa31LG11G12620 Aethionema arabicum HOM05D004201 ORTHO05D009648 2.3e-26 124.4 487 29.4
Carub.0006s3349 Capsella rubella HOM05D004201 ORTHO05D009648 2.3e-26 124.4 167 45.5
Carub.0006s3347 Capsella rubella HOM05D004201 ORTHO05D009648 3.0e-26 124.0 199 41.7
Aa31LG1G23660 Aethionema arabicum HOM05D004201 ORTHO05D011677 8.9e-26 122.5 217 37.8
Aa31LG1G23650 Aethionema arabicum HOM05D004201 ORTHO05D011677 2.0e-25 121.3 222 37.4
AL3G16370 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 4.9e-24 116.7 221 35.3
BcaC05g30039 Brassica carinata HOM05D014826 ORTHO05D014863 1.2e-22 112.1 444 27.9
Carub.0003s0473 Capsella rubella HOM05D004201 ORTHO05D011677 1.6e-22 111.7 118 60.2
BcaB08g36118 Brassica carinata HOM05D004201 ORTHO05D009648 4.5e-22 110.2 219 36.5
A05p41720 Brassica napus HOM05D014826 ORTHO05D014863 5.9e-22 109.8 455 27.7
Thhalv10029282m.g Eutrema salsugineum HOM05D012310 ORTHO05D012594 5.0e-21 106.7 156 41.7
C03p09490 Brassica napus HOM05D004201 ORTHO05D009648 6.6e-21 106.3 158 44.3
BcaB01g05219 Brassica carinata HOM05D004201 ORTHO05D009648 1.5e-20 105.1 158 43.7
BraA05t22891Z Brassica rapa HOM05D014826 ORTHO05D014863 1.5e-20 105.1 455 27.3
BcaB01g05228 Brassica carinata HOM05D004201 ORTHO05D009648 4.3e-20 103.6 160 41.9
BraA03t10141Z Brassica rapa HOM05D004201 ORTHO05D009648 5.6e-20 103.2 160 43.1
AT4G03565 Arabidopsis thaliana HOM05D012310 ORTHO05D012594 9.5e-20 102.4 162 40.7
A03p08140 Brassica napus HOM05D004201 ORTHO05D009648 1.6e-19 101.7 159 42.8
A03p08180 Brassica napus HOM05D004201 ORTHO05D009648 2.1e-19 101.3 158 41.8
A10p02260 Brassica napus HOM05D004201 ORTHO05D012052 2.1e-19 101.3 209 37.3
BraA10t42492Z Brassica rapa HOM05D004201 ORTHO05D012052 2.1e-19 101.3 209 37.3
BcaB01g04954 Brassica carinata HOM05D004201 ORTHO05D009648 2.8e-19 100.9 215 36.3
BcaB01g04958 Brassica carinata HOM05D004201 ORTHO05D009648 3.6e-19 100.5 161 42.9
AL3G17200 Arabidopsis lyrata HOM05D004201 ORTHO05D014863 4.7e-19 100.1 376 30.1
C03p09410 Brassica napus HOM05D004201 ORTHO05D009648 4.7e-19 100.1 158 42.4
BolC3t13435H Brassica oleracea HOM05D004201 ORTHO05D009648 4.7e-19 100.1 158 42.4
A03p08190 Brassica napus HOM05D004201 ORTHO05D009648 8.0e-19 99.4 229 36.2
AL1G13240 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 1.0e-18 99.0 210 36.7
BcaB01g05230 Brassica carinata HOM05D004201 ORTHO05D009648 1.4e-18 98.6 158 41.8
A03p08170 Brassica napus HOM05D004201 ORTHO05D009648 1.4e-18 98.6 161 41.0
AL1G13250 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 3.1e-18 97.4 205 36.6
THA.LOC104809407 Tarenaya hassleriana HOM05D004201 ORTHO05D012052 3.1e-18 97.4 220 32.7
A03p08200 Brassica napus HOM05D004201 ORTHO05D009648 4.0e-18 97.1 161 39.8
Carub.0006s1527 Capsella rubella HOM05D004201 ORTHO05D009648 5.2e-18 96.7 160 38.8
BcaB01g05220 Brassica carinata HOM05D004201 ORTHO05D009648 6.8e-18 96.3 160 41.9
BcaB01g05223 Brassica carinata HOM05D004201 ORTHO05D009648 6.8e-18 96.3 160 41.9
CARHR196090 Cardamine hirsuta HOM05D004201 ORTHO05D009648 6.8e-18 96.3 159 40.3
BcaB01g04953 Brassica carinata HOM05D004201 ORTHO05D009648 8.9e-18 95.9 160 41.9
BcaB01g04951 Brassica carinata HOM05D004201 ORTHO05D009648 1.5e-17 95.1 223 35.4
Carub.0006s1532 Capsella rubella HOM05D004201 ORTHO05D009648 1.5e-17 95.1 214 34.1
AL6G49270 Arabidopsis lyrata HOM05D012310 ORTHO05D012594 2.6e-17 94.4 163 39.3
Carub.0006s1529 Capsella rubella HOM05D004201 ORTHO05D009648 2.6e-17 94.4 219 33.3
BcaB01g05222 Brassica carinata HOM05D004201 ORTHO05D009648 4.4e-17 93.6 226 35.0
BcaB01g05226 Brassica carinata HOM05D004201 ORTHO05D009648 4.4e-17 93.6 226 35.0
Carub.0006s1528 Capsella rubella HOM05D004201 ORTHO05D009648 4.4e-17 93.6 160 36.9
THA.LOC104809406 Tarenaya hassleriana HOM05D004201 ORTHO05D012052 9.8e-17 92.4 221 34.4
BcaB01g05224 Brassica carinata HOM05D004201 ORTHO05D009648 1.3e-16 92.0 214 36.0
CARHR252000 Cardamine hirsuta HOM05D012310 ORTHO05D012594 1.7e-16 91.7 162 38.9
THA.LOC104801126 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 1.7e-16 91.7 216 33.3
A10p02210 Brassica napus HOM05D004201 ORTHO05D012052 2.9e-16 90.9 215 34.0
C05p02080 Brassica napus HOM05D004201 ORTHO05D012052 2.9e-16 90.9 157 39.5
BolC5t28985H Brassica oleracea HOM05D004201 ORTHO05D012052 2.9e-16 90.9 157 39.5
AL6G49220 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 4.9e-16 90.1 225 35.1
BraA03t10139Z Brassica rapa HOM05D004201 ORTHO05D009648 4.9e-16 90.1 464 26.7
BraA10t42489Z Brassica rapa HOM05D004201 ORTHO05D012052 4.9e-16 90.1 208 34.6
Sp6g27080 Schrenkiella parvula HOM05D004201 ORTHO05D009648 4.9e-16 90.1 184 37.0
BraA01t04445Z Brassica rapa HOM05D014826 ORTHO05D014863 6.4e-16 89.7 239 32.6
BraA09t35929Z Brassica rapa HOM05D004201 ORTHO05D009648 8.3e-16 89.4 165 40.0
AT5G17150 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 1.9e-15 88.2 159 38.4
BcaB01g04955 Brassica carinata HOM05D004201 ORTHO05D009648 1.9e-15 88.2 158 40.5
AT1G03710 Arabidopsis thaliana HOM05D004201 ORTHO05D012052 2.4e-15 87.8 208 33.2
A03p20510 Brassica napus HOM05D004201 ORTHO05D009648 3.2e-15 87.4 231 34.2
AL3G17220 Arabidopsis lyrata HOM05D004201 ORTHO05D014863 4.1e-15 87.0 386 27.5
BcaC01g06645 Brassica carinata HOM05D004201 ORTHO05D009648 4.1e-15 87.0 227 33.9
THA.LOC104801127 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 4.1e-15 87.0 225 32.4
C03p09500 Brassica napus HOM05D004201 ORTHO05D009648 5.4e-15 86.7 165 36.4
THA.LOC104801128 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 7.0e-15 86.3 216 32.4
BcaB01g05225 Brassica carinata HOM05D004201 ORTHO05D009648 1.2e-14 85.5 227 34.4
BcaB01g05229 Brassica carinata HOM05D004201 ORTHO05D009648 1.2e-14 85.5 155 36.1
AT5G17090 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 2.7e-14 84.3 160 35.6
Aa31LG11G12560 Aethionema arabicum HOM05D004201 ORTHO05D009648 3.5e-14 84.0 204 30.9
BcaB01g02543 Brassica carinata HOM05D012310 ORTHO05D012594 4.6e-14 83.6 167 35.9
C03p09420 Brassica napus HOM05D004201 ORTHO05D009648 4.6e-14 83.6 155 35.5
BcaB01g05221 Brassica carinata HOM05D004201 ORTHO05D009648 6.0e-14 83.2 157 39.5
BNapus_Darmor_BZH_scaffold_118p00220 Brassica napus HOM05D014826 ORTHO05D014863 1.0e-13 82.4 260 32.3
A03p08160 Brassica napus HOM05D004201 ORTHO05D009648 1.3e-13 82.0 155 35.5
Thhalv10008370m.g Eutrema salsugineum HOM05D004201 ORTHO05D012052 1.3e-13 82.0 193 32.6
Carub.0006s3348 Capsella rubella HOM05D004201 ORTHO05D009648 1.7e-13 81.6 164 34.1
THA.LOC104801148 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 2.3e-13 81.3 156 35.9
AL1G13200 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 3.9e-13 80.5 176 35.2
AL6G28110 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 5.0e-13 80.1 212 31.1
AT5G17110 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 5.0e-13 80.1 159 35.8
AT5G17120 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 5.0e-13 80.1 210 32.4
Carub.0006s3350 Capsella rubella HOM05D012310 ORTHO05D012594 6.6e-13 79.7 218 33.5
C09p60060 Brassica napus HOM05D004201 ORTHO05D009648 1.1e-12 79.0 164 38.4
BolC9t58841H Brassica oleracea HOM05D004201 ORTHO05D009648 1.1e-12 79.0 164 38.4
AT5G17100 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 2.5e-12 77.8 219 30.6
BcaB01g04956 Brassica carinata HOM05D004201 ORTHO05D009648 2.5e-12 77.8 157 36.9
C05p60930 Brassica napus HOM05D014826 ORTHO05D014863 2.5e-12 77.8 290 27.9
C09p02940 Brassica napus HOM05D004201 ORTHO05D009648 2.5e-12 77.8 200 35.5
BolC5t34749H Brassica oleracea HOM05D014826 ORTHO05D014863 2.5e-12 77.8 290 27.9
THA.LOC104801147 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 2.5e-12 77.8 208 31.7
AL6G49300 Arabidopsis lyrata HOM05D012310 ORTHO05D012594 4.3e-12 77.0 194 32.5
BcaB03g13238 Brassica carinata HOM05D004201 ORTHO05D009648 5.6e-12 76.6 164 35.4
BcaC05g24515 Brassica carinata HOM05D004201 ORTHO05D012052 5.6e-12 76.6 139 37.4
BcaC05g29805 Brassica carinata HOM05D014826 ORTHO05D014863 5.6e-12 76.6 164 35.4
Sp6g03580 Schrenkiella parvula HOM05D012310 ORTHO05D012594 1.2e-11 75.5 151 35.1
BcaC07g38685 Brassica carinata HOM05D004201 ORTHO05D009648 1.6e-11 75.1 162 36.4
BolC8t49120H Brassica oleracea HOM05D004201 ORTHO05D009648 1.6e-11 75.1 162 36.4
BraA08t35247Z Brassica rapa HOM05D004201 ORTHO05D009648 1.6e-11 75.1 162 37.0
Aa31LG11G12550 Aethionema arabicum HOM05D004201 ORTHO05D009648 2.1e-11 74.7 171 31.0
Aa31LG11G12820 Aethionema arabicum HOM05D004201 ORTHO05D009648 2.1e-11 74.7 171 33.9
A08p33280 Brassica napus HOM05D004201 ORTHO05D009648 2.8e-11 74.3 162 36.4
Aa31LG11G12490 Aethionema arabicum HOM05D004201 ORTHO05D009648 4.7e-11 73.6 213 31.0
AL6G28160 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 4.7e-11 73.6 141 37.6
Carub.0006s3346 Capsella rubella HOM05D004201 ORTHO05D009648 4.7e-11 73.6 240 31.2
C08p14870 Brassica napus HOM05D004201 ORTHO05D009648 8.0e-11 72.8 162 35.8
BcaB08g36116 Brassica carinata HOM05D004201 ORTHO05D009648 1.1e-10 72.4 168 35.7
BraA03t12217Z Brassica rapa HOM05D012310 ORTHO05D012594 1.1e-10 72.4 159 36.5
Carub.0001s0281 Capsella rubella HOM05D004201 ORTHO05D012052 1.8e-10 71.6 212 30.2
BcaC06g31919 Brassica carinata HOM05D004201 ORTHO05D009648 2.3e-10 71.2 162 34.6
AL6G49230 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 3.1e-10 70.9 209 33.0
BcaC01g06667 Brassica carinata HOM05D012310 ORTHO05D012594 3.1e-10 70.9 159 36.5
C03p36650 Brassica napus HOM05D012310 ORTHO05D012594 3.1e-10 70.9 159 36.5
BolC3t15979H Brassica oleracea HOM05D012310 ORTHO05D012594 3.1e-10 70.9 159 36.5
A03p30350 Brassica napus HOM05D012310 ORTHO05D012594 6.8e-10 69.7 157 36.9
Aa31LG11G12530 Aethionema arabicum HOM05D004201 ORTHO05D009648 8.9e-10 69.3 211 30.8
Aa31LG11G12790 Aethionema arabicum HOM05D004201 ORTHO05D009648 2.0e-09 68.2 202 29.7
Aa31LG11G12540 Aethionema arabicum HOM05D004201 ORTHO05D009648 2.6e-09 67.8 161 34.2
AL3G16020 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 2.6e-09 67.8 38 78.9
AL6G28150 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 3.4e-09 67.4 208 26.9
THA.LOC104801562 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 3.4e-09 67.4 212 27.8
THA.LOC104809658 Tarenaya hassleriana HOM05D004201 ORTHO05D012052 4.4e-09 67.0 113 39.8
BcaB01g05218 Brassica carinata HOM05D004201 ORTHO05D009648 1.7e-08 65.1 185 32.4
AL1G13230 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 2.9e-08 64.3 243 31.7
Aa31LG11G12510 Aethionema arabicum HOM05D004201 ORTHO05D009648 3.7e-08 63.9 170 32.4
Carub.0006s1531 Capsella rubella HOM05D004201 ORTHO05D009648 3.7e-08 63.9 160 32.5
Carub.0006s1530 Capsella rubella HOM05D004201 ORTHO05D009648 3.2e-07 60.8 165 32.7
Aa31LG11G12500 Aethionema arabicum HOM05D004201 ORTHO05D009648 5.4e-07 60.1 165 33.9
BraA09t35931Z Brassica rapa HOM05D004201 ORTHO05D009648 2.1e-06 58.2 72 43.1
AT3G05685 Arabidopsis thaliana HOM05D004201 ORTHO05D031360 3.5e-06 57.4 106 34.9
Carub.0003s0573 Capsella rubella HOM05D004201 ORTHO05D014863 4.6e-06 57.0 229 31.4


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