Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G15330 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 2.2e-181 639.0 372 100.0
AL3G15510 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 6.0e-70 268.9 453 47.0
AT3G05130 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 1.6e-51 207.6 449 43.0
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 6.2e-51 205.7 447 41.2
Carub.0003s0437 Capsella rubella HOM05D004923 ORTHO05D005940 1.1e-44 184.9 200 60.5
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 1.5e-44 184.5 219 56.2
CARHR079450 Cardamine hirsuta HOM05D004923 ORTHO05D005940 8.2e-43 178.7 247 51.0
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 5.7e-36 156.0 409 39.4
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 5.7e-36 156.0 409 39.4
A05p42440 Brassica napus HOM05D004923 ORTHO05D005940 5.9e-33 146.0 392 37.5
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 2.2e-32 144.1 293 42.0
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 5.5e-31 139.4 288 40.3
BcaNung04359 Brassica carinata HOM05D004923 ORTHO05D005940 7.9e-30 135.6 289 38.1
AL6G39740 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 9.7e-28 128.6 220 42.7
BcaC01g00704 Brassica carinata HOM05D004923 ORTHO05D032366 3.1e-26 123.6 253 45.8
BolC3t20618H Brassica oleracea HOM05D004923 ORTHO05D032366 3.1e-26 123.6 253 45.8
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 6.9e-26 122.5 228 40.4
BcaNung02477 Brassica carinata HOM05D004923 ORTHO05D005940 3.4e-25 120.2 265 37.0
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 5.9e-25 119.4 392 31.6
Thhalv10003823m.g Eutrema salsugineum HOM05D004923 ORTHO05D005940 4.2e-23 113.2 223 39.0
A06p37630 Brassica napus HOM05D004923 ORTHO05D005940 3.6e-22 110.2 225 36.0
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 3.1e-18 97.1 227 30.4
THA.LOC104818671 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 2.2e-16 90.9 342 29.2
BcaC05g29999 Brassica carinata HOM05D004923 ORTHO05D005940 1.5e-15 88.2 131 49.6
THA.LOC104821702 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 2.1e-14 84.3 276 33.0
BolC7t44596H Brassica oleracea HOM05D004923 ORTHO05D005940 1.8e-13 81.3 98 46.9
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 1.8e-13 81.3 222 28.8
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 5.2e-13 79.7 202 30.7
BraA06t26683Z Brassica rapa HOM05D004923 ORTHO05D005940 6.7e-13 79.3 98 45.9
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 8.8e-13 79.0 216 31.0
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 2.6e-12 77.4 287 28.9
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 4.4e-12 76.6 291 23.7
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 4.4e-12 76.6 210 30.0
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 1.3e-11 75.1 296 25.0
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 4.8e-11 73.2 271 26.9
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 2.4e-10 70.9 228 25.9
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 4.1e-10 70.1 260 25.8
Potri.005G040500 Populus trichocarpa HOM05D004923 ORTHO05D005940 9.1e-10 68.9 256 25.4
Carub.0006s2521 Capsella rubella HOM05D004923 ORTHO05D005940 1.7e-08 64.7 410 29.5
Aa31LG11G9060 Aethionema arabicum HOM05D004923 ORTHO05D005940 3.8e-08 63.5 158 32.3
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 3.8e-08 63.5 168 33.9
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 1.1e-07 62.0 322 23.9
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 1.5e-07 61.6 285 26.7
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 2.5e-07 60.8 170 28.8
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 2.5e-07 60.8 201 25.9
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 5.5e-07 59.7 168 33.9
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 1.2e-06 58.5 168 33.3
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.6e-06 58.2 229 26.2
Sc06g0003440 Simmondsia chinensis HOM05D004923 ORTHO05D005940 1.6e-06 58.2 361 25.2
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 2.1e-06 57.8 171 29.2
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 3.6e-06 57.0 285 24.9


User provided reference genes

Program Settings