Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G14990 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 3.9e-168 594.7 304 100.0
AT3G04830 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 4.9e-163 577.8 304 97.0
Carub.0003s0402 Capsella rubella HOM05D004556 ORTHO05D005298 1.3e-160 569.7 303 95.7
Sp3g03660 Schrenkiella parvula HOM05D004556 ORTHO05D005298 3.0e-160 568.5 304 94.7
BcaB04g19297 Brassica carinata HOM05D004556 ORTHO05D005298 1.3e-158 563.1 304 93.8
BolC5t34901H Brassica oleracea HOM05D004556 ORTHO05D005298 1.3e-158 563.1 304 92.8
BraA03t12560Z Brassica rapa HOM05D004556 ORTHO05D005298 1.3e-158 563.1 302 94.0
Thhalv10021217m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 1.6e-158 562.8 304 93.8
A03p33860 Brassica napus HOM05D004556 ORTHO05D005298 2.8e-158 562.0 302 93.7
BolC3t16405H Brassica oleracea HOM05D004556 ORTHO05D005298 4.8e-158 561.2 302 93.7
BcaC01g04346 Brassica carinata HOM05D004556 ORTHO05D005298 4.0e-157 558.1 302 93.0
C05p62480 Brassica napus HOM05D004556 ORTHO05D005298 4.0e-157 558.1 304 92.4
C03p41170 Brassica napus HOM05D004556 ORTHO05D005298 1.0e-155 553.5 303 92.7
BraA05t22977Z Brassica rapa HOM05D004556 ORTHO05D005298 2.9e-155 552.0 304 92.1
A05p42760 Brassica napus HOM05D004556 ORTHO05D005298 9.3e-154 547.0 304 91.1
Aa31LG5G15220 Aethionema arabicum HOM05D004556 ORTHO05D005298 3.9e-152 541.6 316 87.7
THA.LOC104818641 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 1.4e-146 523.1 302 86.4
Thecc.05G287400 Theobroma cacao HOM05D004556 ORTHO05D005298 3.8e-139 498.4 302 84.4
AL6G40460 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 5.0e-139 498.0 303 82.8
QL03p024856 Quercus lobata HOM05D004556 ORTHO05D005298 4.2e-138 495.0 303 81.8
Gohir.A08G214400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 5.5e-138 494.6 302 83.1
COL.COLO4_15298 Corchorus olitorius HOM05D004556 ORTHO05D005298 7.2e-138 494.2 302 82.1
AT5G28220 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 9.4e-138 493.8 302 82.8
Gohir.D08G231400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 9.4e-138 493.8 302 83.1
Gorai.004G245800 Gossypium raimondii HOM05D004556 ORTHO05D005298 1.6e-137 493.0 302 83.1
Duzib128G0953 Durio zibethinus HOM05D004556 ORTHO05D005298 7.9e-137 490.7 302 83.1
Thhalv10004492m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 1.0e-136 490.3 303 82.8
Carub.0006s2567 Capsella rubella HOM05D004556 ORTHO05D005298 1.4e-136 490.0 303 81.8
Duzib106G0883 Durio zibethinus HOM05D004556 ORTHO05D005298 3.9e-136 488.4 302 81.5
CiPaw.07G064700 Carya illinoinensis HOM05D004556 ORTHO05D005298 1.5e-135 486.5 303 81.2
Duzib177G0375 Durio zibethinus HOM05D004556 ORTHO05D005298 2.6e-135 485.7 318 78.3
Gorai.007G284100 Gossypium raimondii HOM05D004556 ORTHO05D005298 5.7e-135 484.6 302 80.8
Ciclev10001991m.g Citrus clementina HOM05D004556 ORTHO05D005298 1.7e-134 483.0 304 79.3
Dinv11531 Davidia involucrata HOM05D004556 ORTHO05D005298 2.2e-134 482.6 302 80.5
Gohir.D11G264100 Gossypium hirsutum HOM05D004556 ORTHO05D005298 2.2e-134 482.6 302 80.5
PGSC0003DMG400022512 Solanum tuberosum HOM05D004556 ORTHO05D005298 3.7e-134 481.9 302 77.8
Sabra13G0036200 Salix brachista HOM05D004556 ORTHO05D005298 1.1e-133 480.3 303 78.9
Sopen01g041350 Solanum pennellii HOM05D004556 ORTHO05D005298 1.4e-133 479.9 302 77.5
Potri.005G051300 Populus trichocarpa HOM05D004556 ORTHO05D005298 1.8e-133 479.6 303 79.2
Prupe.6G340800 Prunus persica HOM05D004556 ORTHO05D005298 1.8e-133 479.6 303 80.2
Potri.013G038700 Populus trichocarpa HOM05D004556 ORTHO05D005298 2.4e-133 479.2 303 77.9
Nitab4.5_0005441g0010 Nicotiana tabacum HOM05D004556 ORTHO05D005298 7.0e-133 477.6 302 77.8
Hma1.2p1_0083F.1_g042880 Hydrangea macrophylla HOM05D004556 ORTHO05D005298 1.2e-132 476.9 303 79.2
Peaxi162Scf01049g00037 Petunia axillaris HOM05D004556 ORTHO05D005298 1.5e-132 476.5 302 77.5
MD12G1237600 Malus domestica HOM05D004556 ORTHO05D005298 2.0e-132 476.1 303 79.5
MD04G1221600 Malus domestica HOM05D004556 ORTHO05D005298 4.5e-132 474.9 303 79.9
CAN.G134.134 Capsicum annuum HOM05D004556 ORTHO05D005298 5.9e-132 474.6 302 76.5
Dinv17770 Davidia involucrata HOM05D004556 ORTHO05D005298 1.0e-131 473.8 303 78.2
TAR362G0361 Trochodendron aralioides HOM05D004556 ORTHO05D005298 1.0e-131 473.8 302 80.1
CANSAT54G0892 Cannabis sativa HOM05D004556 ORTHO05D005298 2.2e-131 472.6 303 78.5
FAN02G1055 Fragaria x ananassa HOM05D004556 ORTHO05D005298 2.2e-131 472.6 303 78.5
GSVIVG01021835001 Vitis vinifera HOM05D004556 ORTHO05D005298 2.2e-131 472.6 302 79.1
Atru.chr2.783 Acer truncatum HOM05D004556 ORTHO05D005298 5.0e-131 471.5 304 77.3
RcHm_v2.0_Chr3g0451841 Rosa chinensis HOM05D004556 ORTHO05D005298 6.5e-131 471.1 303 78.2
Sed0015548 Sechium edule HOM05D004556 ORTHO05D005298 8.5e-131 470.7 303 75.2
Glyma.03G245800 Glycine max HOM05D004556 ORTHO05D005298 1.9e-130 469.5 303 77.2
CSS0028825 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 2.5e-130 469.2 303 77.6
Cpa.g.sc117.71 Carica papaya HOM05D004556 ORTHO05D005298 4.2e-130 468.4 303 78.2
PGR083G2383 Punica granatum HOM05D004556 ORTHO05D005298 4.2e-130 468.4 303 77.2
TPR.G6984 Trifolium pratense HOM05D004556 ORTHO05D005298 4.2e-130 468.4 303 77.9
TWI56G0949 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 4.2e-130 468.4 304 78.3
VMungo0540G1874 Vigna mungo HOM05D004556 ORTHO05D005298 5.5e-130 468.0 303 76.9
FvH4_6g03340 Fragaria vesca HOM05D004556 ORTHO05D005298 1.2e-129 466.8 303 77.2
Hund22124 Selenicereus undatus HOM05D004556 ORTHO05D005298 1.2e-129 466.8 302 77.2
Aqoxy5G00420 Aquilegia oxysepala HOM05D004556 ORTHO05D005298 2.7e-129 465.7 304 76.3
FAN05G0551 Fragaria x ananassa HOM05D004556 ORTHO05D005298 2.7e-129 465.7 301 78.1
Glyma.19G243300 Glycine max HOM05D004556 ORTHO05D005298 3.6e-129 465.3 303 77.2
FAN14G0561 Fragaria x ananassa HOM05D004556 ORTHO05D005298 4.7e-129 464.9 301 77.7
Actinidia05768 Actinidia chinensis HOM05D004556 ORTHO05D005298 6.1e-129 464.5 304 77.6
arahy.Tifrunner.gnm1.ann1.SCJ0TV Arachis hypogaea HOM05D004556 ORTHO05D005298 8.0e-129 464.2 303 76.2
ClCG02G016480 Citrullus lanatus HOM05D004556 ORTHO05D005298 1.0e-128 463.8 303 74.9
CsaV3_2G004290 Cucumis sativus L. HOM05D004556 ORTHO05D005298 1.0e-128 463.8 303 74.9
Medtr7g114810 Medicago truncatula HOM05D004556 ORTHO05D005298 1.0e-128 463.8 303 77.9
Eucgr.B01695 Eucalyptus grandis HOM05D004556 ORTHO05D005298 1.4e-128 463.4 303 76.2
Sed0026396 Sechium edule HOM05D004556 ORTHO05D005298 1.4e-128 463.4 303 74.6
arahy.Tifrunner.gnm1.ann1.ZA55QJ Arachis hypogaea HOM05D004556 ORTHO05D005298 2.3e-128 462.6 302 76.5
Lalb_Chr15g0076861 Lupinus albus HOM05D004556 ORTHO05D005298 2.3e-128 462.6 303 76.9
Phvul.006G100100 Phaseolus vulgaris HOM05D004556 ORTHO05D005298 2.3e-128 462.6 303 76.6
MELO3C004366.2 Cucumis melo HOM05D004556 ORTHO05D005298 3.0e-128 462.2 303 74.6
EL10Ac8g19247 Beta vulgaris HOM05D004556 ORTHO05D005298 3.9e-128 461.8 303 75.9
Ca_09410_v3 Cicer arietinum L. HOM05D004556 ORTHO05D005298 3.9e-128 461.8 303 76.6
FAN05G3160 Fragaria x ananassa HOM05D004556 ORTHO05D005298 3.9e-128 461.8 298 78.2
Manes.09G154700 Manihot esculenta HOM05D004556 ORTHO05D005298 5.2e-128 461.5 303 75.9
TAR365G0624 Trochodendron aralioides HOM05D004556 ORTHO05D005298 6.7e-128 461.1 302 77.8
CSS0008105 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 2.0e-127 459.5 303 77.2
MSTRG.5093 Avicennia marina HOM05D004556 ORTHO05D005298 2.6e-127 459.1 301 76.1
Cfa006453 Carpinus fangiana HOM05D004556 ORTHO05D005298 3.3e-127 458.8 303 76.6
SGA_v2.0_scaffold196G40974 Striga asiatica HOM05D004556 ORTHO05D005298 3.3e-127 458.8 303 76.2
Rhsim05G0160800 Rhododendron simsii HOM05D004556 ORTHO05D005298 4.4e-127 458.4 303 76.9
AUR62034008 Chenopodium quinoa HOM05D004556 ORTHO05D005298 5.7e-127 458.0 301 76.7
Lalb_Chr18g0045051 Lupinus albus HOM05D004556 ORTHO05D005298 7.4e-127 457.6 303 75.9
Sc09g0003820 Simmondsia chinensis HOM05D004556 ORTHO05D005298 7.4e-127 457.6 303 76.9
unitig_0.g2302 Utricularia gibba HOM05D004556 ORTHO05D005298 7.4e-127 457.6 301 75.1
Lj1g0006589 Lotus japonicus HOM05D004556 ORTHO05D005298 9.7e-127 457.2 303 76.6
SGA_v2.0_scaffold43G16266 Striga asiatica HOM05D004556 ORTHO05D005298 9.7e-127 457.2 302 76.5
AUR62027473 Chenopodium quinoa HOM05D004556 ORTHO05D005298 4.8e-126 454.9 302 75.8
DCAR_029537 Daucus carota HOM05D004556 ORTHO05D005298 1.1e-125 453.8 302 75.2
Cc02_g31820 Coffea canephora HOM05D004556 ORTHO05D005298 1.4e-125 453.4 304 74.7
SalBow4G3027 Salvia bowleyana HOM05D004556 ORTHO05D005298 2.4e-125 452.6 303 75.2
ECA232G2012 Erigeron canadensis HOM05D004556 ORTHO05D005298 3.1e-125 452.2 301 77.1
Lsat_1_v5_gn_1_96700 Lactuca sativa HOM05D004556 ORTHO05D005298 1.6e-124 449.9 302 75.2
HanXRQChr08g0230031 Helianthus annuus HOM05D004556 ORTHO05D005298 1.0e-123 447.2 302 75.2
PSO210G7536 Papaver somniferum HOM05D004556 ORTHO05D005298 1.0e-123 447.2 302 74.8
PSO832G3279 Papaver somniferum HOM05D004556 ORTHO05D005298 1.9e-122 443.0 302 73.8
ATR0665G084 Amborella trichopoda HOM05D004556 ORTHO05D005298 7.2e-122 441.0 302 73.2
Nitab4.5_0005729g0050 Nicotiana tabacum HOM05D004556 ORTHO05D005298 1.2e-121 440.3 302 73.2
vmacro21412 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 8.0e-121 437.6 324 70.4
Sabra05G0045300 Salix brachista HOM05D004556 ORTHO05D005298 1.8e-120 436.4 341 68.3
HPP92_025859 Vanilla planifolia HOM05D004556 ORTHO05D005298 6.8e-120 434.5 302 73.2
SalBow4G2463 Salvia bowleyana HOM05D004556 ORTHO05D005298 5.7e-119 431.4 338 68.0
Ah.14g085270 Amaranthus hybridus HOM05D004556 ORTHO05D005298 2.8e-118 429.1 293 73.7
CDE10G0245 Ceratophyllum demersum HOM05D004556 ORTHO05D005298 1.1e-117 427.2 301 72.1
MBI11_g10323_MAGBIO Magnolia biondii HOM05D004556 ORTHO05D005298 1.4e-117 426.8 308 69.8
Solyc01g097740.3 Solanum lycopersicum HOM05D004556 ORTHO05D005298 1.6e-113 413.3 262 77.1
Manes.08G132100 Manihot esculenta HOM05D004556 ORTHO05D005298 1.0e-112 410.6 249 81.1
CARHR079090 Cardamine hirsuta HOM05D004556 ORTHO05D005298 3.0e-112 409.1 221 94.1
Os02g0127000 Oryza sativa ssp. japonica HOM05D004556 ORTHO05D005298 6.8e-112 407.9 296 67.6
SEGI_22763 Sequoiadendron giganteum HOM05D004556 ORTHO05D005298 8.8e-112 407.5 301 66.4
Dinv00306 Davidia involucrata HOM05D004556 ORTHO05D005298 1.2e-111 407.1 242 83.1
SHI18353 Sapria himalayana HOM05D004556 ORTHO05D005298 5.7e-111 404.8 341 62.5
TWI12G0865 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 1.1e-109 400.6 304 70.4
Zm00001eb210860 Zea mays HOM05D004556 ORTHO05D005298 5.9e-108 394.8 296 65.5
Zm00001eb064390 Zea mays HOM05D004556 ORTHO05D005298 4.2e-106 388.7 291 66.0
Oeu045907.1 Olea europaea HOM05D004556 ORTHO05D005298 1.0e-104 384.0 312 66.0
HanXRQChr11g0340961 Helianthus annuus HOM05D004556 ORTHO05D005298 1.2e-103 380.6 302 66.6
THA.LOC104821680 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 1.7e-102 376.7 209 89.5
Nn1g02409 Nelumbo nucifera HOM05D004556 ORTHO05D005298 2.2e-102 376.3 302 66.6
Pp3c22_11510 Physcomitrium patens HOM05D004556 ORTHO05D005298 9.2e-101 370.9 301 62.5
Mapoly0010s0190 Marchantia polymorpha HOM05D004556 ORTHO05D005298 2.0e-95 353.2 294 63.6
Psat3g008080 Pisum sativum HOM05D004556 ORTHO05D005298 4.9e-94 348.6 209 82.3
Gohir.A11G254300 Gossypium hirsutum HOM05D004556 ORTHO05D005298 6.4e-94 348.2 302 63.9
vmacro21326 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 7.3e-90 334.7 512 42.4
SMO351G0459 Selaginella moellendorffii HOM05D004556 ORTHO05D005298 4.0e-88 328.9 290 56.6
Haze_04338 Corylus avellana HOM05D004556 ORTHO05D005298 2.7e-84 316.2 202 79.2
AagrBONN_evm.TU.Sc2ySwM_228.926 Anthoceros agrestis HOM05D004556 ORTHO05D005298 1.1e-74 284.3 246 57.7
Lj9C665G12 Lonicera japonica HOM05D004556 ORTHO05D005298 2.1e-73 280.0 241 63.9
CBR_g2743 Chara braunii HOM05D004556 ORTHO05D005298 6.2e-73 278.5 300 50.0
Rhsim05G0161200 Rhododendron simsii HOM05D004556 ORTHO05D005298 2.7e-68 263.1 245 60.4
Actinidia30934 Actinidia chinensis HOM05D004556 ORTHO05D005298 1.1e-61 241.1 154 80.5
PRCOL_00003723 Prasinoderma coloniale HOM05D004556 ORTHO05D005298 3.2e-53 213.0 287 41.8
Cre13.g579950 Chlamydomonas reinhardtii HOM05D004556 ORTHO05D005298 4.0e-48 196.1 300 39.0
AagrBONN_evm.TU.Sc2ySwM_228.922 Anthoceros agrestis HOM05D004556 ORTHO05D005298 3.2e-45 186.4 148 61.5
TAR636G2079 Trochodendron aralioides HOM05D001851 ORTHO05D002237 2.3e-43 180.3 130 70.8
Migut.O00800 Erythranthe guttata HOM05D004556 ORTHO05D005298 1.0e-38 164.9 102 78.4
CARHR079080 Cardamine hirsuta HOM05D004556 ORTHO05D005298 3.8e-38 162.9 107 81.3
Lj9C668G11 Lonicera japonica HOM05D004556 ORTHO05D005298 1.2e-31 141.4 198 45.5
Potri.013G038501 Populus trichocarpa HOM05D004556 ORTHO05D005298 1.5e-31 141.0 84 81.0
BolC3t16406H Brassica oleracea HOM05D004556 ORTHO05D005298 2.0e-31 140.6 84 84.5
MCO08G289 Micromonas commoda HOM05D004556 ORTHO05D005298 2.5e-21 107.1 259 27.0
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 9.4e-21 105.1 148 41.9
Lj9C665T13 Lonicera japonica HOM05D004556 ORTHO05D005298 7.9e-20 102.1 70 72.9
HanXRQChr13g0394071 Helianthus annuus HOM05D004556 ORTHO05D005298 1.4e-19 101.3 63 76.2
RcHm_v2.0_Chr6g0244381 Rosa chinensis HOM05D004556 ORTHO05D005298 1.4e-19 101.3 87 66.7
AagrBONN_evm.TU.Sc2ySwM_228.821 Anthoceros agrestis HOM05D004556 ORTHO05D005298 9.7e-18 95.1 149 39.6
BcaB04g19294 Brassica carinata HOM05D004556 ORTHO05D005298 1.8e-16 90.9 87 60.9
RcHm_v2.0_Chr5g0051541 Rosa chinensis HOM05D004556 ORTHO05D005298 2.4e-16 90.5 121 47.1
TPR.G31876 Trifolium pratense HOM05D004556 ORTHO05D005298 2.4e-16 90.5 86 60.5
Sp1g08890 Schrenkiella parvula HOM05D000111 ORTHO05D013786 4.8e-09 66.2 63 61.9
RcHm_v2.0_Chr7g0229041 Rosa chinensis HOM05D004556 ORTHO05D005298 2.0e-07 60.8 40 70.0


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