Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G14430 Arabidopsis lyrata HOM05D005077 ORTHO05D006889 0.0e+00 1419.4 718 100.0
AT3G04480 Arabidopsis thaliana HOM05D005077 ORTHO05D006889 0.0e+00 1334.3 719 94.4
Carub.0003s0364 Capsella rubella HOM05D005077 ORTHO05D006889 0.0e+00 1302.0 722 91.8
Thhalv10020155m.g Eutrema salsugineum HOM05D005077 ORTHO05D006889 0.0e+00 1285.4 722 90.2
CARHR078630 Cardamine hirsuta HOM05D005077 ORTHO05D006889 0.0e+00 1272.3 725 89.1
BcaB04g19332 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1234.9 723 87.0
BcaC05g30222 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1228.0 722 86.8
BraA03t12537Z Brassica rapa HOM05D005077 ORTHO05D006889 0.0e+00 1220.3 723 86.3
A05p43000 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1215.7 722 86.7
BraA05t23044Z Brassica rapa HOM05D005077 ORTHO05D006889 0.0e+00 1212.6 726 86.0
A03p33620 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1201.8 724 85.1
BcaC01g04375 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1200.7 724 84.8
C03p40820 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1200.7 724 84.8
C05p62770 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1196.0 721 85.2
BolC5t34930H Brassica oleracea HOM05D005077 ORTHO05D006889 0.0e+00 1190.6 721 85.0
BolC3t16351H Brassica oleracea HOM05D005077 ORTHO05D006889 0.0e+00 1176.4 730 83.3
Aa31LG5G14920 Aethionema arabicum HOM05D005077 ORTHO05D006889 0.0e+00 1157.9 743 80.8
BcaC05g29939 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1155.6 724 83.1
THA.LOC104827285 Tarenaya hassleriana HOM05D005077 ORTHO05D006889 0.0e+00 1095.1 728 76.4
BcaC05g30195 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1093.6 718 79.9
Gohir.D11G257100 Gossypium hirsutum HOM05D005077 ORTHO05D006889 4.3e-274 948.0 746 66.8
Gorai.007G275500 Gossypium raimondii HOM05D005077 ORTHO05D006889 5.6e-274 947.6 746 66.6
Duzib177G0384 Durio zibethinus HOM05D005077 ORTHO05D006889 6.2e-273 944.1 746 65.4
MD04G1230700 Malus domestica HOM05D005077 ORTHO05D006889 2.4e-272 942.2 742 64.7
Thecc.05G270400 Theobroma cacao HOM05D005077 ORTHO05D006889 1.5e-271 939.5 747 66.1
Cfa006359 Carpinus fangiana HOM05D005077 ORTHO05D006889 1.0e-267 926.8 746 64.2
Sp3g03330 Schrenkiella parvula HOM05D005077 ORTHO05D006889 4.8e-265 917.9 541 85.8
GSVIVG01023486001 Vitis vinifera HOM05D005077 ORTHO05D006889 1.2e-263 913.3 741 63.6
Prupe.6G350500 Prunus persica HOM05D005077 ORTHO05D006889 1.5e-263 912.9 751 63.6
Potri.013G047400 Populus trichocarpa HOM05D005077 ORTHO05D006889 5.8e-263 911.0 747 64.4
Potri.019G019600 Populus trichocarpa HOM05D005077 ORTHO05D006889 2.2e-262 909.1 744 64.2
COL.COLO4_15493 Corchorus olitorius HOM05D005077 ORTHO05D006889 4.9e-262 907.9 759 63.2
CiPaw.07G073200 Carya illinoinensis HOM05D005077 ORTHO05D006889 3.2e-261 905.2 746 62.9
CANSAT54G1999 Cannabis sativa HOM05D005077 ORTHO05D006889 2.3e-259 899.0 743 62.9
Manes.08G139800 Manihot esculenta HOM05D005077 ORTHO05D006889 8.7e-259 897.1 741 63.4
Actinidia39994 Actinidia chinensis HOM05D005077 ORTHO05D006889 3.3e-258 895.2 746 62.9
Lj1g0022218 Lotus japonicus HOM05D005077 ORTHO05D006889 1.4e-256 889.8 740 62.2
TAR362G0145 Trochodendron aralioides HOM05D005077 ORTHO05D006889 9.0e-256 887.1 741 62.5
PGR142G0621 Punica granatum HOM05D005077 ORTHO05D006889 1.2e-255 886.7 740 63.2
FvH4_6g01810 Fragaria vesca HOM05D005077 ORTHO05D006889 1.5e-255 886.3 740 61.6
Glyma.19G115700 Glycine max HOM05D005077 ORTHO05D006889 1.7e-254 882.9 749 61.4
RcHm_v2.0_Chr3g0449521 Rosa chinensis HOM05D005077 ORTHO05D006889 1.7e-254 882.9 737 62.0
Cpa.g.sc306.8 Carica papaya HOM05D005077 ORTHO05D006889 1.4e-253 879.8 660 67.4
TWI36G1092 Tripterygium wilfordii HOM05D005077 ORTHO05D006889 5.5e-253 877.9 745 61.6
Ca_08303_v3 Cicer arietinum L. HOM05D005077 ORTHO05D006889 2.1e-252 875.9 775 59.1
VMungo1383G1518 Vigna mungo HOM05D005077 ORTHO05D006889 1.3e-251 873.2 741 60.6
Solyc04g010080.3 Solanum lycopersicum HOM05D005077 ORTHO05D006889 2.5e-250 869.0 738 62.6
Phvul.001G114900 Phaseolus vulgaris HOM05D005077 ORTHO05D006889 3.3e-250 868.6 746 60.5
Sopen04g005220 Solanum pennellii HOM05D005077 ORTHO05D006889 9.6e-250 867.1 744 62.5
ECA238G3062 Erigeron canadensis HOM05D005077 ORTHO05D006889 2.4e-248 862.4 732 60.8
HanXRQChr14g0454211 Helianthus annuus HOM05D005077 ORTHO05D006889 4.0e-248 861.7 744 60.2
Aqoxy5G00195 Aquilegia oxysepala HOM05D005077 ORTHO05D006889 1.5e-247 859.8 744 60.6
TPR.G4698 Trifolium pratense HOM05D005077 ORTHO05D006889 3.4e-247 858.6 749 60.1
MELO3C008703.2 Cucumis melo HOM05D005077 ORTHO05D006889 1.9e-245 852.8 737 60.0
Sed0014730 Sechium edule HOM05D005077 ORTHO05D006889 1.9e-245 852.8 738 60.6
PGSC0003DMG400011494 Solanum tuberosum HOM05D005077 ORTHO05D006889 3.2e-245 852.0 763 60.3
MBI10_g13801_MAGBIO Magnolia biondii HOM05D005077 ORTHO05D006889 4.2e-245 851.7 719 61.2
Sc20g0000660 Simmondsia chinensis HOM05D005077 ORTHO05D006889 5.5e-245 851.3 738 61.1
MSTRG.27374 Avicennia marina HOM05D005077 ORTHO05D006889 1.2e-244 850.1 747 60.5
PSO210G4243 Papaver somniferum HOM05D005077 ORTHO05D006889 1.2e-244 850.1 742 60.4
PSO832G3809 Papaver somniferum HOM05D005077 ORTHO05D006889 1.6e-244 849.7 744 60.6
SalBow3G3009 Salvia bowleyana HOM05D005077 ORTHO05D006889 2.1e-244 849.4 743 59.9
Medtr7g111650 Medicago truncatula HOM05D005077 ORTHO05D006889 6.0e-244 847.8 743 59.2
Migut.F00798 Erythranthe guttata HOM05D005077 ORTHO05D006889 1.5e-242 843.2 743 59.8
Psat3g087440 Pisum sativum HOM05D005077 ORTHO05D006889 1.5e-242 843.2 746 59.0
EL10Ac9g21459 Beta vulgaris HOM05D005077 ORTHO05D006889 1.3e-241 840.1 738 59.2
Oeu006006.2 Olea europaea HOM05D005077 ORTHO05D006889 3.7e-241 838.6 745 59.3
FAN14G3018 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.1e-240 837.0 776 57.6
FAN09G0372 Fragaria x ananassa HOM05D005077 ORTHO05D006889 4.1e-240 835.1 775 57.5
Atru.chr2.993 Acer truncatum HOM05D005077 ORTHO05D006889 1.2e-239 833.6 606 69.8
FAN14G2113 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.0e-238 830.5 777 56.9
Sabra19G0032000 Salix brachista HOM05D005077 ORTHO05D006889 1.0e-238 830.5 832 57.0
Eucgr.B02151 Eucalyptus grandis HOM05D005077 ORTHO05D006889 2.9e-238 828.9 746 59.1
Rhsim05G0172000 Rhododendron simsii HOM05D005077 ORTHO05D006889 3.8e-238 828.6 770 58.6
Lsat_1_v5_gn_2_108321 Lactuca sativa HOM05D005077 ORTHO05D006889 4.2e-237 825.1 725 59.7
ATR0736G030 Amborella trichopoda HOM05D005077 ORTHO05D006889 1.8e-235 819.7 735 59.0
ClCG11G010550 Citrullus lanatus HOM05D005077 ORTHO05D006889 3.3e-234 815.5 733 58.9
Lj2A44T74 Lonicera japonica HOM05D005077 ORTHO05D006889 5.7e-234 814.7 800 56.2
CSS0033596 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D006889 6.3e-233 811.2 673 63.3
AUR62013106 Chenopodium quinoa HOM05D005077 ORTHO05D006889 9.0e-232 807.4 757 57.1
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea HOM05D005077 ORTHO05D006889 1.3e-230 803.5 743 57.6
Nitab4.5_0006737g0070 Nicotiana tabacum HOM05D005077 ORTHO05D006889 1.9e-229 799.7 768 56.6
Nn1g02888 Nelumbo nucifera HOM05D005077 ORTHO05D006889 3.2e-229 798.9 671 62.1
Gohir.A11G246900 Gossypium hirsutum HOM05D005077 ORTHO05D006889 7.2e-229 797.7 669 64.0
Hund06905 Selenicereus undatus HOM05D005077 ORTHO05D006889 1.6e-228 796.6 756 57.7
Ciclev10019185m.g Citrus clementina HOM05D005077 ORTHO05D006889 1.4e-227 793.5 669 62.8
vmacro19987 Vaccinium macrocarpon HOM05D005077 ORTHO05D006889 6.3e-225 784.6 823 53.5
QL07p018541 Quercus lobata HOM05D005077 ORTHO05D006889 3.1e-224 782.3 661 62.2
Os02g0810450 Oryza sativa ssp. japonica HOM05D005077 ORTHO05D006889 1.1e-221 773.9 738 56.8
Lalb_Chr22g0358841 Lupinus albus HOM05D005077 ORTHO05D006889 3.8e-214 748.8 668 58.4
HPP92_014753 Vanilla planifolia HOM05D005077 ORTHO05D006889 2.5e-213 746.1 740 54.7
Sabra13G0043400 Salix brachista HOM05D005077 ORTHO05D006889 5.2e-211 738.4 719 56.9
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea HOM05D005077 ORTHO05D006889 7.5e-210 734.6 761 53.4
DCAR_003547 Daucus carota HOM05D005077 ORTHO05D006889 1.0e-206 724.2 752 53.9
SGA_v2.0_scaffold1G00651 Striga asiatica HOM05D005077 ORTHO05D006889 1.0e-206 724.2 808 51.0
Cc02_g08770 Coffea canephora HOM05D005077 ORTHO05D006889 3.6e-204 715.7 657 58.0
Dinv35947 Davidia involucrata HOM05D005077 ORTHO05D006889 2.6e-202 709.5 569 66.1
Peaxi162Scf00528g00225 Petunia axillaris HOM05D005077 ORTHO05D006889 2.6e-202 709.5 740 53.4
CsaV3_2G009810 Cucumis sativus L. HOM05D005077 ORTHO05D006889 2.8e-201 706.1 653 57.3
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea HOM05D005077 ORTHO05D006889 9.5e-197 691.0 736 51.6
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea HOM05D005077 ORTHO05D006889 2.1e-196 689.9 743 51.8
CDE07G0212 Ceratophyllum demersum HOM05D005077 ORTHO05D006889 1.2e-188 664.1 727 49.8
Nitab4.5_0003780g0090 Nicotiana tabacum HOM05D005077 ORTHO05D006889 2.0e-186 656.8 743 52.0
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla HOM05D005077 ORTHO05D006889 1.3e-182 644.0 617 56.6
unitig_748.g6990 Utricularia gibba HOM05D005077 ORTHO05D006889 1.6e-175 620.5 746 48.5
CAN.G786.40 Capsicum annuum HOM05D005077 ORTHO05D006889 2.5e-173 613.2 615 55.3
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis HOM05D005077 ORTHO05D006889 2.8e-172 609.8 780 47.2
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea HOM05D005077 ORTHO05D006889 1.5e-165 587.4 743 47.0
Pp3c11_830 Physcomitrium patens HOM05D005077 ORTHO05D006889 1.5e-165 587.4 579 53.9
Zm00001eb258450 Zea mays HOM05D005077 ORTHO05D006889 5.8e-162 575.5 629 51.8
Haze_04419 Corylus avellana HOM05D005077 ORTHO05D006889 1.9e-160 570.5 929 40.9
Mapoly0027s0145 Marchantia polymorpha HOM05D005077 ORTHO05D006889 8.1e-156 555.1 597 50.8
SMO348G0068 Selaginella moellendorffii HOM05D005077 ORTHO05D006889 1.1e-152 544.7 541 54.3
CBR_g3613 Chara braunii HOM05D005077 ORTHO05D006889 1.3e-150 537.7 609 49.6
Oeu041238.1 Olea europaea HOM05D005077 ORTHO05D006889 4.9e-145 519.2 645 50.1
Eucgr.B02424 Eucalyptus grandis HOM05D005077 ORTHO05D006889 1.3e-132 478.0 527 50.5
SEGI_09343 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.1e-128 464.9 393 61.3
AUR62010111 Chenopodium quinoa HOM05D005077 ORTHO05D006889 2.0e-109 401.0 393 52.9
MCO10G045 Micromonas commoda HOM05D005077 ORTHO05D006889 3.2e-88 330.5 618 35.6
PGSC0003DMG400019115 Solanum tuberosum HOM05D005077 ORTHO05D006889 2.7e-87 327.4 339 53.1
PRCOL_00005667 Prasinoderma coloniale HOM05D005077 ORTHO05D006889 5.4e-75 286.6 541 36.0
Cre01.g033091 Chlamydomonas reinhardtii HOM05D005077 ORTHO05D006889 6.1e-71 273.1 252 55.2
SEGI_01626 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 3.5e-58 230.7 373 38.9
SEGI_03702 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 2.2e-52 211.5 228 49.6
SEGI_18706 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 2.2e-52 211.5 228 49.6
Cfa026934 Carpinus fangiana HOM05D005077 ORTHO05D006889 1.2e-50 205.7 579 30.6
SHI22754 Sapria himalayana HOM05D005077 ORTHO05D006889 1.9e-48 198.4 161 65.2
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 1.5e-40 172.2 102 87.3
FAN05G0362 Fragaria x ananassa HOM05D005077 ORTHO05D006889 3.3e-40 171.0 150 60.0
Duzib106G1915 Durio zibethinus HOM05D005077 ORTHO05D006889 5.8e-37 160.2 162 53.1
FAN05G3606 Fragaria x ananassa HOM05D005077 ORTHO05D019498 2.2e-36 158.3 183 46.4
Lalb_Chr22g0358851 Lupinus albus HOM05D005077 ORTHO05D006889 3.9e-33 147.5 77 88.3
QL07p018546 Quercus lobata HOM05D005077 ORTHO05D006889 6.6e-33 146.7 77 87.0
Cc02_g08780 Coffea canephora HOM05D005077 ORTHO05D006889 3.6e-31 141.0 77 84.4
C08p13010 Brassica napus HOM05D005077 ORTHO05D006889 4.8e-23 114.0 56 96.4
PGSC0003DMG400019116 Solanum tuberosum HOM05D005077 ORTHO05D018175 1.6e-18 99.0 106 49.1
BcaC05g29940 Brassica carinata HOM05D005077 ORTHO05D018175 2.7e-18 98.2 191 41.9
arahy.Tifrunner.gnm1.ann1.TVQ2CS Arachis hypogaea HOM05D005077 ORTHO05D006889 3.0e-17 94.7 168 39.3
EL10Ac5g11645 Beta vulgaris HOM05D005077 ORTHO05D006889 4.3e-16 90.9 50 80.0
Peaxi162Scf00528g00025 Petunia axillaris HOM05D000011 ORTHO05D015719 2.4e-14 85.1 62 59.7
C05p29450 Brassica napus HOM05D005077 ORTHO05D018175 3.1e-14 84.7 65 75.4
BolC5t31675H Brassica oleracea HOM05D005077 ORTHO05D018175 3.1e-14 84.7 65 75.4
CSS0009313 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 2.9e-12 78.2 78 52.6
Atru.chr2.994 Acer truncatum HOM05D005077 ORTHO05D018175 1.9e-11 75.5 92 50.0
CSS0021399 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 3.3e-08 64.7 67 50.7
Hund05190 Selenicereus undatus HOM05D005077 ORTHO05D006889 3.3e-08 64.7 56 57.1
CSS0037989 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 9.7e-08 63.2 67 50.7


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