Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G14310 Arabidopsis lyrata HOM05D008834 ORTHO05D011314 4.4e-115 417.9 204 100.0
AT3G04320 Arabidopsis thaliana HOM05D008834 ORTHO05D011314 6.8e-108 394.0 204 93.6
Carub.0003s0353 Capsella rubella HOM05D008834 ORTHO05D011314 2.4e-97 359.0 202 87.1
AT3G04330 Arabidopsis thaliana HOM05D008834 ORTHO05D011314 1.4e-89 333.2 203 83.3
CARHR078500 Cardamine hirsuta HOM05D008834 ORTHO05D011314 3.1e-84 315.5 201 77.1
AL3G14320 Arabidopsis lyrata HOM05D008834 ORTHO05D011314 9.6e-78 293.9 204 76.0
BcaC04g23732 Brassica carinata HOM05D008834 ORTHO05D011314 5.4e-65 251.5 205 64.9
C09p05270 Brassica napus HOM05D008834 ORTHO05D011314 5.4e-65 251.5 205 64.9
BcaB04g19619 Brassica carinata HOM05D008834 ORTHO05D011314 3.9e-63 245.4 205 62.4
BolC9t53454H Brassica oleracea HOM05D008834 ORTHO05D011314 1.1e-62 243.8 204 63.2
A09p04880 Brassica napus HOM05D008834 ORTHO05D011314 9.6e-62 240.7 205 62.0
BraA09t36125Z Brassica rapa HOM05D008834 ORTHO05D011314 1.5e-59 233.4 213 59.6
Sp2g30790 Schrenkiella parvula HOM05D008834 ORTHO05D011314 4.6e-56 221.9 192 59.9
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 3.8e-50 202.2 206 55.3
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 1.9e-49 199.9 206 54.4
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 1.2e-48 197.2 199 55.3
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 3.5e-48 195.7 205 53.2
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 3.5e-48 195.7 205 53.2
BcaB04g19618 Brassica carinata HOM05D008834 ORTHO05D011314 1.1e-46 190.7 197 53.3
Thhalv10027937m.g Eutrema salsugineum HOM05D008834 ORTHO05D011314 9.3e-41 171.0 179 53.1
A09p14850 Brassica napus HOM05D008834 ORTHO05D011314 2.9e-26 122.9 173 44.5
C09p17980 Brassica napus HOM05D008834 ORTHO05D011314 1.1e-25 120.9 184 43.5
BcaC04g22551 Brassica carinata HOM05D008834 ORTHO05D011314 9.4e-25 117.9 184 44.0
BraA09t37131Z Brassica rapa HOM05D008834 ORTHO05D011314 1.2e-24 117.5 179 43.0
BolC9t54694H Brassica oleracea HOM05D008834 ORTHO05D011314 1.6e-24 117.1 185 43.8
A01p21740 Brassica napus HOM05D008834 ORTHO05D011314 1.1e-22 110.9 185 42.2
BraA01t02083Z Brassica rapa HOM05D008834 ORTHO05D011314 1.1e-22 110.9 185 42.2
BolC1t02656H Brassica oleracea HOM05D008834 ORTHO05D011314 6.3e-21 105.1 196 38.3
BcaC08g46552 Brassica carinata HOM05D008834 ORTHO05D011314 9.1e-20 101.3 167 42.5
Thhalv10023952m.g Eutrema salsugineum HOM05D008834 ORTHO05D011314 1.6e-19 100.5 125 48.0
C09p17130 Brassica napus HOM05D008834 ORTHO05D011314 2.6e-19 99.8 170 40.6
BcaC04g22636 Brassica carinata HOM05D008834 ORTHO05D011314 7.7e-19 98.2 167 40.7
BraA07t31310Z Brassica rapa HOM05D008834 ORTHO05D011314 1.3e-18 97.4 182 41.2
BolC9t54594H Brassica oleracea HOM05D008834 ORTHO05D011314 4.7e-16 89.0 175 41.7
BcaC09g50271 Brassica carinata HOM05D008834 ORTHO05D011314 1.2e-14 84.3 178 37.1
A05p21740 Brassica napus HOM05D008834 ORTHO05D011314 7.5e-14 81.6 183 39.9
BraA05t21095Z Brassica rapa HOM05D008834 ORTHO05D011314 7.5e-14 81.6 183 39.9
Thhalv10010972m.g Eutrema salsugineum HOM05D020464 ORTHO05D023357 2.0e-11 73.6 154 34.4
BcaC08g46549 Brassica carinata HOM05D008834 ORTHO05D011314 2.7e-11 73.2 120 42.5
A08p31540 Brassica napus HOM05D008834 ORTHO05D040119 4.5e-11 72.4 163 35.6
BraA08t35076Z Brassica rapa HOM05D008834 ORTHO05D040119 4.5e-11 72.4 163 35.6
Aa31sc179G50 Aethionema arabicum HOM05D020464 ORTHO05D023357 1.0e-10 71.2 175 34.9
Aa31LG4G8060 Aethionema arabicum HOM05D020464 ORTHO05D023357 1.5e-09 67.4 157 35.7
C06p45230 Brassica napus HOM05D008834 ORTHO05D011314 2.7e-08 63.2 71 49.3
Aa31LG4G8050 Aethionema arabicum HOM05D020464 ORTHO05D023357 3.0e-07 59.7 136 36.8
DCAR_011685 Daucus carota HOM05D000535 ORTHO05D000427 4.0e-07 59.3 168 31.5


User provided reference genes

Program Settings