Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G13530 Arabidopsis lyrata HOM05D003871 ORTHO05D023606 4.4e-200 701.0 344 100.0
BraA01t04563Z Brassica rapa HOM05D055439 ORTHO05D023606 9.3e-33 145.2 359 29.0
A09p53200 Brassica napus HOM05D003871 ORTHO05D004621 2.3e-15 87.4 350 26.3
BraA09t40745Z Brassica rapa HOM05D003871 ORTHO05D004621 5.1e-15 86.3 343 26.2
C08p35990 Brassica napus HOM05D003871 ORTHO05D004621 6.7e-15 85.9 349 26.1
BolC8t51181H Brassica oleracea HOM05D003871 ORTHO05D004621 6.7e-15 85.9 349 26.1
BcaC07g40617 Brassica carinata HOM05D003871 ORTHO05D004621 1.5e-14 84.7 347 26.2
BcaC07g42655 Brassica carinata HOM05D003871 ORTHO05D004621 2.5e-14 84.0 346 25.4
Psat4g151960 Pisum sativum HOM05D003871 ORTHO05D004621 3.3e-14 83.6 344 25.6
Os03g0116500 Oryza sativa ssp. japonica HOM05D003871 ORTHO05D004621 5.6e-14 82.8 342 25.7
PSO782G3116 Papaver somniferum HOM05D003871 ORTHO05D004621 7.4e-14 82.4 348 26.4
Ca_07858_v3 Cicer arietinum L. HOM05D003871 ORTHO05D004621 9.6e-14 82.0 346 24.3
VMungo0331G1218 Vigna mungo HOM05D003871 ORTHO05D004621 9.6e-14 82.0 344 25.6
Glyma.03G016800 Glycine max HOM05D003871 ORTHO05D004621 1.6e-13 81.3 348 25.0
THA.LOC104802015 Tarenaya hassleriana HOM05D003871 ORTHO05D004621 1.6e-13 81.3 353 24.6
BcaC08g45104 Brassica carinata HOM05D003871 ORTHO05D004621 2.1e-13 80.9 353 24.6
Glyma.07G077100 Glycine max HOM05D003871 ORTHO05D004621 2.8e-13 80.5 348 25.0
PSO478G4452 Papaver somniferum HOM05D003871 ORTHO05D004621 2.8e-13 80.5 348 26.4
BcaB02g07388 Brassica carinata HOM05D003871 ORTHO05D004621 4.8e-13 79.7 355 24.2
AL5G43380 Arabidopsis lyrata HOM05D003871 ORTHO05D004621 6.2e-13 79.3 353 25.2
Sp5g02240 Schrenkiella parvula HOM05D003871 ORTHO05D004621 6.2e-13 79.3 353 24.6
A07p25320 Brassica napus HOM05D003871 ORTHO05D004621 8.1e-13 79.0 363 24.8
C06p27130 Brassica napus HOM05D003871 ORTHO05D004621 8.1e-13 79.0 363 24.5
Carub.0005s2779 Capsella rubella HOM05D003871 ORTHO05D004621 8.1e-13 79.0 355 24.5
CDE11G1114 Ceratophyllum demersum HOM05D003871 ORTHO05D004621 8.1e-13 79.0 355 26.2
Mapoly0035s0029 Marchantia polymorpha HOM05D003871 ORTHO05D004621 8.1e-13 79.0 354 24.9
HPP92_007366 Vanilla planifolia HOM05D003871 ORTHO05D004621 8.1e-13 79.0 342 24.9
Thhalv10005978m.g Eutrema salsugineum HOM05D003871 ORTHO05D004621 1.1e-12 78.6 353 24.9
FvH4_7g13330 Fragaria vesca HOM05D003871 ORTHO05D004621 1.1e-12 78.6 355 25.4
BolC6t37886H Brassica oleracea HOM05D003871 ORTHO05D004621 1.4e-12 78.2 364 24.2
CDE02G2895 Ceratophyllum demersum HOM05D003871 ORTHO05D004621 1.4e-12 78.2 355 26.5
Lj3g0009639 Lotus japonicus HOM05D003871 ORTHO05D004621 1.4e-12 78.2 346 25.1
arahy.Tifrunner.gnm1.ann1.6U8ZH2 Arachis hypogaea HOM05D003871 ORTHO05D004621 1.8e-12 77.8 350 24.6
CARHR171420 Cardamine hirsuta HOM05D003871 ORTHO05D004621 1.8e-12 77.8 342 24.0
Phvul.010G090500 Phaseolus vulgaris HOM05D003871 ORTHO05D004621 1.8e-12 77.8 344 25.0
Psat3g113760 Pisum sativum HOM05D003871 ORTHO05D004621 1.8e-12 77.8 347 24.8
SalBow3G3192 Salvia bowleyana HOM05D003871 ORTHO05D004621 1.8e-12 77.8 356 25.6
arahy.Tifrunner.gnm1.ann1.AB99XC Arachis hypogaea HOM05D003871 ORTHO05D004621 2.4e-12 77.4 350 24.6
FAN10G0206 Fragaria x ananassa HOM05D003871 ORTHO05D004621 2.4e-12 77.4 359 25.1
Pp3c11_20980 Physcomitrium patens HOM05D003871 ORTHO05D004621 2.4e-12 77.4 352 25.0
TPR.G17571 Trifolium pratense HOM05D003871 ORTHO05D004621 2.4e-12 77.4 348 24.7
FAN10G4186 Fragaria x ananassa HOM05D003871 ORTHO05D004621 4.0e-12 76.6 348 24.7
Lalb_Chr10g0097451 Lupinus albus HOM05D003871 ORTHO05D004621 4.0e-12 76.6 344 23.8
ATR0757G035 Amborella trichopoda HOM05D003871 ORTHO05D004621 5.3e-12 76.3 342 24.9
Aqoxy7G00418 Aquilegia oxysepala HOM05D003871 ORTHO05D004621 5.3e-12 76.3 342 24.3
MSTRG.20801 Avicennia marina HOM05D003871 ORTHO05D004621 5.3e-12 76.3 348 25.9
PGR042G2189 Punica granatum HOM05D003871 ORTHO05D004621 5.3e-12 76.3 346 24.9
EL10Ac1g00989 Beta vulgaris HOM05D003871 ORTHO05D004621 9.0e-12 75.5 342 23.4
Manes.05G039500 Manihot esculenta HOM05D003871 ORTHO05D004621 9.0e-12 75.5 346 25.1
PGSC0003DMG400027768 Solanum tuberosum HOM05D003871 ORTHO05D004621 9.0e-12 75.5 344 25.9
AT3G61140 Arabidopsis thaliana HOM05D003871 ORTHO05D004621 1.2e-11 75.1 356 24.7
CANSAT56G3752 Cannabis sativa HOM05D003871 ORTHO05D004621 1.5e-11 74.7 346 24.6
arahy.Tifrunner.gnm1.ann1.I68A9W Arachis hypogaea HOM05D003871 ORTHO05D004621 2.0e-11 74.3 376 25.0
arahy.Tifrunner.gnm1.ann1.WVA4TF Arachis hypogaea HOM05D003871 ORTHO05D004621 2.0e-11 74.3 376 25.0
FAN01G1876 Fragaria x ananassa HOM05D003871 ORTHO05D004621 2.0e-11 74.3 367 24.5
FAN03G3137 Fragaria x ananassa HOM05D003871 ORTHO05D004621 2.0e-11 74.3 367 24.5
FAN06G4052 Fragaria x ananassa HOM05D003871 ORTHO05D004621 2.0e-11 74.3 367 24.5
Potri.002G154500 Populus trichocarpa HOM05D003871 ORTHO05D004621 2.0e-11 74.3 348 25.0
MD07G1127800 Malus domestica HOM05D003871 ORTHO05D004621 2.6e-11 73.9 346 24.3
Prupe.2G156700 Prunus persica HOM05D003871 ORTHO05D004621 3.4e-11 73.6 342 24.0
Sed0001471 Sechium edule HOM05D003871 ORTHO05D004621 3.4e-11 73.6 346 24.9
MELO3C006142.2 Cucumis melo HOM05D003871 ORTHO05D004621 4.5e-11 73.2 348 25.3
Migut.B01700 Erythranthe guttata HOM05D003871 ORTHO05D004621 4.5e-11 73.2 344 26.5
Sabra02G0122500 Salix brachista HOM05D003871 ORTHO05D004621 4.5e-11 73.2 348 24.7
TPR.G37846 Trifolium pratense HOM05D003871 ORTHO05D004621 4.5e-11 73.2 346 24.0
TWI14G1012 Tripterygium wilfordii HOM05D003871 ORTHO05D004621 4.5e-11 73.2 343 24.5
Aa31LG10G15210 Aethionema arabicum HOM05D003871 ORTHO05D004621 5.8e-11 72.8 358 24.0
AUR62004300 Chenopodium quinoa HOM05D003871 ORTHO05D004621 5.8e-11 72.8 341 23.2
Eucgr.E00211 Eucalyptus grandis HOM05D003871 ORTHO05D004621 5.8e-11 72.8 350 24.3
Potri.014G075500 Populus trichocarpa HOM05D003871 ORTHO05D004621 5.8e-11 72.8 348 23.6
CsaV3_3G009220 Cucumis sativus L. HOM05D003871 ORTHO05D004621 7.6e-11 72.4 348 25.3
Sc23g0003210 Simmondsia chinensis HOM05D003871 ORTHO05D004621 7.6e-11 72.4 343 24.8
Zm00001eb001110 Zea mays HOM05D003871 ORTHO05D004621 1.0e-10 72.0 342 23.1
Solyc01g091650.3 Solanum lycopersicum HOM05D003871 ORTHO05D004621 1.3e-10 71.6 348 25.6
Hund27317 Selenicereus undatus HOM05D003871 ORTHO05D004621 2.2e-10 70.9 342 23.1
AagrBONN_evm.TU.Sc2ySwM_362.2141 Anthoceros agrestis HOM05D003871 ORTHO05D004621 2.9e-10 70.5 309 24.6
Cc02_g37360 Coffea canephora HOM05D003871 ORTHO05D004621 2.9e-10 70.5 342 24.3
DCAR_016001 Daucus carota HOM05D003871 ORTHO05D004621 2.9e-10 70.5 355 23.7
Sed0018711 Sechium edule HOM05D003871 ORTHO05D004621 2.9e-10 70.5 349 25.2
ClCG05G001830 Citrullus lanatus HOM05D003871 ORTHO05D004621 3.8e-10 70.1 355 24.8
Peaxi162Scf00021g00920 Petunia axillaris HOM05D003871 ORTHO05D004621 3.8e-10 70.1 340 24.4
Atru.chr5.417 Acer truncatum HOM05D003871 ORTHO05D004621 4.9e-10 69.7 347 24.8
HanXRQChr17g0560011 Helianthus annuus HOM05D003871 ORTHO05D004621 4.9e-10 69.7 347 25.4
Medtr7g076160 Medicago truncatula HOM05D003871 ORTHO05D004621 4.9e-10 69.7 346 24.0
CiPaw.02G026000 Carya illinoinensis HOM05D003871 ORTHO05D004621 6.5e-10 69.3 342 24.0
Duzib138G1891 Durio zibethinus HOM05D003871 ORTHO05D004621 6.5e-10 69.3 350 23.7
FAN06G3893 Fragaria x ananassa HOM05D003871 ORTHO05D004621 6.5e-10 69.3 367 24.0
Lalb_Chr17g0339991 Lupinus albus HOM05D003871 ORTHO05D004621 6.5e-10 69.3 344 24.1
Hund16957 Selenicereus undatus HOM05D003871 ORTHO05D004621 8.4e-10 68.9 342 22.8
Ciclev10020177m.g Citrus clementina HOM05D003871 ORTHO05D004621 1.4e-09 68.2 342 24.0
Dinv16518 Davidia involucrata HOM05D003871 ORTHO05D004621 1.9e-09 67.8 351 23.6
Sopen01g037420 Solanum pennellii HOM05D003871 ORTHO05D004621 1.9e-09 67.8 348 25.3
QL08p050260 Quercus lobata HOM05D003871 ORTHO05D004621 2.5e-09 67.4 338 23.7
TWI23G1177 Tripterygium wilfordii HOM05D003871 ORTHO05D004621 2.5e-09 67.4 347 23.9
CSS0026628 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 3.2e-09 67.0 349 24.9
CSS0039371 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 3.2e-09 67.0 349 24.9
CAN.G170.26 Capsicum annuum HOM05D003871 ORTHO05D004621 3.2e-09 67.0 352 24.1
CiPaw.02G026100 Carya illinoinensis HOM05D003871 ORTHO05D004621 3.2e-09 67.0 342 23.7
Nitab4.5_0004973g0020 Nicotiana tabacum HOM05D003871 ORTHO05D004621 3.2e-09 67.0 343 24.8
MSTRG.4874 Avicennia marina HOM05D003871 ORTHO05D004621 4.2e-09 66.6 342 25.1
unitig_22.g5361 Utricularia gibba HOM05D003871 ORTHO05D004621 4.2e-09 66.6 349 23.5
Nn1g01381 Nelumbo nucifera HOM05D003871 ORTHO05D004621 5.5e-09 66.2 373 23.1
GSVIVG01027510001 Vitis vinifera HOM05D003871 ORTHO05D004621 5.5e-09 66.2 346 23.1
HanXRQChr16g0523641 Helianthus annuus HOM05D003871 ORTHO05D004621 7.1e-09 65.9 346 23.4
Hma1.2p1_0033F.1_g020520 Hydrangea macrophylla HOM05D003871 ORTHO05D004621 7.1e-09 65.9 346 23.4
ECA234G1945 Erigeron canadensis HOM05D003871 ORTHO05D005816 9.3e-09 65.5 353 22.9
CSS0031493 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 1.2e-08 65.1 349 24.6
CSS0038711 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 1.2e-08 65.1 349 24.6
Dinv43765 Davidia involucrata HOM05D003871 ORTHO05D004621 1.6e-08 64.7 347 24.2
Nitab4.5_0005109g0020 Nicotiana tabacum HOM05D003871 ORTHO05D004621 2.1e-08 64.3 378 23.8
SMO365G0068 Selaginella moellendorffii HOM05D003871 ORTHO05D004621 2.1e-08 64.3 348 23.3
SGA_v2.0_scaffold153G37076 Striga asiatica HOM05D003871 ORTHO05D004621 7.9e-08 62.4 344 23.8
AT3G12850 Arabidopsis thaliana HOM05D061468 ORTHO05D038599 1.5e-06 58.2 328 22.3
Haze_15212 Corylus avellana HOM05D003871 ORTHO05D004621 1.9e-06 57.8 369 22.2


User provided reference genes

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