Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G13300 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 1.9e-42 175.3 78 100.0
Carub.0008s1729 Capsella rubella HOM05D009469 ORTHO05D011620 9.4e-26 119.8 64 78.1
A06p26430 Brassica napus HOM05D009469 ORTHO05D011620 3.4e-23 111.3 64 73.4
BNapus_Darmor_BZH_scaffold_78p00180 Brassica napus HOM05D009469 ORTHO05D011620 3.4e-23 111.3 64 73.4
BraA01t04575Z Brassica rapa HOM05D009469 ORTHO05D011620 5.7e-23 110.5 64 73.4
BcaC09g47751 Brassica carinata HOM05D009469 ORTHO05D011620 1.3e-22 109.4 64 71.9
BNapus_Darmor_BZH_scaffold_162p00200 Brassica napus HOM05D009469 ORTHO05D011620 1.3e-22 109.4 64 71.9
BolC1t05826H Brassica oleracea HOM05D009469 ORTHO05D011620 1.1e-21 106.3 64 70.3
Carub.0003s0269 Capsella rubella HOM05D009469 ORTHO05D011620 3.1e-21 104.8 67 68.7
THA.LOC104798617 Tarenaya hassleriana HOM05D009469 ORTHO05D011620 2.3e-19 98.6 59 66.1
THA.LOC104824563 Tarenaya hassleriana HOM05D002657 ORTHO05D003059 1.8e-13 79.0 47 61.7
THA.LOC109117075 Tarenaya hassleriana HOM05D002657 ORTHO05D012605 1.8e-13 79.0 47 61.7
AL8G38430 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 7.3e-10 67.0 56 48.2
AL8G38470 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 7.3e-10 67.0 56 48.2
Carub.0007s3645 Capsella rubella HOM05D009469 ORTHO05D011620 1.6e-09 65.9 60 50.0
Carub.0008s2240 Capsella rubella HOM05D009469 ORTHO05D011620 1.0e-08 63.2 52 46.2
A01p27840 Brassica napus HOM05D009469 ORTHO05D011620 2.3e-08 62.0 52 42.3
BraA01t02921Z Brassica rapa HOM05D009469 ORTHO05D011620 2.3e-08 62.0 52 42.3
BraA01t02924Z Brassica rapa HOM05D009469 ORTHO05D011620 2.3e-08 62.0 52 42.3
BraA01t02925Z Brassica rapa HOM05D009469 ORTHO05D011620 2.3e-08 62.0 52 42.3
AL6G25820 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 5.2e-08 60.8 50 46.0
Sp6g29040 Schrenkiella parvula HOM05D009469 ORTHO05D011620 5.2e-08 60.8 51 43.1
AT2G22155 Arabidopsis thaliana HOM05D010340 ORTHO05D012605 1.2e-07 59.7 57 45.6
AL6G25800 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 1.5e-07 59.3 50 44.0
Duzib150G0010 Durio zibethinus HOM05D010340 ORTHO05D012605 1.5e-07 59.3 63 44.4
CARHR198310 Cardamine hirsuta HOM05D009469 ORTHO05D011620 1.3e-06 56.2 63 31.7
C01p35370 Brassica napus HOM05D009469 ORTHO05D011620 2.9e-06 55.1 52 38.5
BolC1t03493H Brassica oleracea HOM05D009469 ORTHO05D011620 2.9e-06 55.1 52 38.5
AT5G15000 Arabidopsis thaliana HOM05D009469 ORTHO05D011620 6.4e-06 53.9 50 40.0
C04p53210 Brassica napus HOM05D010340 ORTHO05D012605 8.3e-06 53.5 67 35.8
C04p53300 Brassica napus HOM05D010340 ORTHO05D012605 8.3e-06 53.5 67 35.8
C04p53370 Brassica napus HOM05D010340 ORTHO05D012605 8.3e-06 53.5 65 36.9
BolC4t26885H Brassica oleracea HOM05D010340 ORTHO05D012605 8.3e-06 53.5 67 35.8
BolC4t26891H Brassica oleracea HOM05D010340 ORTHO05D012605 8.3e-06 53.5 65 36.9
TWI34G1530 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 8.3e-06 53.5 51 45.1


User provided reference genes

Program Settings