Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G12820 Arabidopsis lyrata HOM05D005127 ORTHO05D006022 3.6e-216 754.6 369 100.0
AT3G03210 Arabidopsis thaliana HOM05D005127 ORTHO05D006022 1.5e-209 732.6 369 96.7
CARHR077230 Cardamine hirsuta HOM05D005127 ORTHO05D006022 4.4e-206 721.1 369 95.7
Carub.0003s0236 Capsella rubella HOM05D005127 ORTHO05D006022 1.7e-205 719.2 369 94.6
Sp3g02250 Schrenkiella parvula HOM05D005127 ORTHO05D006022 7.0e-204 713.8 369 93.8
Thhalv10020974m.g Eutrema salsugineum HOM05D005127 ORTHO05D006022 1.3e-197 693.0 370 91.1
BcaC05g30528 Brassica carinata HOM05D005127 ORTHO05D006022 1.5e-190 669.5 370 88.1
BolC5t35029H Brassica oleracea HOM05D005127 ORTHO05D006022 3.4e-190 668.3 370 88.1
C05p63600 Brassica napus HOM05D005127 ORTHO05D006022 7.5e-190 667.2 370 87.8
Aa31LG5G13690 Aethionema arabicum HOM05D005127 ORTHO05D006022 8.3e-189 663.7 371 86.5
A05p43980 Brassica napus HOM05D005127 ORTHO05D006022 2.4e-188 662.1 370 87.6
BraSC90t46712Z Brassica rapa HOM05D005127 ORTHO05D006022 3.9e-186 654.8 370 86.2
BcaC05g30317 Brassica carinata HOM05D005127 ORTHO05D006022 1.7e-181 639.4 369 85.9
Cpa.g.sc178.24 Carica papaya HOM05D005127 ORTHO05D006022 3.0e-162 575.5 372 75.3
THA.LOC104827223 Tarenaya hassleriana HOM05D005127 ORTHO05D006022 1.1e-159 567.0 372 77.2
Ciclev10012019m.g Citrus clementina HOM05D005127 ORTHO05D006022 1.1e-151 540.4 372 69.9
COL.COLO4_19768 Corchorus olitorius HOM05D005127 ORTHO05D006022 9.9e-150 533.9 372 68.0
Thecc.04G065100 Theobroma cacao HOM05D005127 ORTHO05D006022 1.3e-146 523.5 372 67.7
Duzib138G1903 Durio zibethinus HOM05D005127 ORTHO05D006022 4.3e-145 518.5 372 67.7
Atru.chr1.2154 Acer truncatum HOM05D005127 ORTHO05D006022 5.6e-145 518.1 372 68.5
Manes.10G079000 Manihot esculenta HOM05D005127 ORTHO05D006022 1.1e-143 513.8 375 66.1
Gohir.A07G074000 Gossypium hirsutum HOM05D005127 ORTHO05D006022 4.9e-141 505.0 373 64.9
Gorai.001G083200 Gossypium raimondii HOM05D005127 ORTHO05D006022 4.9e-141 505.0 373 65.1
Gohir.D07G078700 Gossypium hirsutum HOM05D005127 ORTHO05D006022 8.4e-141 504.2 373 64.9
Gorai.002G111000 Gossypium raimondii HOM05D005127 ORTHO05D006022 1.3e-138 496.9 371 65.5
TWI74G1018 Tripterygium wilfordii HOM05D005127 ORTHO05D006022 3.0e-138 495.7 374 65.8
Gohir.D01G085400 Gossypium hirsutum HOM05D005127 ORTHO05D006022 1.1e-137 493.8 371 65.0
Gohir.A01G100900 Gossypium hirsutum HOM05D005127 ORTHO05D006022 4.3e-137 491.9 371 65.2
Potri.017G139800 Populus trichocarpa HOM05D005127 ORTHO05D006022 6.9e-135 484.6 372 64.5
Sabra17G0118000 Salix brachista HOM05D005127 ORTHO05D006022 4.5e-134 481.9 372 64.5
MELO3C020241.2 Cucumis melo HOM05D005127 ORTHO05D006022 5.8e-134 481.5 372 62.1
CsaV3_3G021100 Cucumis sativus L. HOM05D005127 ORTHO05D006022 1.0e-133 480.7 372 62.6
Sed0023234 Sechium edule HOM05D005127 ORTHO05D006022 8.4e-133 477.6 372 62.6
Potri.004G080600 Populus trichocarpa HOM05D005127 ORTHO05D006022 1.4e-132 476.9 373 64.3
ClCG05G011360 Citrullus lanatus HOM05D005127 ORTHO05D006022 2.5e-132 476.1 372 61.6
Sabra04G0053400 Salix brachista HOM05D005127 ORTHO05D006022 4.2e-132 475.3 372 64.2
CiPaw.03G076300 Carya illinoinensis HOM05D005127 ORTHO05D006022 2.3e-130 469.5 372 62.6
Prupe.3G014700 Prunus persica HOM05D005127 ORTHO05D006022 8.2e-128 461.1 377 61.3
TAR371G0217 Trochodendron aralioides HOM05D005127 ORTHO05D006022 8.2e-128 461.1 372 61.0
Haze_14318 Corylus avellana HOM05D005127 ORTHO05D006022 7.7e-126 454.5 372 61.6
Cfa007754 Carpinus fangiana HOM05D005127 ORTHO05D006022 5.0e-125 451.8 372 61.0
Aqoxy3G04119 Aquilegia oxysepala HOM05D005127 ORTHO05D006022 3.2e-124 449.1 372 58.3
PGR042G2448 Punica granatum HOM05D005127 ORTHO05D006022 4.2e-124 448.7 383 61.1
MD09G1279600 Malus domestica HOM05D005127 ORTHO05D006022 2.7e-123 446.0 377 58.9
CSS0034699 Camellia sinensis var. sinensis HOM05D005127 ORTHO05D006022 1.4e-122 443.7 372 61.0
RcHm_v2.0_Chr3g0488741 Rosa chinensis HOM05D005127 ORTHO05D006022 1.4e-122 443.7 372 60.8
Lalb_Chr10g0104061 Lupinus albus HOM05D005127 ORTHO05D006022 3.9e-122 442.2 377 59.4
Glyma.14G210400 Glycine max HOM05D005127 ORTHO05D006022 5.1e-122 441.8 376 60.4
Glyma.02G240800 Glycine max HOM05D005127 ORTHO05D006022 1.1e-121 440.7 378 60.1
VMungo0647G1176 Vigna mungo HOM05D005127 ORTHO05D006022 1.5e-121 440.3 372 61.8
FAN23G3138 Fragaria x ananassa HOM05D005127 ORTHO05D006022 2.5e-121 439.5 372 59.9
Eucgr.H04888 Eucalyptus grandis HOM05D005127 ORTHO05D006022 3.3e-121 439.1 380 60.3
FvH4_1g27360 Fragaria vesca HOM05D005127 ORTHO05D006022 7.4e-121 438.0 372 59.7
CANSAT21G1480 Cannabis sativa HOM05D005127 ORTHO05D006022 1.3e-120 437.2 372 58.9
FAN28G1653 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.3e-120 437.2 372 59.7
FAN28G2393 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.3e-120 437.2 372 59.7
FAN19G2113 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.7e-120 436.8 372 59.4
Hma1.2p1_0158F.1_g069660 Hydrangea macrophylla HOM05D005127 ORTHO05D006022 1.1e-119 434.1 373 58.7
Phvul.008G240900 Phaseolus vulgaris HOM05D005127 ORTHO05D006022 1.1e-119 434.1 372 61.0
Rhsim08G0021200 Rhododendron simsii HOM05D005127 ORTHO05D006022 1.8e-119 433.3 375 59.7
QL02p064340 Quercus lobata HOM05D005127 ORTHO05D006022 3.1e-119 432.6 363 59.8
Lalb_Chr17g0345881 Lupinus albus HOM05D005127 ORTHO05D006022 7.7e-118 427.9 380 58.2
PSO724G0684 Papaver somniferum HOM05D005127 ORTHO05D006022 1.0e-117 427.6 375 57.6
PSO729G0281 Papaver somniferum HOM05D005127 ORTHO05D006022 1.0e-117 427.6 375 57.3
FAN26G1075 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.7e-117 426.8 371 58.2
Ca_05761_v3 Cicer arietinum L. HOM05D005127 ORTHO05D006022 2.9e-117 426.0 383 58.5
Psat2g042880 Pisum sativum HOM05D005127 ORTHO05D006022 3.8e-117 425.6 379 57.8
Gorai.007G188500 Gossypium raimondii HOM05D005127 ORTHO05D006022 8.5e-117 424.5 366 57.1
Medtr5g076930 Medicago truncatula HOM05D005127 ORTHO05D006022 1.4e-116 423.7 377 57.6
MBI06_g13889_MAGBIO Magnolia biondii HOM05D005127 ORTHO05D006022 1.2e-115 420.6 372 57.3
TPR.G5353 Trifolium pratense HOM05D005127 ORTHO05D006022 2.7e-115 419.5 389 56.6
ATR0807G162 Amborella trichopoda HOM05D005127 ORTHO05D006022 1.1e-113 414.1 372 56.5
Gohir.A11G169700 Gossypium hirsutum HOM05D005127 ORTHO05D006022 1.1e-113 414.1 352 57.1
PGSC0003DMG400016729 Solanum tuberosum HOM05D005127 ORTHO05D006022 1.5e-113 413.7 376 56.6
Sopen02g025870 Solanum pennellii HOM05D005127 ORTHO05D006022 2.0e-113 413.3 380 57.4
Actinidia35707 Actinidia chinensis HOM05D005127 ORTHO05D006022 4.8e-112 408.7 371 57.7
Cc07_g12800 Coffea canephora HOM05D005127 ORTHO05D006022 1.4e-111 407.1 376 56.4
Sc09g0004500 Simmondsia chinensis HOM05D005127 ORTHO05D006022 1.4e-111 407.1 376 56.4
Nitab4.5_0000091g0380 Nicotiana tabacum HOM05D005127 ORTHO05D006022 1.2e-110 404.1 378 56.1
Migut.H02248 Erythranthe guttata HOM05D005127 ORTHO05D006022 2.0e-110 403.3 370 55.7
Nitab4.5_0004645g0030 Nicotiana tabacum HOM05D005127 ORTHO05D006022 2.6e-110 402.9 379 55.1
MSTRG.15431 Avicennia marina HOM05D005127 ORTHO05D006022 3.5e-110 402.5 372 56.5
Sopen03g005720 Solanum pennellii HOM05D005127 ORTHO05D006022 2.2e-109 399.8 378 55.8
Solyc03g031850.1 Solanum lycopersicum HOM05D005127 ORTHO05D006022 2.9e-109 399.4 378 55.8
LjContig00141g0000865 Lotus japonicus HOM05D005127 ORTHO05D006022 8.5e-109 397.9 378 56.1
GSVIVG01035235001 Vitis vinifera HOM05D005127 ORTHO05D006022 1.1e-108 397.5 370 57.0
Lj4P252T15 Lonicera japonica HOM05D005127 ORTHO05D006022 1.4e-108 397.1 352 57.4
CAN.G404.4 Capsicum annuum HOM05D005127 ORTHO05D006022 1.9e-108 396.7 377 56.0
Dinv19078 Davidia involucrata HOM05D005127 ORTHO05D006022 2.5e-108 396.4 372 55.1
PGSC0003DMG400042292 Solanum tuberosum HOM05D005127 ORTHO05D006022 2.5e-108 396.4 382 54.7
Peaxi162Scf00521g00053 Petunia axillaris HOM05D005127 ORTHO05D006022 5.5e-108 395.2 376 54.8
SGA_v2.0_scaffold135G34932 Striga asiatica HOM05D005127 ORTHO05D006022 1.6e-107 393.7 372 54.0
Oeu012525.1 Olea europaea HOM05D005127 ORTHO05D006022 2.1e-107 393.3 386 54.9
Gohir.D11G175900 Gossypium hirsutum HOM05D005127 ORTHO05D006022 3.9e-106 389.0 366 54.6
Nitab4.5_0007410g0020 Nicotiana tabacum HOM05D005127 ORTHO05D006022 8.8e-106 387.9 375 55.5
Nitab4.5_0010422g0010 Nicotiana tabacum HOM05D005127 ORTHO05D006022 4.8e-104 382.1 369 54.2
HanXRQChr14g0443471 Helianthus annuus HOM05D005127 ORTHO05D006022 3.1e-103 379.4 370 54.1
SHI30090 Sapria himalayana HOM05D005127 ORTHO05D006022 4.1e-103 379.0 368 53.0
Lsat_1_v5_gn_2_71721 Lactuca sativa HOM05D005127 ORTHO05D006022 2.0e-102 376.7 360 54.2
CAN.G1681.7 Capsicum annuum HOM05D005127 ORTHO05D006022 3.5e-102 375.9 374 53.7
Oeu039702.1 Olea europaea HOM05D005127 ORTHO05D006022 1.7e-101 373.6 382 52.6
AUR62037482 Chenopodium quinoa HOM05D005127 ORTHO05D009825 8.5e-101 371.3 374 53.2
DCAR_003746 Daucus carota HOM05D005127 ORTHO05D006022 4.4e-97 359.0 360 51.1
SalBow3G2114 Salvia bowleyana HOM05D005127 ORTHO05D006022 5.2e-90 335.5 337 52.5
SalBow3G1912 Salvia bowleyana HOM05D005127 ORTHO05D006022 6.8e-90 335.1 337 52.5
Zm00001eb393730 Zea mays HOM05D005127 ORTHO05D006022 1.4e-82 310.8 378 45.2
SEGI_34462 Sequoiadendron giganteum HOM05D005127 ORTHO05D006022 1.8e-82 310.5 457 39.2
Os10g0539400 Oryza sativa ssp. japonica HOM05D005127 ORTHO05D006022 2.4e-79 300.1 370 44.6
CDE01G0221 Ceratophyllum demersum HOM05D005127 ORTHO05D006022 5.0e-77 292.4 301 49.5
ECA238G3642 Erigeron canadensis HOM05D005127 ORTHO05D006022 1.5e-76 290.8 299 50.2
Mapoly0003s0310 Marchantia polymorpha HOM05D005127 ORTHO05D006022 7.5e-73 278.5 383 40.5
Zm00001eb022160 Zea mays HOM05D005127 ORTHO05D006022 1.3e-72 277.7 359 42.9
CDE02G3442 Ceratophyllum demersum HOM05D005127 ORTHO05D006022 3.2e-71 273.1 371 41.5
Migut.H02247 Erythranthe guttata HOM05D005127 ORTHO05D006022 3.6e-67 259.6 347 40.1
Oeu045801.1 Olea europaea HOM05D005127 ORTHO05D006022 8.0e-67 258.5 345 41.7
SMO141G0134 Selaginella moellendorffii HOM05D005127 ORTHO05D006022 5.4e-63 245.7 377 37.7
Pp3c8_14800 Physcomitrium patens HOM05D005127 ORTHO05D006022 1.9e-60 237.3 369 37.1
unitig_699.g19573 Utricularia gibba HOM05D005127 ORTHO05D006022 1.4e-58 231.1 228 55.7
Solyc02g081230.4 Solanum lycopersicum HOM05D005127 ORTHO05D006022 3.5e-54 216.5 183 58.5
HPP92_020636 Vanilla planifolia HOM05D005127 ORTHO05D006022 1.6e-51 207.6 202 47.0
AUR62004769 Chenopodium quinoa HOM05D005127 ORTHO05D006022 4.7e-51 206.1 196 51.5
AagrBONN_evm.TU.Sc2ySwM_228.805 Anthoceros agrestis HOM05D005127 ORTHO05D006022 4.9e-48 196.1 255 38.4
PSO063G7663 Papaver somniferum HOM05D005127 ORTHO05D006022 3.5e-46 189.9 176 57.4
AagrBONN_evm.TU.Sc2ySwM_117.2318 Anthoceros agrestis HOM05D005127 ORTHO05D006022 9.6e-44 181.8 242 39.3
AL3G25840 Arabidopsis lyrata HOM05D005127 ORTHO05D006022 7.8e-38 162.2 96 82.3
AL8G37650 Arabidopsis lyrata HOM05D005127 ORTHO05D006022 7.8e-38 162.2 96 82.3
Gorai.004G162300 Gossypium raimondii HOM05D005127 ORTHO05D006022 1.0e-37 161.8 127 60.6
Gorai.009G350000 Gossypium raimondii HOM05D000154 ORTHO05D006022 1.1e-36 158.3 127 59.1
Lsat_1_v5_gn_2_6720 Lactuca sativa HOM05D005127 ORTHO05D006022 1.9e-36 157.5 161 50.3
CBR_g39794 Chara braunii HOM05D005127 ORTHO05D006022 3.6e-35 153.3 290 31.0
Gorai.005G117100 Gossypium raimondii HOM05D005127 ORTHO05D006022 6.9e-34 149.1 127 58.3
Lsat_1_v5_gn_5_127001 Lactuca sativa HOM05D005127 ORTHO05D006022 4.5e-33 146.4 142 52.1
Medtr5g076940 Medicago truncatula HOM05D005127 ORTHO05D006022 9.6e-28 128.6 108 59.3
MCO15G483 Micromonas commoda HOM05D005127 ORTHO05D006022 1.3e-24 118.2 288 27.4
Gohir.D05G325801 Gossypium hirsutum HOM05D000154 ORTHO05D006022 6.5e-24 115.9 90 60.0
Gorai.011G105200 Gossypium raimondii HOM05D000154 ORTHO05D006022 8.4e-24 115.5 90 60.0
Gohir.D08G156000 Gossypium hirsutum HOM05D005127 ORTHO05D006022 4.2e-23 113.2 90 58.9
Gorai.002G056700 Gossypium raimondii HOM05D005127 ORTHO05D006022 3.9e-21 106.7 90 55.6
RcHm_v2.0_Chr5g0042551 Rosa chinensis HOM05D005127 ORTHO05D006022 1.9e-20 104.4 109 49.5
Gohir.D04G098033 Gossypium hirsutum HOM05D005127 ORTHO05D006022 3.3e-20 103.6 95 54.7
RcHm_v2.0_Chr5g0027411 Rosa chinensis HOM05D005127 ORTHO05D006022 5.7e-20 102.8 246 34.6
RcHm_v2.0_Chr4g0398381 Rosa chinensis HOM05D005127 ORTHO05D006022 1.2e-17 95.1 95 56.8
A09p28600 Brassica napus HOM05D005127 ORTHO05D006022 1.5e-17 94.7 58 79.3
Gohir.D02G103100 Gossypium hirsutum HOM05D000154 ORTHO05D006022 2.7e-14 84.0 67 56.7
GSVIVG01034874001 Vitis vinifera HOM05D005127 ORTHO05D006022 5.7e-12 76.3 77 51.9
Nn2g14442 Nelumbo nucifera HOM05D005127 ORTHO05D006022 7.4e-12 75.9 45 84.4
GSVIVG01000363001 Vitis vinifera HOM05D005127 ORTHO05D006022 2.8e-11 73.9 65 55.4
Dinv28241 Davidia involucrata HOM05D005127 ORTHO05D006022 3.7e-11 73.6 110 45.5
GSVIVG01038053001 Vitis vinifera HOM05D005127 ORTHO05D006022 1.1e-10 72.0 59 57.6
vmacro09980 Vaccinium macrocarpon HOM05D000060 ORTHO05D003150 8.5e-08 62.4 82 46.3


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