Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 1.1e-59 233.0 111 100.0
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 2.4e-59 231.9 111 99.1
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 1.2e-58 229.6 111 98.2
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 1.2e-58 229.6 111 98.2
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 2.7e-58 228.4 111 97.3
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 7.8e-58 226.9 111 96.4
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 1.0e-57 226.5 112 97.3
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 2.1e-55 218.8 112 92.9
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 8.1e-55 216.9 113 92.9
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 1.5e-53 212.6 113 91.2
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 3.4e-53 211.5 113 91.2
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 3.4e-53 211.5 113 91.2
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 5.4e-51 204.1 112 87.5
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 1.6e-50 202.6 112 86.6
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 2.7e-50 201.8 112 86.6
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 4.9e-44 181.0 111 78.4
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.9e-43 179.1 111 78.4
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 6.0e-42 174.1 111 74.8
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 2.3e-41 172.2 111 73.9
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 6.6e-41 170.6 113 73.5
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 8.7e-41 170.2 112 75.0
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 1.5e-40 169.5 111 73.0
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.5e-40 168.7 109 72.5
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 2.5e-40 168.7 109 72.5
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 5.6e-40 167.5 109 72.5
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 7.3e-40 167.2 111 72.1
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 1.3e-39 166.4 112 70.5
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 1.3e-39 166.4 111 73.0
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 1.6e-39 166.0 109 72.5
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 1.6e-39 166.0 109 71.6
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 2.1e-39 165.6 112 70.5
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.1e-39 165.6 109 70.6
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.1e-39 165.6 112 71.4
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 2.8e-39 165.2 114 68.4
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 3.6e-39 164.9 112 69.6
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 3.6e-39 164.9 114 70.2
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 3.6e-39 164.9 112 71.4
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 4.8e-39 164.5 110 70.9
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 4.8e-39 164.5 111 71.2
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 6.2e-39 164.1 112 71.4
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 8.1e-39 163.7 112 69.6
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 1.1e-38 163.3 112 70.5
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 1.1e-38 163.3 112 70.5
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 1.4e-38 162.9 111 69.4
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 1.4e-38 162.9 113 71.7
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 1.8e-38 162.5 111 71.2
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 3.1e-38 161.8 112 72.3
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 3.1e-38 161.8 112 70.5
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 4.0e-38 161.4 113 67.3
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 4.0e-38 161.4 113 69.9
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 4.0e-38 161.4 114 67.5
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 5.3e-38 161.0 109 69.7
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 5.3e-38 161.0 112 70.5
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 6.9e-38 160.6 110 68.2
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 6.9e-38 160.6 120 65.8
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 1.2e-37 159.8 112 68.8
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.2e-37 159.8 112 67.9
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 1.5e-37 159.5 114 67.5
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 1.5e-37 159.5 112 69.6
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 1.5e-37 159.5 113 68.1
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 2.0e-37 159.1 111 68.5
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 2.0e-37 159.1 111 66.7
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 2.0e-37 159.1 114 66.7
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 2.6e-37 158.7 112 68.8
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 3.4e-37 158.3 114 68.4
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 3.4e-37 158.3 112 66.1
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 4.5e-37 157.9 114 67.5
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 4.5e-37 157.9 112 70.5
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 5.8e-37 157.5 110 66.4
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 1.3e-36 156.4 113 69.0
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 1.3e-36 156.4 111 71.2
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 1.7e-36 156.0 112 67.0
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 2.2e-36 155.6 77 88.3
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 2.2e-36 155.6 112 69.6
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 2.9e-36 155.2 113 68.1
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 2.9e-36 155.2 112 68.8
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 2.9e-36 155.2 112 68.8
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 6.4e-36 154.1 111 64.9
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 8.4e-36 153.7 103 69.9
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 1.1e-35 153.3 115 66.1
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 1.4e-35 152.9 111 67.6
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 2.4e-35 152.1 115 63.5
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 7.1e-35 150.6 114 63.2
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 9.3e-35 150.2 120 60.8
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 2.7e-34 148.7 93 73.1
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 3.5e-34 148.3 118 60.2
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 3.5e-34 148.3 111 65.8
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 7.9e-34 147.1 110 64.5
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 7.9e-34 147.1 126 58.7
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 7.9e-34 147.1 112 63.4
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 1.8e-33 146.0 109 64.2
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 3.0e-33 145.2 111 62.2
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 3.9e-33 144.8 75 82.7
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 6.7e-33 144.1 110 63.6
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 1.5e-32 142.9 110 62.7
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 1.9e-32 142.5 107 67.3
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 1.6e-31 139.4 112 60.7
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 2.1e-31 139.0 108 63.9
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 1.8e-30 136.0 66 90.9
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 1.8e-30 136.0 166 47.0
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 5.3e-30 134.4 66 89.4
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 1.2e-29 133.3 99 64.6
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 1.3e-28 129.8 64 89.1
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.7e-28 129.4 65 89.2
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 3.2e-27 125.2 74 70.3
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 7.1e-27 124.0 72 72.2
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 2.7e-26 122.1 95 60.0
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 3.5e-26 121.7 81 65.4
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 6.0e-26 120.9 77 71.4
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 3.0e-25 118.6 67 83.6
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 3.9e-25 118.2 62 83.9
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.9e-24 115.9 105 59.0
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 1.3e-17 93.2 84 52.4
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.1e-16 90.1 72 63.9
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 2.8e-15 85.5 86 52.3
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 1.2e-13 80.1 75 54.7
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 1.2e-13 80.1 70 60.0
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 1.5e-13 79.7 77 57.1
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 5.1e-09 64.7 35 74.3


User provided reference genes

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