Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G11830 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 1.0e-42 176.4 92 100.0
A03p32970 Brassica napus HOM05D004326 ORTHO05D004570 4.0e-15 84.7 47 93.6
BolC3t16276H Brassica oleracea HOM05D004326 ORTHO05D004570 4.0e-15 84.7 47 93.6
AT3G02493 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 1.3e-13 79.7 47 93.6
CARHR076480 Cardamine hirsuta HOM05D004326 ORTHO05D004570 2.8e-13 78.6 47 91.5
C03p40100 Brassica napus HOM05D004326 ORTHO05D004570 1.4e-12 76.3 42 92.9
BraA03t12465Z Brassica rapa HOM05D004326 ORTHO05D004570 1.4e-12 76.3 42 92.9
Carub.0003s0160 Capsella rubella HOM05D004326 ORTHO05D004570 1.6e-11 72.8 48 87.5
Thhalv10015386m.g Eutrema salsugineum HOM05D004326 ORTHO05D004570 1.3e-10 69.7 50 68.0
CARHR197290 Cardamine hirsuta HOM05D004326 ORTHO05D004570 1.1e-09 66.6 51 70.6
AL6G26900 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 5.6e-09 64.3 52 71.2
AT5G16023 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 1.6e-08 62.8 52 69.2
C02p08120 Brassica napus HOM05D004326 ORTHO05D004570 1.6e-08 62.8 51 68.6
A10p23030 Brassica napus HOM05D004326 ORTHO05D004570 3.6e-08 61.6 51 62.7
BolC2t06734H Brassica oleracea HOM05D004326 ORTHO05D004570 3.6e-08 61.6 51 66.7
BolC9t58947H Brassica oleracea HOM05D004326 ORTHO05D004570 3.6e-08 61.6 51 62.7
BraA10t44372Z Brassica rapa HOM05D004326 ORTHO05D004570 3.6e-08 61.6 51 62.7
Carub.0006s1421 Capsella rubella HOM05D004326 ORTHO05D004570 3.6e-08 61.6 51 62.7
THA.LOC109116378 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 3.6e-08 61.6 37 83.8
A02p03350 Brassica napus HOM05D004326 ORTHO05D004570 2.3e-07 58.9 38 76.3
BraA02t05306Z Brassica rapa HOM05D004326 ORTHO05D004570 2.3e-07 58.9 38 76.3
THA.LOC109116985 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 2.3e-07 58.9 37 81.1
C03p08740 Brassica napus HOM05D004326 ORTHO05D004570 6.8e-07 57.4 45 73.3
BolC3t13372H Brassica oleracea HOM05D004326 ORTHO05D004570 6.8e-07 57.4 45 73.3
A03p07530 Brassica napus HOM05D004326 ORTHO05D004570 8.9e-07 57.0 51 58.8
BraA03t10081Z Brassica rapa HOM05D004326 ORTHO05D004570 8.9e-07 57.0 51 58.8
Phvul.008G020301 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 2.0e-06 55.8 41 70.7
Glyma.18G280800 Glycine max HOM05D004326 ORTHO05D004570 3.4e-06 55.1 41 70.7
CANSAT64G0444 Cannabis sativa HOM05D004326 ORTHO05D004570 4.4e-06 54.7 50 52.0
Glyma.08G256500 Glycine max HOM05D004326 ORTHO05D004570 4.4e-06 54.7 41 70.7
Solyc02g065570.1 Solanum lycopersicum HOM05D004326 ORTHO05D004570 4.4e-06 54.7 36 72.2
Migut.K00857 Erythranthe guttata HOM05D004326 ORTHO05D004570 5.7e-06 54.3 40 65.0
THA.LOC109117262 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 7.5e-06 53.9 47 66.0
CAN.G93.32 Capsicum annuum HOM05D004326 ORTHO05D004570 9.8e-06 53.5 36 69.4


User provided reference genes

Program Settings