Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G11690 Arabidopsis lyrata HOM05D004833 ORTHO05D005671 0.0e+00 1200.3 649 100.0
Carub.0003s0149 Capsella rubella HOM05D004833 ORTHO05D005671 6.4e-261 904.0 656 78.0
AT3G02400 Arabidopsis thaliana HOM05D004833 ORTHO05D005671 1.0e-194 684.1 669 62.2
CARHR076370 Cardamine hirsuta HOM05D004833 ORTHO05D005671 3.0e-173 612.8 667 58.8
Sp3g01440 Schrenkiella parvula HOM05D004833 ORTHO05D005671 1.6e-131 474.2 651 48.8
Aa31LG8G9600 Aethionema arabicum HOM05D004833 ORTHO05D005671 4.4e-100 369.8 700 42.0
Thhalv10020728m.g Eutrema salsugineum HOM05D004833 ORTHO05D005671 5.0e-96 356.3 654 42.2
BcaC09g47698 Brassica carinata HOM05D004833 ORTHO05D005671 9.4e-95 352.1 647 43.7
BolC1t05907H Brassica oleracea HOM05D004833 ORTHO05D005671 1.0e-93 348.6 648 44.0
BraA05t23142Z Brassica rapa HOM05D004833 ORTHO05D005671 2.2e-91 340.9 652 42.5
BcaB04g21413 Brassica carinata HOM05D004833 ORTHO05D005671 2.8e-91 340.5 652 40.3
BraSC141t45625Z Brassica rapa HOM05D004833 ORTHO05D005671 4.8e-91 339.7 648 42.7
BNapus_Darmor_BZH_scaffold_208p00080 Brassica napus HOM05D004833 ORTHO05D005671 2.1e-86 324.3 649 41.6
BcaC01g04448 Brassica carinata HOM05D004833 ORTHO05D005671 1.0e-85 322.0 655 42.3
BcaC05g30352 Brassica carinata HOM05D004833 ORTHO05D005671 1.2e-76 292.0 320 57.2
C09p75700 Brassica napus HOM05D004833 ORTHO05D005671 1.5e-76 291.6 320 57.2
BcaC01g04551 Brassica carinata HOM05D004833 ORTHO05D005671 2.6e-76 290.8 645 40.3
C03p40050 Brassica napus HOM05D005209 ORTHO05D006188 6.6e-72 276.2 655 38.9
BolC3t16270H Brassica oleracea HOM05D005209 ORTHO05D006188 6.6e-72 276.2 655 38.9
A05p45200 Brassica napus HOM05D004833 ORTHO05D005671 7.3e-71 272.7 400 47.8
THA.LOC104808605 Tarenaya hassleriana HOM05D004833 ORTHO05D005671 4.4e-68 263.5 688 33.4
A03p32920 Brassica napus HOM05D004833 ORTHO05D005671 8.3e-67 259.2 663 39.1
BraA03t12461Z Brassica rapa HOM05D005209 ORTHO05D006188 1.8e-66 258.1 658 38.1
AT4G14490 Arabidopsis thaliana HOM05D004833 ORTHO05D005671 1.1e-63 248.8 372 47.8
AL7G41650 Arabidopsis lyrata HOM05D004833 ORTHO05D005671 4.3e-55 220.3 364 43.4
Carub.0007s2773 Capsella rubella HOM05D004833 ORTHO05D005671 4.9e-51 206.8 376 43.6
Aa31LG9G2800 Aethionema arabicum HOM05D004833 ORTHO05D005671 7.6e-44 183.0 159 59.7
BolC5t35084H Brassica oleracea HOM05D004833 ORTHO05D005671 1.1e-31 142.5 114 64.9
Cpa.g.sc44.108 Carica papaya HOM05D004833 ORTHO05D005671 5.6e-31 140.2 308 37.0
Glyma.07G201900 Glycine max HOM05D004833 ORTHO05D005671 6.2e-30 136.7 289 36.3
Psat7g116640 Pisum sativum HOM05D004833 ORTHO05D005671 8.1e-30 136.3 177 41.2
Potri.010G074900 Populus trichocarpa HOM05D004833 ORTHO05D005671 8.1e-30 136.3 304 35.9
RcHm_v2.0_Chr7g0211851 Rosa chinensis HOM05D004833 ORTHO05D005671 3.1e-29 134.4 237 40.9
Medtr8g069140 Medicago truncatula HOM05D004833 ORTHO05D005671 1.2e-28 132.5 142 48.6
Medtr4g088235 Medicago truncatula HOM05D004833 ORTHO05D005671 2.0e-28 131.7 141 48.9
QL04p071625 Quercus lobata HOM05D004833 ORTHO05D005671 2.6e-28 131.3 161 47.8
QL06p016027 Quercus lobata HOM05D004833 ORTHO05D005671 4.5e-28 130.6 377 34.2
FAN12G1135 Fragaria x ananassa HOM05D004833 ORTHO05D005671 7.6e-28 129.8 278 36.0
FAN12G1996 Fragaria x ananassa HOM05D004833 ORTHO05D005671 7.6e-28 129.8 278 36.0
Prupe.1G033600 Prunus persica HOM05D004833 ORTHO05D005671 7.6e-28 129.8 131 51.9
FAN17G0464 Fragaria x ananassa HOM05D004833 ORTHO05D005671 9.9e-28 129.4 284 37.7
DCAR_024234 Daucus carota HOM05D004833 ORTHO05D005671 4.9e-27 127.1 144 49.3
MD16G1211500 Malus domestica HOM05D004833 ORTHO05D005671 4.9e-27 127.1 241 37.3
CiPaw.02G115600 Carya illinoinensis HOM05D004833 ORTHO05D005671 1.4e-26 125.6 136 51.5
DCAR_028835 Daucus carota HOM05D004833 ORTHO05D005671 4.2e-26 124.0 149 47.0
Duzib212G0317 Durio zibethinus HOM05D004833 ORTHO05D005671 4.2e-26 124.0 266 36.8
Lj4g0009172 Lotus japonicus HOM05D004833 ORTHO05D005671 7.1e-26 123.2 106 53.8
Ca_18598_v3 Cicer arietinum L. HOM05D004833 ORTHO05D005671 9.3e-26 122.9 145 50.3
Lalb_Chr05g0218581 Lupinus albus HOM05D004833 ORTHO05D005671 1.2e-25 122.5 102 57.8
RcHm_v2.0_Chr7g0224291 Rosa chinensis HOM05D004833 ORTHO05D005671 1.2e-25 122.5 264 35.6
Sabra10G0033900 Salix brachista HOM05D004833 ORTHO05D005671 1.6e-25 122.1 297 33.7
VMungo0251G0345 Vigna mungo HOM05D004833 ORTHO05D005671 1.6e-25 122.1 403 30.5
Phvul.002G328500 Phaseolus vulgaris HOM05D004833 ORTHO05D005671 2.1e-25 121.7 277 31.0
Cfa008364 Carpinus fangiana HOM05D004833 ORTHO05D005671 2.7e-25 121.3 655 29.2
TPR.G14924 Trifolium pratense HOM05D004833 ORTHO05D005671 2.7e-25 121.3 208 38.9
CAN.G1178.27 Capsicum annuum HOM05D004833 ORTHO05D005671 4.6e-25 120.6 162 47.5
EL10Ac7g16793 Beta vulgaris HOM05D004833 ORTHO05D005671 6.0e-25 120.2 102 60.8
FAN17G0043 Fragaria x ananassa HOM05D004833 ORTHO05D005671 6.0e-25 120.2 427 30.9
CANSAT78G0301 Cannabis sativa HOM05D004833 ORTHO05D005671 7.9e-25 119.8 318 33.6
Duzib151G1051 Durio zibethinus HOM05D004833 ORTHO05D005671 7.9e-25 119.8 102 56.9
Sed0021810 Sechium edule HOM05D004833 ORTHO05D005671 7.9e-25 119.8 156 46.8
Manes.03G168000 Manihot esculenta HOM05D004833 ORTHO05D005671 1.3e-24 119.0 334 32.6
PGSC0003DMG400004768 Solanum tuberosum HOM05D004833 ORTHO05D005671 1.3e-24 119.0 209 41.1
Nitab4.5_0002289g0040 Nicotiana tabacum HOM05D004833 ORTHO05D005671 1.8e-24 118.6 217 40.1
CSS0034891 Camellia sinensis var. sinensis HOM05D004833 ORTHO05D005671 3.0e-24 117.9 97 59.8
Gohir.A02G036200 Gossypium hirsutum HOM05D004833 ORTHO05D005671 6.7e-24 116.7 222 38.3
Atru.chr4.2164 Acer truncatum HOM05D004833 ORTHO05D005671 8.7e-24 116.3 120 51.7
Sopen08g026960 Solanum pennellii HOM05D004833 ORTHO05D005671 8.7e-24 116.3 210 40.0
Thecc.04G248100 Theobroma cacao HOM05D004833 ORTHO05D005671 8.7e-24 116.3 420 29.5
TWI09G0514 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 8.7e-24 116.3 223 39.0
TWI53G1508 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 8.7e-24 116.3 228 39.0
TWI53G1633 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 8.7e-24 116.3 228 39.0
MD13G1205500 Malus domestica HOM05D004833 ORTHO05D005671 1.1e-23 115.9 152 44.1
Peaxi162Scf00209g00118 Petunia axillaris HOM05D004833 ORTHO05D005671 1.5e-23 115.5 202 38.1
RcHm_v2.0_Chr4g0391131 Rosa chinensis HOM05D004833 ORTHO05D005671 1.5e-23 115.5 283 36.7
COL.COLO4_15806 Corchorus olitorius HOM05D004833 ORTHO05D005671 1.9e-23 115.2 277 35.0
Ciclev10005174m.g Citrus clementina HOM05D004833 ORTHO05D005671 2.5e-23 114.8 317 33.1
Gorai.005G047200 Gossypium raimondii HOM05D004833 ORTHO05D005671 2.5e-23 114.8 242 36.0
Gohir.D02G042900 Gossypium hirsutum HOM05D004833 ORTHO05D005671 4.3e-23 114.0 282 33.0
Solyc08g078470.4 Solanum lycopersicum HOM05D004833 ORTHO05D005671 1.3e-22 112.5 238 35.3
Nitab4.5_0001381g0160 Nicotiana tabacum HOM05D004833 ORTHO05D005671 2.1e-22 111.7 233 36.1
Glyma.13G174400 Glycine max HOM05D004833 ORTHO05D005671 2.8e-22 111.3 383 29.8
Ah.15g090410 Amaranthus hybridus HOM05D004833 ORTHO05D005671 3.7e-22 110.9 129 46.5
ClCG05G004520 Citrullus lanatus HOM05D004833 ORTHO05D005671 3.7e-22 110.9 104 55.8
HPP92_002726 Vanilla planifolia HOM05D004833 ORTHO05D005671 4.8e-22 110.5 153 41.8
arahy.Tifrunner.gnm1.ann1.CY5RP0 Arachis hypogaea HOM05D004833 ORTHO05D005671 8.1e-22 109.8 436 30.5
arahy.Tifrunner.gnm1.ann1.DI6KST Arachis hypogaea HOM05D004833 ORTHO05D005671 1.4e-21 109.0 647 25.7
Lj4g0026393 Lotus japonicus HOM05D004833 ORTHO05D005671 1.8e-21 108.6 225 36.4
Eucgr.G02729 Eucalyptus grandis HOM05D004833 ORTHO05D005671 4.0e-21 107.5 128 47.7
CANSAT25G0083 Cannabis sativa HOM05D004833 ORTHO05D005671 5.3e-21 107.1 233 33.5
Dinv29897 Davidia involucrata HOM05D004833 ORTHO05D005671 5.3e-21 107.1 263 35.7
HanXRQChr05g0145861 Helianthus annuus HOM05D004833 ORTHO05D005671 9.0e-21 106.3 122 49.2
HanXRQChr11g0331421 Helianthus annuus HOM05D004833 ORTHO05D005671 9.0e-21 106.3 122 49.2
TAR633G1100 Trochodendron aralioides HOM05D004833 ORTHO05D005671 9.0e-21 106.3 165 40.0
FvH4_4g02980 Fragaria vesca HOM05D004833 ORTHO05D005671 1.5e-20 105.5 651 26.0
Lj6P658T33 Lonicera japonica HOM05D004833 ORTHO05D005671 2.0e-20 105.1 260 33.8
unitig_52.g17411 Utricularia gibba HOM05D004833 ORTHO05D005671 2.0e-20 105.1 326 34.0
HPP92_002667 Vanilla planifolia HOM05D004833 ORTHO05D005671 2.6e-20 104.8 229 33.2
Medtr4g088240 Medicago truncatula HOM05D004833 ORTHO05D005671 3.4e-20 104.4 206 36.9
ECA232G1138 Erigeron canadensis HOM05D004833 ORTHO05D005671 4.5e-20 104.0 159 40.9
ECA232G0897 Erigeron canadensis HOM05D004833 ORTHO05D005671 5.8e-20 103.6 133 40.6
ECA234G1378 Erigeron canadensis HOM05D000038 ORTHO05D000423 5.8e-20 103.6 158 40.5
Lsat_1_v5_gn_4_144160 Lactuca sativa HOM05D004833 ORTHO05D005671 7.6e-20 103.2 261 33.7
TAR362G1060 Trochodendron aralioides HOM05D004833 ORTHO05D005671 1.7e-19 102.1 97 52.6
Hma1.2p1_0310F.1_g120780 Hydrangea macrophylla HOM05D004833 ORTHO05D005671 2.2e-19 101.7 230 36.5
SalBow3G2302 Salvia bowleyana HOM05D004833 ORTHO05D005671 2.9e-19 101.3 239 33.5
CsaV3_3G012480 Cucumis sativus L. HOM05D004833 ORTHO05D005671 3.8e-19 100.9 385 31.9
FAN28G1505 Fragaria x ananassa HOM05D004833 ORTHO05D005671 8.4e-19 99.8 648 25.2
MELO3C006459.2 Cucumis melo HOM05D004833 ORTHO05D005671 1.1e-18 99.4 394 31.2
HanXRQChr09g0257341 Helianthus annuus HOM05D004833 ORTHO05D005671 1.4e-18 99.0 265 33.2
Nn4g25548 Nelumbo nucifera HOM05D004833 ORTHO05D005671 1.9e-18 98.6 341 28.4
Ciclev10004978m.g Citrus clementina HOM05D004833 ORTHO05D005671 4.2e-18 97.4 418 28.9
Rhsim11G0181500 Rhododendron simsii HOM05D004833 ORTHO05D005671 7.1e-18 96.7 356 27.8
Aqoxy4G02560 Aquilegia oxysepala HOM05D004833 ORTHO05D005671 9.3e-18 96.3 243 33.3
SHI08746 Sapria himalayana HOM05D004833 ORTHO05D005671 9.3e-18 96.3 316 30.1
BcaC08g43040 Brassica carinata HOM05D010442 ORTHO05D010690 1.6e-17 95.5 126 42.9
Oeu002595.1 Olea europaea HOM05D004833 ORTHO05D005671 2.1e-17 95.1 312 32.7
Actinidia40079 Actinidia chinensis HOM05D004833 ORTHO05D005671 2.7e-17 94.7 403 29.5
MSTRG.24695 Avicennia marina HOM05D004833 ORTHO05D005671 4.6e-17 94.0 389 28.5
Os03g0728500 Oryza sativa ssp. japonica HOM05D004833 ORTHO05D005671 6.0e-17 93.6 128 38.3
PGR004G1107 Punica granatum HOM05D004833 ORTHO05D005671 6.0e-17 93.6 649 25.4
ATR0693G179 Amborella trichopoda HOM05D004833 ORTHO05D005671 7.9e-17 93.2 131 41.2
BolC6t35423H Brassica oleracea HOM05D010442 ORTHO05D010690 7.9e-17 93.2 128 43.0
Migut.N00255 Erythranthe guttata HOM05D004833 ORTHO05D005671 7.9e-17 93.2 416 28.1
Rhsim04G0155000 Rhododendron simsii HOM05D004833 ORTHO05D005671 1.3e-16 92.4 360 26.7
Sc25g0004110 Simmondsia chinensis HOM05D004833 ORTHO05D005671 1.8e-16 92.0 484 29.8
SGA_v2.0_scaffold308G48094 Striga asiatica HOM05D004833 ORTHO05D005671 1.8e-16 92.0 263 36.5
MBI19_g03257_MAGBIO Magnolia biondii HOM05D004833 ORTHO05D005671 3.0e-16 91.3 349 27.8
C06p03000 Brassica napus HOM05D010442 ORTHO05D010690 5.1e-16 90.5 179 37.4
CDE09G0593 Ceratophyllum demersum HOM05D004833 ORTHO05D005671 6.7e-16 90.1 361 27.1
HPP92_014115 Vanilla planifolia HOM05D004833 ORTHO05D005671 2.1e-14 85.1 352 27.6
Zm00001eb056120 Zea mays HOM05D004833 ORTHO05D005671 9.0e-13 79.7 137 35.0
A06p04460 Brassica napus HOM05D010442 ORTHO05D010690 1.5e-12 79.0 181 36.5
unitig_899.g14712 Utricularia gibba HOM05D004833 ORTHO05D005671 2.6e-12 78.2 420 27.1
Zm00001eb215540 Zea mays HOM05D004833 ORTHO05D005671 2.6e-12 78.2 154 31.8
SEGI_17679 Sequoiadendron giganteum HOM05D004833 ORTHO05D005671 1.3e-11 75.9 98 41.8
Medtr3g092440 Medicago truncatula HOM05D004833 ORTHO05D005671 1.1e-10 72.8 115 41.7
PSO210G7662 Papaver somniferum HOM05D004833 ORTHO05D005671 4.2e-10 70.9 379 26.1
Pp3c19_11080 Physcomitrium patens HOM05D004833 ORTHO05D005671 7.9e-09 66.6 112 33.9
Phvul.002G234300 Phaseolus vulgaris HOM05D004833 ORTHO05D005671 1.3e-08 65.9 49 59.2
AagrBONN_evm.TU.Sc2ySwM_368.3218 Anthoceros agrestis HOM05D004833 ORTHO05D005671 8.7e-08 63.2 95 36.8
BcaB07g33758 Brassica carinata HOM05D010442 ORTHO05D010690 1.1e-07 62.8 183 31.1
Pp3c18_4140 Physcomitrium patens HOM05D004833 ORTHO05D005671 1.5e-07 62.4 97 39.2
SalBow5G1669 Salvia bowleyana HOM05D004938 ORTHO05D006035 1.9e-07 62.0 151 31.8
SalBow5G2418 Salvia bowleyana HOM05D004938 ORTHO05D006035 1.9e-07 62.0 151 31.8
ClCG06G005970 Citrullus lanatus HOM05D004938 ORTHO05D006035 4.3e-07 60.8 145 34.5
Lj1g0006253 Lotus japonicus HOM05D004938 ORTHO05D006035 5.7e-07 60.5 129 34.9
Potri.008G149700 Populus trichocarpa HOM05D004938 ORTHO05D006035 5.7e-07 60.5 145 33.8
Psat4g211200 Pisum sativum HOM05D004938 ORTHO05D006035 7.4e-07 60.1 150 32.7
Sabra10G0051800 Salix brachista HOM05D004938 ORTHO05D006035 9.7e-07 59.7 145 33.8
TPR.G38053 Trifolium pratense HOM05D004938 ORTHO05D006035 9.7e-07 59.7 148 33.8
TWI73G0197 Tripterygium wilfordii HOM05D004938 ORTHO05D006035 9.7e-07 59.7 145 33.8
CDE02G0054 Ceratophyllum demersum HOM05D004833 ORTHO05D005671 1.3e-06 59.3 378 23.0
Lj6C597G4 Lonicera japonica HOM05D000104 ORTHO05D006391 1.3e-06 59.3 145 32.4
PSO761G0588 Papaver somniferum HOM05D004833 ORTHO05D005671 1.3e-06 59.3 471 28.0
Glyma.01G239700 Glycine max HOM05D004938 ORTHO05D006035 1.6e-06 58.9 127 34.6
Actinidia04469 Actinidia chinensis HOM05D004833 ORTHO05D005671 2.1e-06 58.5 41 63.4
Ca_24383_v3 Cicer arietinum L. HOM05D004938 ORTHO05D006035 2.1e-06 58.5 150 32.7
GSVIVG01017919001 Vitis vinifera HOM05D004938 ORTHO05D006035 2.1e-06 58.5 145 33.1
CiPaw.02G094500 Carya illinoinensis HOM05D004938 ORTHO05D006035 3.7e-06 57.8 145 33.1
MELO3C014494.2 Cucumis melo HOM05D004938 ORTHO05D006035 3.7e-06 57.8 145 33.1
Potri.010G091500 Populus trichocarpa HOM05D004938 ORTHO05D006035 3.7e-06 57.8 142 32.4
Eucgr.H03562 Eucalyptus grandis HOM05D004938 ORTHO05D006035 4.8e-06 57.4 127 33.1
PRCOL_00002026 Prasinoderma coloniale HOM05D004833 ORTHO05D005671 4.8e-06 57.4 96 34.4
Atru.chr4.2523 Acer truncatum HOM05D004938 ORTHO05D006035 6.3e-06 57.0 152 34.9
arahy.Tifrunner.gnm1.ann1.AAS7XX Arachis hypogaea HOM05D004938 ORTHO05D006035 6.3e-06 57.0 150 33.3
arahy.Tifrunner.gnm1.ann1.CBXD69 Arachis hypogaea HOM05D004938 ORTHO05D006035 6.3e-06 57.0 150 33.3
DCAR_030617 Daucus carota HOM05D004938 ORTHO05D006035 6.3e-06 57.0 145 31.7
Manes.15G025800 Manihot esculenta HOM05D004938 ORTHO05D006035 6.3e-06 57.0 145 31.7
Mapoly0067s0089 Marchantia polymorpha HOM05D004833 ORTHO05D005671 6.3e-06 57.0 95 33.7
Sed0014933 Sechium edule HOM05D004938 ORTHO05D006035 6.3e-06 57.0 106 34.0
Duzib212G0302 Durio zibethinus HOM05D004938 ORTHO05D006035 8.2e-06 56.6 115 35.7
Migut.N00168 Erythranthe guttata HOM05D004938 ORTHO05D006035 8.2e-06 56.6 151 32.5
Phvul.002G047600 Phaseolus vulgaris HOM05D004938 ORTHO05D006035 8.2e-06 56.6 149 32.2


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