Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 1.2e-120 436.4 213 100.0
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 1.3e-117 426.4 213 98.1
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 1.0e-114 416.8 213 94.8
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 2.6e-110 402.1 213 93.0
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 6.4e-109 397.5 212 91.5
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 9.6e-105 383.6 218 85.8
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 1.3e-104 383.3 218 86.2
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 1.3e-104 383.3 218 86.2
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 1.3e-104 383.3 218 86.2
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 2.8e-104 382.1 217 86.6
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 1.4e-103 379.8 218 85.8
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 9.0e-103 377.1 218 85.3
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 4.6e-99 364.8 216 83.8
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 1.7e-93 346.3 216 76.4
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 6.5e-77 291.2 218 65.6
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 5.5e-76 288.1 217 65.9
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 3.0e-74 282.3 220 61.4
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 3.9e-74 282.0 220 61.4
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 8.7e-74 280.8 220 61.8
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 1.9e-73 279.6 222 64.0
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 1.9e-73 279.6 220 60.9
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 5.7e-73 278.1 167 76.0
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 2.2e-72 276.2 218 61.5
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 8.2e-72 274.2 217 61.3
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 3.1e-71 272.3 207 62.8
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 1.5e-70 270.0 164 72.0
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 2.6e-70 269.2 208 62.0
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 5.9e-70 268.1 219 62.1
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 5.0e-69 265.0 242 54.1
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 1.4e-68 263.5 169 70.4
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 4.2e-68 261.9 168 71.4
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 4.2e-68 261.9 168 71.4
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 4.2e-68 261.9 168 70.8
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 9.4e-68 260.8 161 71.4
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 9.4e-68 260.8 167 71.9
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 1.2e-67 260.4 169 69.2
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 1.6e-67 260.0 178 68.5
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 2.1e-67 259.6 164 72.6
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 2.7e-67 259.2 223 57.8
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 6.1e-67 258.1 168 71.4
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 1.4e-66 256.9 225 57.8
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 2.3e-66 256.1 209 58.9
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 2.3e-66 256.1 215 58.6
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 1.1e-65 253.8 212 58.0
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 3.3e-65 252.3 221 58.8
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 4.3e-65 251.9 164 68.9
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 5.7e-65 251.5 213 55.4
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 1.3e-64 250.4 217 55.3
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 1.7e-64 250.0 210 58.1
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.7e-64 250.0 201 59.7
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.7e-64 250.0 201 59.7
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 1.7e-64 250.0 218 56.9
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 2.8e-64 249.2 217 55.3
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 2.8e-64 249.2 214 56.1
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 3.7e-64 248.8 221 56.6
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 8.2e-64 247.7 199 60.3
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 3.1e-63 245.7 217 55.8
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 4.1e-63 245.4 218 57.3
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 5.3e-63 245.0 164 66.5
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 9.1e-63 244.2 219 56.6
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 1.5e-62 243.4 172 64.5
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 4.5e-62 241.9 213 54.5
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 5.9e-62 241.5 215 55.8
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 1.0e-61 240.7 166 68.7
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.0e-61 240.7 164 65.2
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 1.3e-61 240.4 226 54.4
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 5.0e-61 238.4 210 56.2
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 6.5e-61 238.0 164 65.2
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 1.1e-60 237.3 214 52.8
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 1.1e-60 237.3 215 54.9
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 1.4e-60 236.9 172 62.2
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 2.5e-60 236.1 213 54.0
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 5.5e-60 235.0 174 63.8
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 7.2e-60 234.6 213 54.0
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 3.6e-59 232.3 214 52.8
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 2.3e-58 229.6 209 53.6
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 2.3e-58 229.6 164 62.8
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 3.7e-56 222.2 146 70.5
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 2.2e-53 213.0 172 57.6
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 1.5e-52 210.3 174 53.4
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 5.5e-52 208.4 176 58.0
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 6.1e-51 204.9 268 42.9
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 6.7e-50 201.4 174 56.3
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 8.8e-50 201.1 175 54.3
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 5.7e-49 198.4 125 69.6
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 3.8e-45 185.7 160 52.5
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 2.5e-44 183.0 166 54.8
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 7.2e-44 181.4 105 75.2
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 2.1e-43 179.9 105 75.2
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 1.3e-40 170.6 119 68.1
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 4.1e-39 165.6 110 67.3
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 2.7e-38 162.9 119 69.7
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.3e-37 160.6 163 49.7
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 2.7e-35 152.9 216 42.6
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 6.1e-35 151.8 198 42.9
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 2.3e-26 123.2 123 49.6
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 4.0e-26 122.5 80 68.8
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 1.3e-21 107.5 151 43.7
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 1.1e-20 104.4 119 46.2
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 8.0e-19 98.2 154 37.0
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 1.8e-18 97.1 131 42.0
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 3.2e-15 86.3 146 37.0
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 2.5e-12 76.6 41 78.0
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 1.6e-11 73.9 145 33.8


User provided reference genes

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