Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL365U10020 Arabidopsis lyrata HOM05D002866 ORTHO05D008929 2.6e-32 141.4 67 100.0
AL8G38240 Arabidopsis lyrata HOM05D002866 ORTHO05D008929 2.6e-32 141.4 67 100.0
AT5G61540 Arabidopsis thaliana HOM05D002866 ORTHO05D008929 1.1e-30 136.0 67 95.5
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 1.1e-30 136.0 67 94.0
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 1.1e-30 136.0 67 94.0
CARHR275310 Cardamine hirsuta HOM05D002866 ORTHO05D008929 2.4e-30 134.8 67 95.5
Carub.0008s2223 Capsella rubella HOM05D002866 ORTHO05D008929 4.2e-30 134.0 67 94.0
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 7.1e-30 133.3 67 91.0
BraA03t13840Z Brassica rapa HOM05D002866 ORTHO05D008929 7.1e-30 133.3 67 91.0
Thhalv10004474m.g Eutrema salsugineum HOM05D002866 ORTHO05D008929 2.1e-29 131.7 67 92.5
THA.LOC104818311 Tarenaya hassleriana HOM05D002866 ORTHO05D008929 6.6e-28 126.7 66 87.9
Sp2g24740 Schrenkiella parvula HOM05D002866 ORTHO05D008929 1.9e-27 125.2 67 89.6
Thecc.03G150200 Theobroma cacao HOM05D002866 ORTHO05D008929 3.3e-27 124.4 67 85.1
Atru.chr1.858_Atru.chr1.859 Acer truncatum HOM05D002866 ORTHO05D008929 4.3e-27 124.0 67 85.1
COL.COLO4_14062 Corchorus olitorius HOM05D002866 ORTHO05D008929 9.6e-27 122.9 67 82.1
Gohir.A12G197100 Gossypium hirsutum HOM05D002866 ORTHO05D008929 9.6e-27 122.9 67 83.6
Gohir.D12G199700 Gossypium hirsutum HOM05D002866 ORTHO05D008929 9.6e-27 122.9 67 83.6
Gorai.008G214900 Gossypium raimondii HOM05D002866 ORTHO05D008929 9.6e-27 122.9 67 83.6
Ciclev10005302m.g Citrus clementina HOM05D002866 ORTHO05D008929 3.6e-26 120.9 67 82.1
RcHm_v2.0_Chr1g0373871 Rosa chinensis HOM05D002866 ORTHO05D008929 4.8e-26 120.6 67 82.1
Cfa013559 Carpinus fangiana HOM05D002866 ORTHO05D008929 6.2e-26 120.2 67 82.1
Cpa.g.sc13.272 Carica papaya HOM05D002866 ORTHO05D008929 1.1e-25 119.4 67 80.6
FvH4_7g27050 Fragaria vesca HOM05D002866 ORTHO05D008929 1.1e-25 119.4 67 80.6
FAN06G4646 Fragaria x ananassa HOM05D002866 ORTHO05D008929 1.1e-25 119.4 67 80.6
FAN10G2637 Fragaria x ananassa HOM05D002866 ORTHO05D008929 1.1e-25 119.4 67 80.6
Haze_22179 Corylus avellana HOM05D002866 ORTHO05D000055 1.8e-25 118.6 67 80.6
CSS0005256 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 2.4e-25 118.2 67 82.1
CSS0048324 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 2.4e-25 118.2 67 82.1
vmacro22348 Vaccinium macrocarpon HOM05D002866 ORTHO05D008929 3.1e-25 117.9 67 80.6
Cc02_g04590 Coffea canephora HOM05D002866 ORTHO05D008929 5.3e-25 117.1 67 79.1
TWI14G1303 Tripterygium wilfordii HOM05D002866 ORTHO05D008929 6.9e-25 116.7 67 80.6
QL05p020902 Quercus lobata HOM05D002866 ORTHO05D008929 9.0e-25 116.3 66 78.8
TAR629G2248 Trochodendron aralioides HOM05D002866 ORTHO05D008929 9.0e-25 116.3 67 82.1
CiPaw.07G051200 Carya illinoinensis HOM05D002866 ORTHO05D008929 2.0e-24 115.2 67 77.6
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 2.0e-24 115.2 67 79.1
Aa31LG11G1880 Aethionema arabicum HOM05D002866 ORTHO05D008929 2.6e-24 114.8 64 84.4
Actinidia13601 Actinidia chinensis HOM05D002866 ORTHO05D008929 3.4e-24 114.4 66 77.3
Sabra14G0144000 Salix brachista HOM05D002866 ORTHO05D008929 3.4e-24 114.4 67 79.1
Duzib084G0424 Durio zibethinus HOM05D002866 ORTHO05D008929 4.5e-24 114.0 67 76.1
Manes.06G132400 Manihot esculenta HOM05D002866 ORTHO05D008929 4.5e-24 114.0 67 77.6
SGA_v2.0_scaffold56G19920 Striga asiatica HOM05D002866 ORTHO05D008929 4.5e-24 114.0 67 77.6
Nn6g33860 Nelumbo nucifera HOM05D002866 ORTHO05D008929 5.8e-24 113.6 67 76.1
Prupe.2G273700 Prunus persica HOM05D002866 ORTHO05D008929 5.8e-24 113.6 67 77.6
Rhsim03G0162900 Rhododendron simsii HOM05D002866 ORTHO05D008929 7.6e-24 113.2 67 77.6
GSVIVG01013998001 Vitis vinifera HOM05D002866 ORTHO05D008929 7.6e-24 113.2 67 74.6
CsaV3_4G004140 Cucumis sativus L. HOM05D002866 ORTHO05D008929 9.9e-24 112.8 67 74.6
Migut.F01192 Erythranthe guttata HOM05D002866 ORTHO05D008929 1.3e-23 112.5 66 75.8
QL05p021044 Quercus lobata HOM05D002866 ORTHO05D008929 1.3e-23 112.5 66 77.3
Actinidia24979 Actinidia chinensis HOM05D002866 ORTHO05D008929 1.7e-23 112.1 67 76.1
Aqoxy3G02801 Aquilegia oxysepala HOM05D002866 ORTHO05D008929 1.7e-23 112.1 67 77.6
HanXRQChr14g0461261 Helianthus annuus HOM05D002866 ORTHO05D008929 1.7e-23 112.1 67 76.1
MD07G1250300 Malus domestica HOM05D002866 ORTHO05D008929 1.7e-23 112.1 67 76.1
unitig_60.g25662 Utricularia gibba HOM05D002866 ORTHO05D008929 1.7e-23 112.1 66 74.2
MBI04_g34103_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008929 2.2e-23 111.7 67 77.6
Potri.014G191900 Populus trichocarpa HOM05D002866 ORTHO05D008929 2.2e-23 111.7 67 79.1
Dinv06583 Davidia involucrata HOM05D002866 ORTHO05D008929 2.9e-23 111.3 67 76.1
FAN03G0702 Fragaria x ananassa HOM05D002866 ORTHO05D008929 3.8e-23 110.9 67 76.1
Oeu021694.1 Olea europaea HOM05D002866 ORTHO05D008929 3.8e-23 110.9 66 72.7
PSO063G6150 Papaver somniferum HOM05D002866 ORTHO05D008929 3.8e-23 110.9 67 74.6
Sc13g0007920 Simmondsia chinensis HOM05D002866 ORTHO05D008929 3.8e-23 110.9 66 75.8
ECA238G1321 Erigeron canadensis HOM05D002866 ORTHO05D008929 4.9e-23 110.5 67 73.1
Phvul.005G009200 Phaseolus vulgaris HOM05D002866 ORTHO05D008929 4.9e-23 110.5 66 72.7
Sed0016729 Sechium edule HOM05D002866 ORTHO05D008929 4.9e-23 110.5 67 71.6
Lsat_1_v5_gn_2_127761 Lactuca sativa HOM05D002866 ORTHO05D008929 6.4e-23 110.2 67 73.1
Psat5g228760 Pisum sativum HOM05D002866 ORTHO05D008929 6.4e-23 110.2 67 74.6
PGR042G0411 Punica granatum HOM05D002866 ORTHO05D008929 6.4e-23 110.2 67 71.6
Sopen03g024270 Solanum pennellii HOM05D002866 ORTHO05D008929 6.4e-23 110.2 66 72.7
GSVIVG01013991001 Vitis vinifera HOM05D002866 ORTHO05D008929 6.4e-23 110.2 67 73.1
Ah.07g207570 Amaranthus hybridus HOM05D002866 ORTHO05D008929 8.4e-23 109.8 66 72.7
Glyma.06G317300 Glycine max HOM05D002866 ORTHO05D008929 8.4e-23 109.8 67 73.1
Hund11850 Selenicereus undatus HOM05D002866 ORTHO05D008929 8.4e-23 109.8 66 74.2
PGSC0003DMG400018851 Solanum tuberosum HOM05D002866 ORTHO05D008929 8.4e-23 109.8 66 72.7
Lj3g0001933 Lotus japonicus HOM05D002866 ORTHO05D008929 1.1e-22 109.4 67 73.1
EL10Ac3g05868 Beta vulgaris HOM05D002866 ORTHO05D008929 1.4e-22 109.0 66 74.2
HPP92_021029 Vanilla planifolia HOM05D002866 ORTHO05D008929 1.4e-22 109.0 67 73.1
HPP92_027439 Vanilla planifolia HOM05D002866 ORTHO05D008929 1.4e-22 109.0 67 74.6
AUR62002233 Chenopodium quinoa HOM05D002866 ORTHO05D008929 1.9e-22 108.6 66 74.2
Lj1A976T81 Lonicera japonica HOM05D002866 ORTHO05D008929 1.9e-22 108.6 65 75.4
Peaxi162Scf00271g00827 Petunia axillaris HOM05D002866 ORTHO05D008929 1.9e-22 108.6 67 73.1
TPR.G12157 Trifolium pratense HOM05D002866 ORTHO05D008929 1.9e-22 108.6 67 73.1
Zm00001eb074820 Zea mays HOM05D002866 ORTHO05D008929 3.2e-22 107.8 67 73.1
CANSAT56G0775 Cannabis sativa HOM05D002866 ORTHO05D008929 4.2e-22 107.5 66 74.2
AUR62015445 Chenopodium quinoa HOM05D002866 ORTHO05D008929 5.4e-22 107.1 66 72.7
Medtr3g008180 Medicago truncatula HOM05D002866 ORTHO05D008929 5.4e-22 107.1 67 73.1
SalBow2G0523 Salvia bowleyana HOM05D002866 ORTHO05D008929 5.4e-22 107.1 66 72.7
CAN.G485.17 Capsicum annuum HOM05D002866 ORTHO05D008929 9.3e-22 106.3 66 71.2
Ca_14047_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008929 9.3e-22 106.3 67 70.1
VMungo1080G1351 Vigna mungo HOM05D002866 ORTHO05D008929 9.3e-22 106.3 67 71.6
Os04g0549300 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008929 3.5e-21 104.4 67 70.1
Solyc03g093440.4 Solanum lycopersicum HOM05D002866 ORTHO05D008929 4.6e-21 104.0 64 70.3
Eucgr.A02913 Eucalyptus grandis HOM05D002866 ORTHO05D008929 1.3e-20 102.4 66 66.7
Nitab4.5_0002346g0020 Nicotiana tabacum HOM05D002866 ORTHO05D008929 2.3e-20 101.7 67 70.1
Hund11848 Selenicereus undatus HOM05D002866 ORTHO05D008929 6.7e-20 100.1 60 75.0
Lalb_Chr15g0079681 Lupinus albus HOM05D002866 ORTHO05D008929 1.5e-19 99.0 67 68.7
Pp3c27_3290 Physcomitrium patens HOM05D002866 ORTHO05D008929 2.5e-19 98.2 66 68.2
CBR_g51802 Chara braunii HOM05D002866 ORTHO05D000301 7.4e-19 96.7 66 63.6
AagrBONN_evm.TU.Sc2ySwM_228.4013 Anthoceros agrestis HOM05D002866 ORTHO05D008929 1.6e-18 95.5 66 65.2
Mapoly0043s0091 Marchantia polymorpha HOM05D002866 ORTHO05D008929 1.6e-18 95.5 66 62.1
SMO115G0123 Selaginella moellendorffii HOM05D002866 ORTHO05D008929 2.1e-18 95.1 66 62.1
Nitab4.5_0001267g0010 Nicotiana tabacum HOM05D002866 ORTHO05D008929 3.6e-18 94.4 60 70.0
GSVIVG01013994001 Vitis vinifera HOM05D002866 ORTHO05D008929 4.0e-17 90.9 54 74.1
FAN01G2533 Fragaria x ananassa HOM05D002866 ORTHO05D008929 2.4e-14 81.6 47 78.7
arahy.Tifrunner.gnm1.ann1.DW86GH Arachis hypogaea HOM05D002866 ORTHO05D008929 1.7e-07 58.9 38 71.1


User provided reference genes

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