Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL343U10010 Arabidopsis lyrata HOM05D007435 ORTHO05D009338 4.2e-69 264.6 138 100.0
AT4G31560 Arabidopsis thaliana HOM05D007435 ORTHO05D009338 7.7e-63 243.8 138 94.2
CARHR239440 Cardamine hirsuta HOM05D007435 ORTHO05D009338 2.2e-54 215.7 136 86.0
Thhalv10026511m.g Eutrema salsugineum HOM05D007435 ORTHO05D009338 2.5e-53 212.2 144 81.9
Carub.0007s0901 Capsella rubella HOM05D007435 ORTHO05D009338 1.2e-52 209.9 141 83.7
Sp7g29390 Schrenkiella parvula HOM05D007435 ORTHO05D009338 1.0e-51 206.8 140 80.7
BcaNung04129 Brassica carinata HOM05D007435 ORTHO05D009338 1.1e-48 196.8 135 80.0
C07p58750 Brassica napus HOM05D007435 ORTHO05D009338 9.1e-48 193.7 138 76.8
BolC7t46323H Brassica oleracea HOM05D007435 ORTHO05D009338 9.1e-48 193.7 138 76.8
A03p60860 Brassica napus HOM05D007435 ORTHO05D009338 2.6e-47 192.2 138 77.5
BraA03t15122Z Brassica rapa HOM05D007435 ORTHO05D009338 2.6e-47 192.2 138 77.5
A01p06670 Brassica napus HOM05D005366 ORTHO05D006323 4.5e-47 191.4 136 77.2
C01p07440 Brassica napus HOM05D007435 ORTHO05D009338 4.5e-47 191.4 138 76.8
BolC1t00726H Brassica oleracea HOM05D007435 ORTHO05D009338 4.5e-47 191.4 138 76.8
BraA01t00625Z Brassica rapa HOM05D005366 ORTHO05D006323 4.5e-47 191.4 136 77.2
BcaNung01514 Brassica carinata HOM05D007435 ORTHO05D009338 7.7e-47 190.7 138 76.1
BcaC09g51937 Brassica carinata HOM05D007435 ORTHO05D009338 8.5e-46 187.2 135 76.3
Aa31LG2G18760 Aethionema arabicum HOM05D007435 ORTHO05D009338 6.1e-44 181.0 143 70.6
THA.LOC104826709 Tarenaya hassleriana HOM05D007435 ORTHO05D009338 3.8e-30 135.2 140 58.6
Cpa.g.sc197.17 Carica papaya HOM05D007435 ORTHO05D009338 4.4e-26 121.7 97 66.0
Thecc.10G004500 Theobroma cacao HOM05D007435 ORTHO05D009338 2.2e-25 119.4 125 55.2
COL.COLO4_19345 Corchorus olitorius HOM05D007435 ORTHO05D009338 1.6e-23 113.2 141 49.6
Duzib114G0226 Durio zibethinus HOM05D007435 ORTHO05D009338 1.1e-21 107.1 155 48.4
MD07G1027000 Malus domestica HOM05D007435 ORTHO05D009338 4.3e-21 105.1 132 49.2
Manes.11G002100 Manihot esculenta HOM05D007435 ORTHO05D009338 4.3e-21 105.1 137 47.4
Gohir.D10G251200 Gossypium hirsutum HOM05D007435 ORTHO05D009338 1.6e-20 103.2 92 60.9
Gorai.011G291600 Gossypium raimondii HOM05D007435 ORTHO05D009338 1.6e-20 103.2 92 60.9
Gohir.A10G239300 Gossypium hirsutum HOM05D007435 ORTHO05D009338 2.8e-20 102.4 93 60.2
Duzib128G0703 Durio zibethinus HOM05D007435 ORTHO05D009338 3.6e-20 102.1 98 57.1
TAR065G0004 Trochodendron aralioides HOM05D007435 ORTHO05D009338 3.6e-20 102.1 121 53.7
Dinv32059 Davidia involucrata HOM05D007435 ORTHO05D009338 8.0e-20 100.9 92 59.8
Prupe.2G027100 Prunus persica HOM05D007435 ORTHO05D009338 8.0e-20 100.9 138 49.3
RcHm_v2.0_Chr1g0319401 Rosa chinensis HOM05D007435 ORTHO05D009338 1.0e-19 100.5 131 49.6
TWI63G0886 Tripterygium wilfordii HOM05D007435 ORTHO05D009338 1.4e-19 100.1 135 45.2
Actinidia21528 Actinidia chinensis HOM05D007435 ORTHO05D009338 2.3e-19 99.4 92 57.6
MD02G1297000 Malus domestica HOM05D007435 ORTHO05D009338 6.8e-19 97.8 110 51.8
Actinidia02252 Actinidia chinensis HOM05D007435 ORTHO05D009338 8.9e-19 97.4 105 53.3
Dinv03572 Davidia involucrata HOM05D007435 ORTHO05D009338 8.9e-19 97.4 93 57.0
Dinv05039 Davidia involucrata HOM05D007435 ORTHO05D009338 8.9e-19 97.4 93 57.0
FAN03G1772 Fragaria x ananassa HOM05D007435 ORTHO05D009338 1.2e-18 97.1 121 49.6
CANSAT80G0490 Cannabis sativa HOM05D007435 ORTHO05D009338 1.5e-18 96.7 150 47.3
AUR62026808 Chenopodium quinoa HOM05D007435 ORTHO05D009338 2.0e-18 96.3 128 45.3
Eucgr.G03266 Eucalyptus grandis HOM05D007435 ORTHO05D009338 2.0e-18 96.3 91 58.2
SalBow6G1324 Salvia bowleyana HOM05D007435 ORTHO05D009338 2.0e-18 96.3 91 56.0
TAR369G0027 Trochodendron aralioides HOM05D007435 ORTHO05D009338 3.4e-18 95.5 101 55.4
FvH4_7g02100 Fragaria vesca HOM05D007435 ORTHO05D009338 4.4e-18 95.1 131 45.0
Rhsim05G0126700 Rhododendron simsii HOM05D007435 ORTHO05D009338 4.4e-18 95.1 118 48.3
Nn7g36439 Nelumbo nucifera HOM05D007435 ORTHO05D009338 5.8e-18 94.7 98 56.1
CiPaw.13G009600 Carya illinoinensis HOM05D007435 ORTHO05D009338 9.8e-18 94.0 139 43.2
unitig_578.g16053 Utricularia gibba HOM05D007435 ORTHO05D009338 2.9e-17 92.4 134 45.5
AUR62037244 Chenopodium quinoa HOM05D007435 ORTHO05D009338 3.7e-17 92.0 125 45.6
Lj3g0014273 Lotus japonicus HOM05D007435 ORTHO05D009338 4.9e-17 91.7 102 51.0
Haze_03106 Corylus avellana HOM05D007435 ORTHO05D009338 6.4e-17 91.3 133 43.6
Ah.10g030920 Amaranthus hybridus HOM05D007435 ORTHO05D009338 1.1e-16 90.5 135 44.4
CSS0019859 Camellia sinensis var. sinensis HOM05D007435 ORTHO05D009338 1.4e-16 90.1 96 49.0
ClCG01G007560 Citrullus lanatus HOM05D007435 ORTHO05D009338 1.9e-16 89.7 133 45.9
DCAR_009211 Daucus carota HOM05D007435 ORTHO05D009338 4.1e-16 88.6 110 46.4
CsaV3_5G024570 Cucumis sativus L. HOM05D007435 ORTHO05D009338 5.4e-16 88.2 132 43.9
Cfa010840 Carpinus fangiana HOM05D007435 ORTHO05D009338 7.0e-16 87.8 134 41.8
Sed0015818 Sechium edule HOM05D007435 ORTHO05D009338 1.2e-15 87.0 133 42.9
Potri.001G022500 Populus trichocarpa HOM05D007435 ORTHO05D009338 1.6e-15 86.7 149 42.3
Sc10g0004150 Simmondsia chinensis HOM05D007435 ORTHO05D009338 1.6e-15 86.7 132 41.7
SGA_v2.0_scaffold354G49740 Striga asiatica HOM05D007435 ORTHO05D009338 1.6e-15 86.7 90 55.6
Migut.N01821 Erythranthe guttata HOM05D007435 ORTHO05D009338 4.6e-15 85.1 96 46.9
Lsat_1_v5_gn_1_100400 Lactuca sativa HOM05D007435 ORTHO05D009338 7.8e-15 84.3 120 45.8
Medtr3g023160 Medicago truncatula HOM05D007435 ORTHO05D009338 7.8e-15 84.3 129 43.4
QL04p012434 Quercus lobata HOM05D007435 ORTHO05D009338 7.8e-15 84.3 140 43.6
PSO339G5565 Papaver somniferum HOM05D007435 ORTHO05D009338 1.0e-14 84.0 92 51.1
QL04p013057 Quercus lobata HOM05D007435 ORTHO05D009338 1.0e-14 84.0 162 40.7
MELO3C005141.2 Cucumis melo HOM05D007435 ORTHO05D009338 3.0e-14 82.4 133 43.6
ATR0006G035 Amborella trichopoda HOM05D007435 ORTHO05D009338 6.6e-14 81.3 124 44.4
Nitab4.5_0001775g0080 Nicotiana tabacum HOM05D007435 ORTHO05D009338 8.6e-14 80.9 129 45.0
ECA248G3437 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-13 80.1 101 48.5
MBI13_g04786_MAGBIO Magnolia biondii HOM05D007435 ORTHO05D009338 1.9e-13 79.7 122 44.3
Psat5g213320 Pisum sativum HOM05D007435 ORTHO05D009338 2.5e-13 79.3 134 39.6
Solyc01g068190.3 Solanum lycopersicum HOM05D007435 ORTHO05D009338 7.3e-13 77.8 106 43.4
Sopen01g030130 Solanum pennellii HOM05D007435 ORTHO05D009338 7.3e-13 77.8 106 43.4
Ciclev10032994m.g Citrus clementina HOM05D007435 ORTHO05D009338 9.5e-13 77.4 97 45.4
Peaxi162Scf00087g00129 Petunia axillaris HOM05D007435 ORTHO05D009338 1.2e-12 77.0 88 50.0
PGSC0003DMG401006753 Solanum tuberosum HOM05D007435 ORTHO05D009338 1.2e-12 77.0 96 45.8
Nitab4.5_0000316g0230 Nicotiana tabacum HOM05D002000 ORTHO05D002027 1.6e-12 76.6 129 42.6
PGR031G0502 Punica granatum HOM05D007435 ORTHO05D009338 1.6e-12 76.6 130 39.2
HanXRQChr01g0020861 Helianthus annuus HOM05D007435 ORTHO05D009338 4.7e-12 75.1 93 46.2
Glyma.11G149600 Glycine max HOM05D007435 ORTHO05D009338 1.4e-11 73.6 111 41.4
Lalb_Chr25g0282731 Lupinus albus HOM05D007435 ORTHO05D009338 3.1e-11 72.4 102 44.1
CDE08G0963 Ceratophyllum demersum HOM05D000584 ORTHO05D009338 1.5e-10 70.1 86 50.0
Phvul.005G033400 Phaseolus vulgaris HOM05D007435 ORTHO05D009338 1.5e-10 70.1 130 35.4
Atru.chr11.2511 Acer truncatum HOM05D007435 ORTHO05D009338 4.4e-10 68.6 134 37.3
Sabra01G0016900 Salix brachista HOM05D007435 ORTHO05D009338 4.4e-10 68.6 91 47.3
arahy.Tifrunner.gnm1.ann1.4Y0UDN Arachis hypogaea HOM05D007435 ORTHO05D009338 7.5e-10 67.8 138 37.0
HPP92_025000 Vanilla planifolia HOM05D007435 ORTHO05D009338 7.5e-10 67.8 109 43.1
CDE06G1029 Ceratophyllum demersum HOM05D007435 ORTHO05D009338 9.8e-10 67.4 87 46.0
Hma1.2p1_0269F.1_g107800 Hydrangea macrophylla HOM05D007435 ORTHO05D009338 1.3e-09 67.0 58 53.4
vmacro19756 Vaccinium macrocarpon HOM05D007435 ORTHO05D009338 1.7e-09 66.6 75 50.7
VMungo1080G0635 Vigna mungo HOM05D007435 ORTHO05D009338 3.7e-09 65.5 133 32.3
Aqoxy1G00332 Aquilegia oxysepala HOM05D007435 ORTHO05D009338 4.9e-09 65.1 74 48.6
Ca_27018_v3 Cicer arietinum L. HOM05D007435 ORTHO05D009338 1.1e-08 63.9 99 45.5
Hund13323 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.1e-08 63.9 51 62.7
arahy.Tifrunner.gnm1.ann1.KRJM02 Arachis hypogaea HOM05D007435 ORTHO05D009338 1.4e-08 63.5 101 39.6
BcaB03g12705 Brassica carinata HOM05D007435 ORTHO05D009338 1.2e-07 60.5 43 72.1
Zm00001eb363190 Zea mays HOM05D007435 ORTHO05D009338 7.8e-07 57.8 110 35.5
Haze_19805 Corylus avellana HOM05D007435 ORTHO05D009338 1.0e-06 57.4 73 46.6


User provided reference genes

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