Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL304U10040 Arabidopsis lyrata HOM05D017090 ORTHO05D018449 1.4e-136 489.6 245 100.0
CARHR079810 Cardamine hirsuta HOM05D017090 ORTHO05D018449 1.7e-36 157.1 161 51.6
AL3G16000 Arabidopsis lyrata HOM05D017090 ORTHO05D018449 1.6e-34 150.6 73 100.0
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 2.5e-32 143.3 134 49.3
BolC5t34839H Brassica oleracea HOM05D017090 ORTHO05D018449 4.3e-24 115.9 143 42.7
AL304U10020 Arabidopsis lyrata HOM05D017090 ORTHO05D018449 4.4e-21 105.9 101 54.5
AL304U10010 Arabidopsis lyrata HOM05D012802 ORTHO05D014772 2.9e-20 103.2 54 94.4
Carub.0003s0472 Capsella rubella HOM05D012802 ORTHO05D014772 2.1e-18 97.1 54 87.0
AT3G05440 Arabidopsis thaliana HOM05D012802 ORTHO05D014772 3.5e-18 96.3 54 88.9
BcaB04g21448 Brassica carinata HOM05D012802 ORTHO05D014772 3.5e-18 96.3 69 71.0
Sp3g04290 Schrenkiella parvula HOM05D012802 ORTHO05D014772 7.8e-18 95.1 54 87.0
BcaC09g47825 Brassica carinata HOM05D012802 ORTHO05D014772 2.3e-17 93.6 49 87.8
BNapus_Darmor_BZH_scaffold_114p00070 Brassica napus HOM05D012802 ORTHO05D014772 2.3e-17 93.6 49 87.8
BolC1t05694H Brassica oleracea HOM05D012802 ORTHO05D014772 2.3e-17 93.6 49 87.8
BraSC132t45503Z Brassica rapa HOM05D012802 ORTHO05D014772 2.3e-17 93.6 49 87.8
Thhalv10022221m.g Eutrema salsugineum HOM05D012802 ORTHO05D014772 1.5e-16 90.9 49 89.8
CARHR079780 Cardamine hirsuta HOM05D012802 ORTHO05D014772 4.7e-15 85.9 69 63.8
A10p02270 Brassica napus HOM05D009118 ORTHO05D011494 3.8e-12 76.3 145 35.2
Aa31LG5G15940 Aethionema arabicum HOM05D012802 ORTHO05D014772 2.4e-11 73.6 47 76.6
BraA10t42493Z Brassica rapa HOM05D009118 ORTHO05D011494 3.2e-11 73.2 125 36.0
AL3G17230 Arabidopsis lyrata HOM05D009118 ORTHO05D011494 4.2e-11 72.8 157 29.3
BcaC05g30122 Brassica carinata HOM05D017090 ORTHO05D018449 5.4e-11 72.4 143 32.2
THA.LOC104801556 Tarenaya hassleriana HOM05D002279 ORTHO05D002644 1.3e-09 67.8 158 26.6
AL3G17210 Arabidopsis lyrata HOM05D009118 ORTHO05D011494 1.7e-09 67.4 187 29.4
BcaB02g06908 Brassica carinata HOM05D009118 ORTHO05D011494 5.1e-09 65.9 126 33.3
THA.LOC104822513 Tarenaya hassleriana HOM05D000069 ORTHO05D015385 5.1e-09 65.9 84 39.3
AT1G03720 Arabidopsis thaliana HOM05D009118 ORTHO05D011494 5.6e-08 62.4 128 30.5
AL1G13260 Arabidopsis lyrata HOM05D009118 ORTHO05D011494 1.6e-07 60.8 140 30.7
BolC5t34750H Brassica oleracea HOM05D009118 ORTHO05D011494 2.8e-07 60.1 143 33.6
THA.LOC104809074 Tarenaya hassleriana HOM05D000069 ORTHO05D025459 6.2e-07 58.9 88 33.0
AT5G17080 Arabidopsis thaliana HOM05D009118 ORTHO05D011494 8.1e-07 58.5 151 25.8
THA.LOC104801561 Tarenaya hassleriana HOM05D009118 ORTHO05D011494 2.4e-06 57.0 138 25.4
Carub.0007s2682 Capsella rubella HOM05D000069 ORTHO05D015385 6.9e-06 55.5 145 28.3


User provided reference genes

Program Settings