Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 9.9e-143 510.0 237 100.0
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 6.6e-123 444.1 266 80.8
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 3.6e-121 438.3 241 86.7
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 3.5e-116 421.8 241 82.2
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 4.6e-116 421.4 238 82.8
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 2.2e-110 402.5 239 80.8
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 3.0e-107 392.1 233 79.8
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 5.1e-107 391.3 233 79.4
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 7.4e-106 387.5 233 78.5
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 7.4e-106 387.5 256 73.8
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 4.9e-102 374.8 235 75.7
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 5.5e-93 344.7 218 73.9
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 1.8e-88 329.7 212 72.6
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 3.2e-85 318.9 209 68.4
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 5.5e-85 318.2 200 71.5
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 5.5e-85 318.2 196 73.0
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 7.2e-85 317.8 198 71.2
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 7.2e-85 317.8 216 65.7
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 9.4e-85 317.4 204 69.6
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 1.2e-84 317.0 212 70.3
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 1.6e-84 316.6 201 69.7
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 4.7e-84 315.1 201 70.1
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 1.0e-83 313.9 207 68.6
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 1.0e-83 313.9 205 69.8
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.4e-83 313.5 210 67.6
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 1.4e-83 313.5 212 69.8
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 2.3e-83 312.8 209 67.5
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 2.3e-83 312.8 232 61.2
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 5.1e-83 311.6 193 72.5
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 6.7e-83 311.2 200 70.0
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 1.1e-82 310.5 205 70.2
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 1.1e-82 310.5 199 70.4
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 2.0e-82 309.7 206 68.4
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 2.0e-82 309.7 206 68.4
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 2.0e-82 309.7 201 70.1
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 2.0e-82 309.7 197 70.1
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 4.4e-82 308.5 197 71.1
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 4.4e-82 308.5 206 67.5
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 5.7e-82 308.1 199 68.8
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 7.4e-82 307.8 213 65.7
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 9.7e-82 307.4 197 70.6
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 9.7e-82 307.4 225 64.0
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 1.3e-81 307.0 201 69.7
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 2.2e-81 306.2 200 68.0
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 2.8e-81 305.8 201 70.6
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 4.8e-81 305.1 221 62.4
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 4.8e-81 305.1 198 72.2
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 4.8e-81 305.1 198 67.2
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 4.8e-81 305.1 198 67.2
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 6.3e-81 304.7 197 69.5
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 8.2e-81 304.3 232 60.8
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 1.1e-80 303.9 205 66.8
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 1.4e-80 303.5 202 69.8
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.4e-80 303.5 209 67.0
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.4e-80 303.5 213 65.3
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 2.4e-80 302.8 228 61.8
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 3.1e-80 302.4 195 70.3
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 3.1e-80 302.4 217 62.7
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 9.1e-80 300.8 206 64.1
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 7.7e-79 297.7 201 67.2
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.7e-78 296.6 199 68.3
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 6.5e-78 294.7 229 59.8
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 6.5e-78 294.7 196 67.9
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 8.5e-78 294.3 198 66.2
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 3.2e-77 292.4 197 65.5
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 5.5e-77 291.6 214 62.6
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.2e-76 290.4 187 71.7
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 1.2e-76 290.4 197 66.5
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 1.6e-76 290.0 197 66.5
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 1.6e-76 290.0 207 63.8
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 3.6e-76 288.9 199 64.3
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 3.6e-76 288.9 199 66.3
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 4.7e-76 288.5 197 66.5
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 8.0e-76 287.7 199 63.8
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 1.0e-75 287.3 165 77.6
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 2.3e-75 286.2 236 57.6
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 1.5e-74 283.5 173 72.8
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 1.7e-73 280.0 228 56.1
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 1.4e-72 276.9 197 69.5
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 2.0e-71 273.1 162 73.5
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 5.0e-70 268.5 161 73.9
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 1.9e-69 266.5 198 66.2
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 6.1e-68 261.5 192 61.5
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 2.6e-66 256.1 193 60.1
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 3.4e-66 255.8 176 65.9
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 3.4e-66 255.8 171 66.1
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 5.3e-64 248.4 194 55.2
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 9.1e-64 247.7 202 57.4
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 4.5e-63 245.4 179 65.9
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 1.0e-62 244.2 167 65.3
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 1.7e-62 243.4 194 55.7
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 2.1e-60 236.5 133 78.9
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 3.4e-58 229.2 134 76.1
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 2.2e-57 226.5 144 70.1
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 5.9e-55 218.4 148 64.9
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 2.3e-51 206.5 166 57.8
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 1.1e-48 197.6 201 46.8
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 1.8e-43 180.3 210 47.1
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 1.5e-42 177.2 112 68.8
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 2.6e-42 176.4 121 64.5
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 5.8e-42 175.3 210 46.7
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 7.5e-42 174.9 93 84.9
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 4.3e-37 159.1 104 64.4
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 1.6e-36 157.1 215 38.6
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 6.4e-33 145.2 144 47.9
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 1.2e-28 131.0 88 65.9
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 8.1e-28 128.3 80 71.2
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 8.9e-19 98.2 57 73.7
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 1.5e-18 97.4 60 75.0
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 5.8e-18 95.5 71 66.2
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 2.9e-17 93.2 67 62.7
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 3.9e-14 82.8 68 52.9
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 1.1e-13 81.3 54 66.7
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 1.8e-11 73.9 77 45.5
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 1.5e-10 70.9 61 52.5
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 4.2e-08 62.8 91 39.6
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 4.2e-08 62.8 91 39.6
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 4.2e-08 62.8 91 39.6
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 4.2e-08 62.8 91 39.6
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 1.2e-07 61.2 90 38.9
Cpa.g.sc32.161 Carica papaya HOM05D006824 ORTHO05D008779 6.6e-06 55.5 33 72.7


User provided reference genes

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