Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G40390 Arabidopsis lyrata HOM05D004228 ORTHO05D005137 0.0e+00 1555.0 773 100.0
AT1G79690 Arabidopsis thaliana HOM05D004228 ORTHO05D005137 0.0e+00 1498.8 773 96.0
Sp5g34750 Schrenkiella parvula HOM05D004228 ORTHO05D005137 0.0e+00 1437.6 775 91.7
CARHR073460 Cardamine hirsuta HOM05D004228 ORTHO05D005137 0.0e+00 1437.2 775 91.2
Carub.0002s2655 Capsella rubella HOM05D004228 ORTHO05D005137 0.0e+00 1432.9 773 91.5
BraA07t30343Z Brassica rapa HOM05D004228 ORTHO05D005137 0.0e+00 1427.9 777 90.9
A07p26990 Brassica napus HOM05D004228 ORTHO05D005137 0.0e+00 1422.5 777 90.5
Thhalv10018131m.g Eutrema salsugineum HOM05D004228 ORTHO05D005137 0.0e+00 1421.8 773 90.7
BcaNung04171 Brassica carinata HOM05D004228 ORTHO05D005137 0.0e+00 1421.0 775 90.1
BolC6t38132H Brassica oleracea HOM05D004228 ORTHO05D005137 0.0e+00 1416.4 777 89.7
C06p29710 Brassica napus HOM05D004228 ORTHO05D005137 0.0e+00 1412.9 777 89.7
BcaB02g07234 Brassica carinata HOM05D004228 ORTHO05D005137 0.0e+00 1409.8 775 89.3
BcaB02g08706 Brassica carinata HOM05D004228 ORTHO05D005137 0.0e+00 1387.1 775 88.4
BcaC08g47528 Brassica carinata HOM05D004228 ORTHO05D005137 0.0e+00 1351.7 775 86.2
C06p53520 Brassica napus HOM05D004228 ORTHO05D005137 0.0e+00 1341.3 785 85.4
THA.LOC104813593 Tarenaya hassleriana HOM05D004228 ORTHO05D005137 0.0e+00 1333.9 773 84.5
Aa31LG4G1300 Aethionema arabicum HOM05D004228 ORTHO05D005137 0.0e+00 1331.2 776 85.2
BraA07t31978Z Brassica rapa HOM05D004228 ORTHO05D005137 0.0e+00 1313.9 781 84.5
BolC6t40368H Brassica oleracea HOM05D004228 ORTHO05D005137 0.0e+00 1309.3 783 83.8
A07p44700 Brassica napus HOM05D004228 ORTHO05D005137 0.0e+00 1305.0 786 83.8
THA.LOC104808168 Tarenaya hassleriana HOM05D004228 ORTHO05D005137 0.0e+00 1198.3 782 76.9
FvH4_6g28160 Fragaria vesca HOM05D004228 ORTHO05D005137 0.0e+00 1180.6 771 74.3
Prupe.3G104700 Prunus persica HOM05D004228 ORTHO05D005137 0.0e+00 1180.2 771 73.9
Ciclev10024933m.g Citrus clementina HOM05D004228 ORTHO05D005137 0.0e+00 1178.3 773 74.4
Potri.003G185951 Populus trichocarpa HOM05D004228 ORTHO05D005137 0.0e+00 1177.9 763 75.1
Potri.003G185600 Populus trichocarpa HOM05D004228 ORTHO05D005137 0.0e+00 1176.8 763 75.0
Potri.003G185776 Populus trichocarpa HOM05D004228 ORTHO05D005137 0.0e+00 1174.8 763 75.0
RcHm_v2.0_Chr2g0132121 Rosa chinensis HOM05D004228 ORTHO05D005137 0.0e+00 1172.9 771 73.5
CSS0026873 Camellia sinensis var. sinensis HOM05D004228 ORTHO05D005137 0.0e+00 1168.3 779 73.0
CiPaw.02G164000 Carya illinoinensis HOM05D004228 ORTHO05D005137 0.0e+00 1166.0 773 73.1
Dinv21435 Davidia involucrata HOM05D004228 ORTHO05D005137 0.0e+00 1161.7 771 73.7
Rhsim08G0202500 Rhododendron simsii HOM05D004228 ORTHO05D005137 0.0e+00 1161.7 811 70.2
FAN14G1073 Fragaria x ananassa HOM05D004228 ORTHO05D005137 0.0e+00 1160.2 808 70.8
Thecc.06G048200 Theobroma cacao HOM05D004228 ORTHO05D005137 0.0e+00 1154.0 773 72.6
TAR626G1406 Trochodendron aralioides HOM05D004228 ORTHO05D005137 0.0e+00 1154.0 772 71.9
Actinidia25487 Actinidia chinensis HOM05D004228 ORTHO05D005137 0.0e+00 1153.7 771 72.5
FAN09G0969 Fragaria x ananassa HOM05D004228 ORTHO05D005137 0.0e+00 1153.7 812 70.4
Sed0017026 Sechium edule HOM05D004228 ORTHO05D005137 0.0e+00 1152.1 771 72.1
TWI12G1267 Tripterygium wilfordii HOM05D004228 ORTHO05D005137 0.0e+00 1151.7 772 72.9
GSVIVG01016092001 Vitis vinifera HOM05D004228 ORTHO05D005137 0.0e+00 1149.4 769 72.8
Gohir.D10G000700 Gossypium hirsutum HOM05D004228 ORTHO05D005137 0.0e+00 1144.0 770 72.2
Glyma.13G072500 Glycine max HOM05D004228 ORTHO05D005137 0.0e+00 1142.9 774 72.0
Gorai.011G001100 Gossypium raimondii HOM05D004228 ORTHO05D005137 0.0e+00 1142.9 771 72.2
Duzib160G0712 Durio zibethinus HOM05D004228 ORTHO05D005137 0.0e+00 1140.9 773 71.8
Ca_13679_v3 Cicer arietinum L. HOM05D004228 ORTHO05D005137 0.0e+00 1139.0 773 71.2
Gohir.A10G000600 Gossypium hirsutum HOM05D004228 ORTHO05D005137 0.0e+00 1138.3 770 71.9
MSTRG.13911 Avicennia marina HOM05D004228 ORTHO05D005137 0.0e+00 1137.9 771 72.1
CANSAT64G2586 Cannabis sativa HOM05D004228 ORTHO05D005137 0.0e+00 1135.2 778 72.0
Sabra03G0135800 Salix brachista HOM05D004228 ORTHO05D005137 0.0e+00 1134.4 779 71.9
Solyc08g075390.4 Solanum lycopersicum HOM05D004228 ORTHO05D005137 0.0e+00 1134.0 769 72.2
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 0.0e+00 1133.6 771 71.2
Psat4g022640 Pisum sativum HOM05D004228 ORTHO05D005137 0.0e+00 1133.2 771 70.9
Migut.E01375 Erythranthe guttata HOM05D004228 ORTHO05D005137 0.0e+00 1129.4 769 71.9
Cc08_g05800 Coffea canephora HOM05D004228 ORTHO05D005137 0.0e+00 1128.2 769 71.7
Atru.chr1.2817 Acer truncatum HOM05D004228 ORTHO05D005137 0.0e+00 1127.5 757 72.7
Lj6g0018144 Lotus japonicus HOM05D004228 ORTHO05D005137 0.0e+00 1127.5 773 71.5
Sopen08g024020 Solanum pennellii HOM05D004228 ORTHO05D005137 0.0e+00 1126.7 769 71.8
HanXRQChr13g0411161 Helianthus annuus HOM05D004228 ORTHO05D005137 0.0e+00 1124.8 769 71.3
CAN.G930.1 Capsicum annuum HOM05D004228 ORTHO05D005137 0.0e+00 1124.4 770 71.0
Phvul.006G018900 Phaseolus vulgaris HOM05D004228 ORTHO05D005137 0.0e+00 1124.4 772 70.9
HanXRQChr17g0558091 Helianthus annuus HOM05D004228 ORTHO05D005137 0.0e+00 1121.3 770 70.8
VMungo0540G0565 Vigna mungo HOM05D004228 ORTHO05D005137 0.0e+00 1120.5 772 71.0
Ah.09g231750 Amaranthus hybridus HOM05D004228 ORTHO05D005137 0.0e+00 1119.4 769 71.7
arahy.Tifrunner.gnm1.ann1.1BZV33 Arachis hypogaea HOM05D004228 ORTHO05D005137 0.0e+00 1117.1 754 72.1
PSO170G5168 Papaver somniferum HOM05D004228 ORTHO05D005137 0.0e+00 1112.4 773 69.9
DCAR_030908 Daucus carota HOM05D004228 ORTHO05D005137 0.0e+00 1112.1 770 70.4
Nn8g40122 Nelumbo nucifera HOM05D004228 ORTHO05D005137 0.0e+00 1108.2 751 71.0
Lalb_Chr18g0048351 Lupinus albus HOM05D004228 ORTHO05D005137 0.0e+00 1107.8 773 70.1
Lsat_1_v5_gn_3_53241 Lactuca sativa HOM05D004228 ORTHO05D005137 0.0e+00 1107.4 770 70.6
CsaV3_7G031770 Cucumis sativus L. HOM05D004228 ORTHO05D005137 0.0e+00 1101.3 757 71.1
MELO3C023479.2 Cucumis melo HOM05D004228 ORTHO05D005137 0.0e+00 1100.1 757 71.2
EL10Ac8g19421 Beta vulgaris HOM05D004228 ORTHO05D005137 0.0e+00 1097.8 770 69.6
Aqoxy7G02340 Aquilegia oxysepala HOM05D004228 ORTHO05D005137 0.0e+00 1091.3 770 69.1
MELO3C023478.2 Cucumis melo HOM05D004228 ORTHO05D005137 0.0e+00 1090.1 771 68.4
ATR0789G048 Amborella trichopoda HOM05D004228 ORTHO05D005137 0.0e+00 1089.7 777 68.6
Lsat_1_v5_gn_6_17241 Lactuca sativa HOM05D004228 ORTHO05D005137 0.0e+00 1088.9 769 69.8
Haze_16698 Corylus avellana HOM05D004228 ORTHO05D005137 0.0e+00 1080.5 891 62.4
CsaV3_7G031780 Cucumis sativus L. HOM05D004228 ORTHO05D005137 0.0e+00 1080.1 770 68.1
Os02g0793300 Oryza sativa ssp. japonica HOM05D004228 ORTHO05D005137 0.0e+00 1078.2 769 69.1
ECA240G4106 Erigeron canadensis HOM05D004228 ORTHO05D005137 5.3e-312 1074.3 768 68.4
Zm00001eb192570 Zea mays HOM05D004228 ORTHO05D005137 1.8e-310 1068.9 768 68.0
ClCG09G003440 Citrullus lanatus HOM05D004228 ORTHO05D005137 6.8e-310 1067.0 761 68.3
AUR62002649 Chenopodium quinoa HOM05D004228 ORTHO05D005137 1.3e-308 1062.8 781 67.6
ECA240G2553 Erigeron canadensis HOM05D004228 ORTHO05D005137 6.0e-306 1053.9 748 68.4
DCAR_002193 Daucus carota HOM05D004228 ORTHO05D005137 2.5e-304 1048.5 772 67.1
HPP92_017167 Vanilla planifolia HOM05D004228 ORTHO05D005137 3.3e-304 1048.1 773 66.1
Actinidia18265 Actinidia chinensis HOM05D004228 ORTHO05D005137 1.6e-295 1019.2 676 73.4
MELO3C023481.2 Cucumis melo HOM05D004228 ORTHO05D005137 1.1e-294 1016.5 778 65.2
Medtr3g437740 Medicago truncatula HOM05D004228 ORTHO05D005137 7.6e-293 1010.4 695 71.1
SGA_v2.0_scaffold121G33058 Striga asiatica HOM05D004228 ORTHO05D005137 7.8e-290 1000.3 784 64.9
vmacro19079 Vaccinium macrocarpon HOM05D004228 ORTHO05D005137 1.1e-288 996.5 757 65.7
unitig_37.g12907 Utricularia gibba HOM05D004228 ORTHO05D005137 1.7e-284 982.6 769 64.6
MD17G1227300 Malus domestica HOM05D004228 ORTHO05D005137 1.2e-282 976.5 777 64.1
Eucgr.J03134 Eucalyptus grandis HOM05D004228 ORTHO05D005137 2.7e-282 975.3 663 71.5
FAN02G0630 Fragaria x ananassa HOM05D004228 ORTHO05D005137 1.3e-281 973.0 691 69.6
VMungo1080G1878 Vigna mungo HOM05D004228 ORTHO05D005137 8.1e-279 963.8 741 65.3
Peaxi162Scf00193g00726 Petunia axillaris HOM05D004228 ORTHO05D005137 1.8e-278 962.6 732 66.0
ATR0580G052 Amborella trichopoda HOM05D004228 ORTHO05D005137 3.1e-278 961.8 744 63.0
Pp3c5_190 Physcomitrium patens HOM05D004228 ORTHO05D005137 6.0e-274 947.6 762 62.1
arahy.Tifrunner.gnm1.ann1.GHRN5T Arachis hypogaea HOM05D004228 ORTHO05D005137 8.7e-273 943.7 745 65.0
Mapoly0059s0059 Marchantia polymorpha HOM05D004228 ORTHO05D005137 3.8e-268 928.3 761 61.5
SMO337G0028 Selaginella moellendorffii HOM05D004228 ORTHO05D005137 1.2e-266 923.3 768 58.7
arahy.Tifrunner.gnm1.ann1.XEX8KQ Arachis hypogaea HOM05D004228 ORTHO05D005137 1.4e-262 909.8 745 63.8
AagrBONN_evm.TU.Sc2ySwM_117.2286 Anthoceros agrestis HOM05D004228 ORTHO05D005137 1.3e-247 860.1 700 60.7
Nitab4.5_0002244g0120 Nicotiana tabacum HOM05D004228 ORTHO05D005137 1.5e-245 853.2 631 67.4
Nitab4.5_0000030g0500 Nicotiana tabacum HOM05D004228 ORTHO05D005137 1.0e-244 850.5 659 64.6
Lsat_1_v5_gn_0_21260 Lactuca sativa HOM05D004228 ORTHO05D005137 1.5e-232 810.1 659 61.2
Lsat_1_v5_gn_0_21180 Lactuca sativa HOM05D004228 ORTHO05D005137 3.3e-232 808.9 641 62.6
Manes.11G069700 Manihot esculenta HOM05D004228 ORTHO05D005137 2.0e-229 799.7 554 69.5
CsaV3_7G031760 Cucumis sativus L. HOM05D004228 ORTHO05D003934 2.9e-228 795.8 561 68.3
AUR62034058 Chenopodium quinoa HOM05D004228 ORTHO05D005137 4.1e-214 748.8 764 53.1
Hma1.2p1_0338F.1_g129690 Hydrangea macrophylla HOM05D004228 ORTHO05D005137 5.4e-214 748.4 509 71.1
Oeu057157.1 Olea europaea HOM05D004228 ORTHO05D005137 8.9e-185 651.4 441 71.9
arahy.Tifrunner.gnm1.ann1.W5V7W0 Arachis hypogaea HOM05D004228 ORTHO05D005137 1.3e-175 620.9 442 68.1
PSO017G2203 Papaver somniferum HOM05D004228 ORTHO05D005137 1.0e-143 515.0 350 70.0
PSO017G5477 Papaver somniferum HOM05D004228 ORTHO05D005137 1.2e-141 508.1 372 67.7
MBI14_g16439_MAGBIO Magnolia biondii HOM05D004228 ORTHO05D005137 7.0e-129 465.7 608 44.9
COL.COLO4_26790 Corchorus olitorius HOM05D004228 ORTHO05D005137 1.0e-111 408.7 274 72.3
SEGI_32687 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 3.2e-110 403.7 346 58.1
Cpa.g.sc167.19 Carica papaya HOM05D004228 ORTHO05D005137 4.1e-97 360.1 249 69.1
Lsat_1_v5_gn_3_49001 Lactuca sativa HOM05D004228 ORTHO05D005137 6.0e-88 329.7 250 62.8
COL.COLO4_26791 Corchorus olitorius HOM05D004228 ORTHO05D005137 1.1e-73 282.3 358 46.1
MBI14_g16438_MAGBIO Magnolia biondii HOM05D004228 ORTHO05D005137 5.6e-70 270.0 183 67.8
RcHm_v2.0_Chr2g0132171 Rosa chinensis HOM05D004228 ORTHO05D005137 1.2e-67 262.3 260 57.7
MD09G1228800 Malus domestica HOM05D004228 ORTHO05D005137 2.0e-67 261.5 266 51.9
Gorai.007G245800 Gossypium raimondii HOM05D004228 ORTHO05D005137 5.1e-63 246.9 154 76.6
MD00G1188200 Malus domestica HOM05D004228 ORTHO05D005137 3.3e-62 244.2 252 52.0
CBR_g49119 Chara braunii HOM05D004228 ORTHO05D005137 9.6e-62 242.7 225 54.7
Gorai.008G198300 Gossypium raimondii HOM05D004228 ORTHO05D005137 8.1e-61 239.6 137 82.5
Lsat_1_v5_gn_6_87921 Lactuca sativa HOM05D004228 ORTHO05D005137 8.1e-61 239.6 211 61.6
Gohir.D12G184901 Gossypium hirsutum HOM05D004228 ORTHO05D005137 2.2e-58 231.5 137 79.6
CBR_g49120 Chara braunii HOM05D000019 ORTHO05D000002 8.7e-47 193.0 204 49.0
CBR_g49132 Chara braunii HOM05D004228 ORTHO05D005137 9.0e-44 183.0 149 61.1
Nitab4.5_0000030g0490 Nicotiana tabacum HOM05D004228 ORTHO05D005137 4.5e-43 180.6 105 81.0
Oeu057158.1 Olea europaea HOM05D004228 ORTHO05D005137 5.8e-43 180.3 105 76.2
Gorai.006G048700 Gossypium raimondii HOM05D004228 ORTHO05D005137 7.6e-43 179.9 105 80.0
Nitab4.5_0002244g0110 Nicotiana tabacum HOM05D004228 ORTHO05D005137 7.6e-43 179.9 105 81.9
Glyma.20G046501 Glycine max HOM05D004228 ORTHO05D005137 5.5e-41 173.7 149 60.4
Cfa001845 Carpinus fangiana HOM05D004228 ORTHO05D005137 6.7e-39 166.8 119 67.2
SEGI_17966 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 1.4e-36 159.1 118 64.4
SEGI_04747 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 4.1e-36 157.5 105 67.6
FAN02G0140 Fragaria x ananassa HOM05D004228 ORTHO05D005137 1.5e-35 155.6 87 82.8
SEGI_21553 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 7.6e-35 153.3 91 76.9
Glyma.20G046401 Glycine max HOM05D004228 ORTHO05D005137 6.1e-32 143.7 93 75.3
CBR_g49131 Chara braunii HOM05D007088 ORTHO05D008477 3.9e-31 141.0 96 66.7
MD09G1229100 Malus domestica HOM05D004228 ORTHO05D005137 1.1e-30 139.4 85 74.1
Gorai.002G214900 Gossypium raimondii HOM05D004228 ORTHO05D005137 5.7e-30 137.1 79 79.7
Gohir.A06G076350 Gossypium hirsutum HOM05D004228 ORTHO05D005137 1.1e-28 132.9 89 71.9
Gohir.D02G099801 Gossypium hirsutum HOM05D004228 ORTHO05D005137 1.1e-28 132.9 89 71.9
Gohir.A07G034550 Gossypium hirsutum HOM05D004228 ORTHO05D005137 2.4e-28 131.7 89 70.8
Gohir.A05G304350 Gossypium hirsutum HOM05D004228 ORTHO05D005137 4.1e-28 131.0 83 74.7
Gohir.D13G121066 Gossypium hirsutum HOM05D004228 ORTHO05D005137 5.9e-27 127.1 79 73.4
CDE02G2004 Ceratophyllum demersum HOM05D004228 ORTHO05D005137 7.2e-25 120.2 89 66.3
Gohir.D09G001001 Gossypium hirsutum HOM05D004228 ORTHO05D005137 1.1e-22 112.8 212 36.3
SEGI_15998 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 5.7e-22 110.5 124 48.4
Gorai.009G406300 Gossypium raimondii HOM05D004228 ORTHO05D005137 8.2e-21 106.7 212 35.4
MD00G1188000 Malus domestica HOM05D004228 ORTHO05D005137 2.4e-20 105.1 72 66.7
MCO12G087 Micromonas commoda HOM05D004228 ORTHO05D005137 3.4e-19 101.3 162 38.9
Lsat_1_v5_gn_5_149700 Lactuca sativa HOM05D004228 ORTHO05D016156 3.2e-17 94.7 80 62.5
Actinidia00024 Actinidia chinensis HOM05D000639 ORTHO05D019441 1.5e-14 85.9 117 46.2
Gohir.A11G044150 Gossypium hirsutum HOM05D004228 ORTHO05D005137 1.1e-12 79.7 51 72.5
Lsat_1_v5_gn_4_114980 Lactuca sativa HOM05D004228 ORTHO05D005137 1.3e-10 72.8 61 60.7
Cre08.g381800 Chlamydomonas reinhardtii HOM05D004228 ORTHO05D005137 5.5e-09 67.4 93 41.9
MBI14_g16442_MAGBIO Magnolia biondii HOM05D004228 ORTHO05D005137 9.4e-09 66.6 45 64.4
BraA06t24594Z Brassica rapa HOM05D004228 ORTHO05D005137 2.1e-08 65.5 41 80.5
Cpa.g.sc167.21 Carica papaya HOM05D004228 ORTHO05D043558 4.7e-08 64.3 37 67.6
AL8G21450 Arabidopsis lyrata HOM05D004228 ORTHO05D079388 3.3e-06 58.2 60 53.3
unitig_26.g8931 Utricularia gibba HOM05D005721 ORTHO05D006758 5.7e-06 57.4 152 29.6
Pp3c5_70 Physcomitrium patens HOM05D004228 ORTHO05D005137 9.7e-06 56.6 44 56.8


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