Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 5.1e-93 344.4 168 100.0
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 3.8e-80 301.6 169 89.9
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 4.8e-75 284.6 155 90.3
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 8.1e-75 283.9 155 91.0
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 5.5e-71 271.2 155 84.5
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 5.5e-71 271.2 151 88.1
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 7.1e-71 270.8 155 83.9
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 2.1e-70 269.2 155 83.9
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 4.6e-70 268.1 154 83.8
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 1.8e-69 266.2 155 83.2
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 2.3e-69 265.8 154 83.1
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 1.4e-63 246.5 158 74.7
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 9.3e-63 243.8 159 74.8
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 3.9e-61 238.4 163 72.4
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 5.1e-61 238.0 156 74.4
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 6.7e-61 237.7 166 69.9
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 1.1e-60 236.9 173 69.4
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 3.3e-60 235.3 155 69.7
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 4.3e-60 235.0 159 72.3
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 5.7e-60 234.6 160 72.5
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 5.7e-60 234.6 166 69.9
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 7.4e-60 234.2 166 69.9
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 1.3e-59 233.4 155 72.9
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 8.2e-59 230.7 154 73.4
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 1.8e-58 229.6 160 71.2
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 2.4e-58 229.2 162 69.1
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 1.2e-57 226.9 164 67.7
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 2.0e-57 226.1 154 71.4
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 2.0e-57 226.1 156 70.5
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 2.0e-57 226.1 162 67.3
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 2.6e-57 225.7 155 73.5
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 4.5e-57 224.9 165 66.7
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 7.7e-57 224.2 154 70.1
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 7.7e-57 224.2 154 70.1
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 1.0e-56 223.8 162 67.9
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 1.3e-56 223.4 156 69.2
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 1.3e-56 223.4 162 67.3
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 1.7e-56 223.0 155 70.3
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 2.2e-56 222.6 158 72.2
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 3.8e-56 221.9 168 68.5
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 5.0e-56 221.5 155 69.7
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 6.5e-56 221.1 159 69.8
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 8.5e-56 220.7 164 67.1
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 8.5e-56 220.7 161 66.5
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 8.5e-56 220.7 155 69.0
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.1e-55 220.3 155 69.0
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 1.1e-55 220.3 158 67.7
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 1.4e-55 219.9 153 71.2
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 1.9e-55 219.5 162 68.5
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 1.9e-55 219.5 164 67.1
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 2.5e-55 219.2 160 66.9
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.5e-55 219.2 155 69.7
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 2.5e-55 219.2 154 68.8
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 3.2e-55 218.8 172 64.5
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 3.2e-55 218.8 155 69.7
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 4.2e-55 218.4 167 68.3
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 5.5e-55 218.0 155 68.4
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 7.2e-55 217.6 155 69.0
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 1.2e-54 216.9 173 64.2
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 1.2e-54 216.9 173 64.2
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 1.2e-54 216.9 158 65.8
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 1.6e-54 216.5 190 58.4
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 2.7e-54 215.7 154 65.6
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 7.9e-54 214.2 161 68.9
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 7.9e-54 214.2 161 68.9
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.0e-53 213.8 158 67.1
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 2.3e-53 212.6 155 69.0
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 3.0e-53 212.2 157 67.5
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 3.9e-53 211.8 158 70.3
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 5.1e-53 211.5 155 68.4
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 6.7e-53 211.1 157 67.5
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.1e-52 210.3 162 66.0
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 2.5e-52 209.1 163 62.6
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 3.3e-52 208.8 155 67.7
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 4.3e-52 208.4 155 63.2
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.7e-51 206.5 153 66.7
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 3.7e-51 205.3 168 64.3
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 6.3e-51 204.5 157 65.0
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 6.3e-51 204.5 155 65.8
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 8.2e-51 204.1 202 55.0
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 1.8e-50 203.0 154 67.5
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 1.5e-49 199.9 160 62.5
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 3.4e-49 198.7 157 63.1
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 1.0e-48 197.2 152 61.8
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 1.9e-47 193.0 224 50.0
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 2.1e-46 189.5 152 63.2
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 1.1e-44 183.7 135 68.1
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 2.6e-44 182.6 158 61.4
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 2.8e-43 179.1 123 71.5
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 8.2e-43 177.6 116 68.1
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 1.4e-42 176.8 114 73.7
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 4.1e-42 175.3 115 73.0
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 4.1e-42 175.3 113 73.5
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 3.8e-40 168.7 154 59.1
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 2.6e-36 156.0 156 55.8
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 1.8e-34 149.8 112 68.8
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 2.4e-34 149.4 93 76.3
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 2.9e-32 142.5 90 73.3
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 8.5e-32 141.0 110 64.5
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 2.7e-30 136.0 160 46.9
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 7.2e-23 111.3 75 69.3
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 4.1e-18 95.5 95 53.7
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 9.8e-12 74.3 67 55.2
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 1.8e-10 70.1 69 53.6
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 7.0e-10 68.2 53 56.6
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 9.2e-10 67.8 86 53.5


User provided reference genes

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