Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G39670 Arabidopsis lyrata HOM05D007695 ORTHO05D009675 2.3e-66 255.8 160 100.0
AT1G79200 Arabidopsis thaliana HOM05D007695 ORTHO05D009675 2.3e-58 229.2 160 93.1
Thhalv10019257m.g Eutrema salsugineum HOM05D007695 ORTHO05D009675 1.3e-53 213.4 161 78.9
BcaB02g08673 Brassica carinata HOM05D007695 ORTHO05D009675 7.1e-52 207.6 161 86.3
Sp5g34250 Schrenkiella parvula HOM05D007695 ORTHO05D009675 1.3e-50 203.4 161 85.1
CARHR072850 Cardamine hirsuta HOM05D007695 ORTHO05D009675 1.1e-47 193.7 136 92.6
BraA07t31939Z Brassica rapa HOM05D007695 ORTHO05D009675 1.7e-45 186.4 164 81.7
Carub.0002s2607 Capsella rubella HOM05D007695 ORTHO05D009675 1.2e-43 180.3 163 81.0
A07p44310 Brassica napus HOM05D007695 ORTHO05D009675 4.3e-41 171.8 90 90.0
C06p53060 Brassica napus HOM05D007695 ORTHO05D009675 4.3e-41 171.8 90 90.0
BolC6t40323H Brassica oleracea HOM05D007695 ORTHO05D009675 4.3e-41 171.8 90 90.0
BcaC08g47483 Brassica carinata HOM05D007695 ORTHO05D009675 9.6e-41 170.6 156 79.5
THA.LOC104808131 Tarenaya hassleriana HOM05D007695 ORTHO05D009675 9.9e-38 160.6 158 65.2
Aa31LG4G1810 Aethionema arabicum HOM05D007695 ORTHO05D009675 1.2e-35 153.7 266 39.8
CsaV3_7G022890 Cucumis sativus L. HOM05D007695 ORTHO05D009675 1.2e-27 127.1 156 62.8
Lj3g0020370 Lotus japonicus HOM05D007695 ORTHO05D009675 1.6e-27 126.7 87 65.5
Potri.007G068500 Populus trichocarpa HOM05D007695 ORTHO05D009675 3.5e-27 125.6 82 70.7
Cfa010552 Carpinus fangiana HOM05D007695 ORTHO05D009675 1.0e-26 124.0 163 63.8
COL.COLO4_32235 Corchorus olitorius HOM05D007695 ORTHO05D009675 1.3e-26 123.6 81 70.4
Gohir.A13G123700 Gossypium hirsutum HOM05D007695 ORTHO05D009675 2.3e-26 122.9 82 68.3
ClCG09G022690 Citrullus lanatus HOM05D007695 ORTHO05D009675 5.1e-26 121.7 73 75.3
Gohir.D13G127533 Gossypium hirsutum HOM05D007695 ORTHO05D009675 5.1e-26 121.7 82 67.1
Gorai.013G142800 Gossypium raimondii HOM05D007695 ORTHO05D009675 5.1e-26 121.7 82 67.1
Duzib213G0064 Durio zibethinus HOM05D007695 ORTHO05D009675 6.7e-26 121.3 85 67.1
PSO384G4287 Papaver somniferum HOM05D007695 ORTHO05D009675 6.7e-26 121.3 79 68.4
Psat1g013560 Pisum sativum HOM05D007695 ORTHO05D009675 6.7e-26 121.3 71 74.6
Glyma.15G259802 Glycine max HOM05D007695 ORTHO05D009675 1.1e-25 120.6 85 64.7
TPR.G33812 Trifolium pratense HOM05D007695 ORTHO05D009675 1.1e-25 120.6 133 65.4
PSO339G5408 Papaver somniferum HOM05D007695 ORTHO05D009675 1.5e-25 120.2 71 71.8
Potri.005G095700 Populus trichocarpa HOM05D007695 ORTHO05D009675 1.9e-25 119.8 85 67.1
Thecc.07G171400 Theobroma cacao HOM05D007695 ORTHO05D009675 1.9e-25 119.8 87 65.5
Aqoxy1G01977 Aquilegia oxysepala HOM05D007695 ORTHO05D009675 2.5e-25 119.4 162 62.3
Duzib187G1742 Durio zibethinus HOM05D000001 ORTHO05D000003 2.5e-25 119.4 87 64.4
HPP92_016681 Vanilla planifolia HOM05D007695 ORTHO05D009675 2.5e-25 119.4 75 69.3
Actinidia37127 Actinidia chinensis HOM05D007695 ORTHO05D009675 3.3e-25 119.0 80 67.5
Hma1.2p1_0119F.1_g056770 Hydrangea macrophylla HOM05D007695 ORTHO05D009675 3.3e-25 119.0 79 69.6
RcHm_v2.0_Chr5g0025651 Rosa chinensis HOM05D007695 ORTHO05D009675 3.3e-25 119.0 73 74.0
Sabra05G0078900 Salix brachista HOM05D007695 ORTHO05D009675 4.3e-25 118.6 82 68.3
CiPaw.11G064100 Carya illinoinensis HOM05D007695 ORTHO05D009675 7.4e-25 117.9 160 48.8
MD10G1206200 Malus domestica HOM05D007695 ORTHO05D009675 1.3e-24 117.1 87 60.9
CSS0012508 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 1.6e-24 116.7 87 62.1
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 1.6e-24 116.7 89 61.8
Dinv19595 Davidia involucrata HOM05D007695 ORTHO05D009675 1.6e-24 116.7 74 73.0
Lalb_Chr25g0284741 Lupinus albus HOM05D007695 ORTHO05D009675 1.6e-24 116.7 71 70.4
TWI32G1143 Tripterygium wilfordii HOM05D007695 ORTHO05D009675 1.6e-24 116.7 82 63.4
VMungo0147G0001 Vigna mungo HOM05D007695 ORTHO05D009675 2.1e-24 116.3 87 59.8
Eucgr.F04454 Eucalyptus grandis HOM05D007695 ORTHO05D009675 2.8e-24 115.9 76 69.7
FAN11G1768 Fragaria x ananassa HOM05D007695 ORTHO05D009675 4.8e-24 115.2 73 71.2
FAN21G0117 Fragaria x ananassa HOM05D007695 ORTHO05D009675 4.8e-24 115.2 73 71.2
FAN25G3643 Fragaria x ananassa HOM05D007695 ORTHO05D009675 4.8e-24 115.2 73 71.2
Rhsim04G0004200 Rhododendron simsii HOM05D007695 ORTHO05D009675 6.2e-24 114.8 169 59.8
QL04p080880 Quercus lobata HOM05D007695 ORTHO05D009675 8.1e-24 114.4 71 67.6
Sed0008622 Sechium edule HOM05D007695 ORTHO05D009675 1.1e-23 114.0 157 54.1
Zm00001eb233100 Zea mays HOM05D007695 ORTHO05D009675 1.1e-23 114.0 71 69.0
HanXRQChr15g0494421 Helianthus annuus HOM05D007695 ORTHO05D009675 1.4e-23 113.6 94 57.4
Oeu034976.1 Olea europaea HOM05D000672 ORTHO05D009675 1.4e-23 113.6 162 46.9
SalBow8G0946 Salvia bowleyana HOM05D007695 ORTHO05D009675 2.4e-23 112.8 90 62.2
Solyc05g008750.3 Solanum lycopersicum HOM05D007695 ORTHO05D009675 2.4e-23 112.8 157 59.9
GSVIVG01036789001 Vitis vinifera HOM05D007695 ORTHO05D009675 2.4e-23 112.8 166 49.4
MD05G1224500 Malus domestica HOM05D007695 ORTHO05D009675 4.0e-23 112.1 82 61.0
FvH4_3g15210 Fragaria vesca HOM05D007695 ORTHO05D009675 5.3e-23 111.7 73 69.9
Sopen05g004520 Solanum pennellii HOM05D007695 ORTHO05D009675 5.3e-23 111.7 157 58.0
Os02g0170200 Oryza sativa ssp. japonica HOM05D007695 ORTHO05D009675 9.0e-23 110.9 71 66.2
CANSAT80G0100 Cannabis sativa HOM05D007695 ORTHO05D009675 1.5e-22 110.2 71 64.8
FAN16G2644 Fragaria x ananassa HOM05D007695 ORTHO05D009675 1.5e-22 110.2 73 68.5
Lsat_1_v5_gn_7_110340 Lactuca sativa HOM05D007695 ORTHO05D009675 2.0e-22 109.8 80 58.8
PGSC0003DMG400030526 Solanum tuberosum HOM05D007695 ORTHO05D009675 2.6e-22 109.4 157 58.0
SGA_v2.0_scaffold7G03606 Striga asiatica HOM05D007695 ORTHO05D009675 2.6e-22 109.4 78 65.4
DCAR_016834 Daucus carota HOM05D007695 ORTHO05D009675 3.4e-22 109.0 159 46.5
Glyma.08G167800 Glycine max HOM05D007695 ORTHO05D009675 3.4e-22 109.0 159 58.5
Nitab4.5_0007560g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 3.4e-22 109.0 76 63.2
Ciclev10006169m.g Citrus clementina HOM05D007695 ORTHO05D009675 4.5e-22 108.6 157 52.9
Cc05_g01290 Coffea canephora HOM05D007695 ORTHO05D009675 5.8e-22 108.2 71 67.6
AUR62037645 Chenopodium quinoa HOM05D007695 ORTHO05D009675 7.6e-22 107.8 159 58.5
EL10Ac2g03268 Beta vulgaris HOM05D007695 ORTHO05D009675 1.3e-21 107.1 162 58.0
ECA236G2936 Erigeron canadensis HOM05D007695 ORTHO05D009675 1.3e-21 107.1 89 55.1
CAN.G610.6 Capsicum annuum HOM05D007695 ORTHO05D009675 1.7e-21 106.7 157 58.0
Nitab4.5_0010557g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 1.7e-21 106.7 76 61.8
Peaxi162Scf00225g00098 Petunia axillaris HOM05D007695 ORTHO05D009675 1.7e-21 106.7 172 41.9
Sc09g0007600 Simmondsia chinensis HOM05D007695 ORTHO05D009675 8.4e-21 104.4 78 56.4
PGR031G0168 Punica granatum HOM05D007695 ORTHO05D009675 1.1e-20 104.0 71 64.8
vmacro09774 Vaccinium macrocarpon HOM05D007695 ORTHO05D009675 1.1e-20 104.0 176 56.2
Migut.M01534 Erythranthe guttata HOM05D007695 ORTHO05D009675 6.0e-19 98.2 164 37.2
MSTRG.7074 Avicennia marina HOM05D007695 ORTHO05D009675 2.3e-18 96.3 157 53.5
SEGI_05035 Sequoiadendron giganteum HOM05D007695 ORTHO05D009675 3.0e-18 95.9 91 52.7
Mapoly0004s0265 Marchantia polymorpha HOM05D007695 ORTHO05D009675 3.9e-18 95.5 71 56.3
Hund12430 Selenicereus undatus HOM05D007695 ORTHO05D009675 5.6e-17 91.7 149 59.7
unitig_748.g7621 Utricularia gibba HOM05D000001 ORTHO05D000003 1.3e-16 90.5 71 56.3
Pp3c22_2020 Physcomitrium patens HOM05D007695 ORTHO05D009675 2.8e-16 89.4 73 52.1
Ah.16g106010 Amaranthus hybridus HOM05D007695 ORTHO05D009675 2.4e-15 86.3 70 57.1
Cre06.g255250 Chlamydomonas reinhardtii HOM05D007695 ORTHO05D009675 1.0e-13 80.9 72 50.0
Peaxi162Scf00225g00095 Petunia axillaris HOM05D007695 ORTHO05D009675 1.7e-13 80.1 54 64.8
CBR_g3127 Chara braunii HOM05D000017 ORTHO05D000013 3.2e-12 75.9 66 50.0
SMO145G0213 Selaginella moellendorffii HOM05D007695 ORTHO05D009675 1.6e-11 73.6 71 45.1


User provided reference genes

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