Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 9.8e-66 253.4 139 100.0
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 8.5e-62 240.4 139 95.0
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 3.8e-54 214.9 139 87.8
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 1.6e-52 209.5 142 86.6
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 1.4e-48 196.4 141 80.9
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 3.5e-47 191.8 138 81.9
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 1.0e-46 190.3 139 77.7
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 5.0e-46 188.0 129 83.7
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 4.7e-44 181.4 139 74.1
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 6.2e-44 181.0 139 74.1
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 1.4e-43 179.9 139 77.7
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 1.2e-42 176.8 124 79.8
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 2.9e-41 172.2 127 76.4
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 3.6e-36 155.2 136 68.4
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 3.4e-34 148.7 113 76.1
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 1.1e-32 143.7 134 67.9
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 7.8e-31 137.5 147 55.8
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 5.1e-30 134.8 125 60.8
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 3.3e-29 132.1 140 56.4
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 7.3e-29 131.0 105 66.7
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.2e-28 130.2 102 66.7
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.2e-28 130.2 102 66.7
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 1.6e-28 129.8 102 63.7
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 3.6e-28 128.6 131 56.5
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 6.2e-28 127.9 91 70.3
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 6.2e-28 127.9 132 54.5
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 8.1e-28 127.5 91 68.1
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 1.1e-27 127.1 123 59.3
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 1.8e-27 126.3 131 52.7
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 2.3e-27 125.9 130 57.7
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 4.0e-27 125.2 109 61.5
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 4.0e-27 125.2 91 70.3
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 5.2e-27 124.8 118 57.6
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 8.9e-27 124.0 104 59.6
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 8.9e-27 124.0 91 67.0
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 1.5e-26 123.2 113 59.3
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 2.0e-26 122.9 113 57.5
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 2.6e-26 122.5 131 55.7
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 4.4e-26 121.7 140 51.4
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 5.8e-26 121.3 142 51.4
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 7.6e-26 120.9 138 50.0
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 7.6e-26 120.9 118 56.8
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 7.6e-26 120.9 119 57.1
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 1.3e-25 120.2 134 53.0
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 1.3e-25 120.2 102 61.8
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 2.2e-25 119.4 137 51.1
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 2.2e-25 119.4 122 51.6
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 2.2e-25 119.4 101 59.4
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 2.2e-25 119.4 101 59.4
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 2.9e-25 119.0 125 51.2
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 4.9e-25 118.2 136 50.7
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 4.9e-25 118.2 107 57.9
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 6.4e-25 117.9 132 50.8
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 8.4e-25 117.5 90 65.6
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 8.4e-25 117.5 97 62.9
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 1.1e-24 117.1 101 60.4
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 1.4e-24 116.7 103 59.2
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 1.9e-24 116.3 137 50.4
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 2.4e-24 115.9 139 48.9
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.4e-24 115.9 91 62.6
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 2.4e-24 115.9 94 62.8
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 2.4e-24 115.9 137 46.7
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 2.4e-24 115.9 104 56.7
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 3.2e-24 115.5 127 48.8
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 3.2e-24 115.5 101 56.4
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 4.1e-24 115.2 124 50.8
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 7.1e-24 114.4 97 59.8
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 1.6e-23 113.2 113 55.8
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 1.6e-23 113.2 135 51.1
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 1.6e-23 113.2 137 46.0
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 1.6e-23 113.2 126 47.6
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 2.1e-23 112.8 102 54.9
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 2.1e-23 112.8 120 51.7
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.1e-23 112.8 120 51.7
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.1e-23 112.8 120 51.7
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 3.5e-23 112.1 120 51.7
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 3.5e-23 112.1 128 52.3
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 4.6e-23 111.7 123 52.8
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 6.0e-23 111.3 87 65.5
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 7.8e-23 110.9 137 49.6
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 1.0e-22 110.5 96 60.4
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 1.3e-22 110.2 113 54.0
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 1.3e-22 110.2 82 69.5
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 1.7e-22 109.8 90 58.9
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 3.0e-22 109.0 130 48.5
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 5.1e-22 108.2 137 48.2
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 6.6e-22 107.8 107 53.3
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 1.5e-21 106.7 144 45.8
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 2.5e-21 105.9 82 61.0
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 2.5e-21 105.9 122 50.8
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 9.6e-21 104.0 93 60.2
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 1.6e-20 103.2 96 56.2
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 2.1e-20 102.8 132 49.2
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 2.1e-20 102.8 110 52.7
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 4.7e-20 101.7 121 49.6
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 5.2e-19 98.2 146 42.5
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 6.8e-19 97.8 160 38.8
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 2.0e-18 96.3 89 55.1
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 2.0e-18 96.3 75 65.3
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.3e-17 93.6 76 61.8
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 1.1e-16 90.5 114 42.1
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 7.1e-16 87.8 103 40.8
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 9.3e-16 87.4 98 44.9
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 7.8e-15 84.3 61 68.9
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 5.1e-14 81.6 104 42.3
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 8.7e-14 80.9 121 41.3
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.9e-13 79.7 100 47.0
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 7.3e-13 77.8 139 30.9
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 7.3e-13 77.8 70 58.6
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 4.8e-12 75.1 100 44.0
C06p30180 Brassica napus HOM05D068201 ORTHO05D042045 3.1e-11 72.4 103 45.6
BolC6t38181H Brassica oleracea HOM05D068201 ORTHO05D042045 3.1e-11 72.4 103 45.6
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 4.0e-11 72.0 98 38.8
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 1.7e-09 66.6 120 35.0


User provided reference genes

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