Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G37260 Arabidopsis lyrata HOM05D006773 ORTHO05D008775 9.6e-158 560.1 275 100.0
Sp5g32210 Schrenkiella parvula HOM05D006773 ORTHO05D008775 2.8e-133 478.8 267 89.5
Thhalv10019004m.g Eutrema salsugineum HOM05D006773 ORTHO05D008775 1.5e-131 473.0 268 86.6
Thhalv10000289m.g Eutrema salsugineum HOM05D006773 ORTHO05D008775 4.7e-128 461.5 266 87.2
Carub.0002s2397 Capsella rubella HOM05D006773 ORTHO05D008775 5.2e-127 458.0 262 87.8
BraA07t31788Z Brassica rapa HOM05D006773 ORTHO05D008775 1.5e-126 456.4 264 86.7
CARHR070570 Cardamine hirsuta HOM05D006773 ORTHO05D008775 4.4e-126 454.9 261 87.0
AT1G77090 Arabidopsis thaliana HOM05D006773 ORTHO05D008775 1.7e-125 453.0 264 87.1
A07p42660 Brassica napus HOM05D006773 ORTHO05D008775 6.3e-125 451.1 264 86.0
BcaC08g47206 Brassica carinata HOM05D006773 ORTHO05D008775 8.2e-125 450.7 264 86.0
C06p51250 Brassica napus HOM05D006773 ORTHO05D008775 8.2e-125 450.7 264 86.0
Aa31LG4G7120 Aethionema arabicum HOM05D006773 ORTHO05D008775 4.0e-119 431.8 264 80.3
THA.LOC104813693 Tarenaya hassleriana HOM05D006773 ORTHO05D008775 3.5e-115 418.7 266 77.8
Atru.chr13.1690 Acer truncatum HOM05D006773 ORTHO05D008775 7.7e-107 391.0 240 79.2
Manes.02G174300 Manihot esculenta HOM05D006773 ORTHO05D008775 7.7e-107 391.0 239 79.1
Ciclev10002228m.g Citrus clementina HOM05D006773 ORTHO05D008775 2.3e-106 389.4 217 85.7
Thecc.08G143200 Theobroma cacao HOM05D006773 ORTHO05D008775 2.9e-106 389.0 228 81.6
Dinv25798 Davidia involucrata HOM05D006773 ORTHO05D008775 8.6e-106 387.5 226 81.9
CANSAT25G3413 Cannabis sativa HOM05D006773 ORTHO05D008775 1.5e-105 386.7 232 80.6
Sabra02G0057000 Salix brachista HOM05D006773 ORTHO05D008775 2.5e-105 386.0 248 77.8
Haze_17696 Corylus avellana HOM05D006773 ORTHO05D005980 5.5e-105 384.8 223 82.1
Cfa018374 Carpinus fangiana HOM05D006773 ORTHO05D008775 7.2e-105 384.4 222 82.9
Duzib093G1219 Durio zibethinus HOM05D006773 ORTHO05D008775 1.6e-104 383.3 233 80.7
MSTRG.22383 Avicennia marina HOM05D006773 ORTHO05D008775 3.6e-104 382.1 225 80.9
Migut.N03240 Erythranthe guttata HOM05D006773 ORTHO05D008775 8.0e-104 380.9 218 82.6
Potri.002G072400 Populus trichocarpa HOM05D006773 ORTHO05D008775 8.0e-104 380.9 245 77.6
GSVIVG01010018001 Vitis vinifera HOM05D006773 ORTHO05D008775 8.0e-104 380.9 231 81.0
Gohir.A02G067200 Gossypium hirsutum HOM05D006773 ORTHO05D008775 1.4e-103 380.2 216 82.9
Gohir.D02G073400 Gossypium hirsutum HOM05D006773 ORTHO05D008775 1.8e-103 379.8 216 81.9
Phvul.009G134500 Phaseolus vulgaris HOM05D006773 ORTHO05D008775 1.8e-103 379.8 226 80.1
Actinidia16591 Actinidia chinensis HOM05D006773 ORTHO05D008775 3.0e-103 379.0 247 74.9
Gorai.005G082800 Gossypium raimondii HOM05D006773 ORTHO05D008775 4.0e-103 378.6 216 82.4
QL09p028661 Quercus lobata HOM05D006773 ORTHO05D008775 2.6e-102 375.9 222 80.6
RcHm_v2.0_Chr6g0277361 Rosa chinensis HOM05D006773 ORTHO05D008775 3.4e-102 375.6 231 79.2
CAN.G2.47 Capsicum annuum HOM05D006773 ORTHO05D008775 5.7e-102 374.8 239 75.7
Glyma.06G122400 Glycine max HOM05D006773 ORTHO05D008775 9.8e-102 374.0 239 76.2
Nitab4.5_0004095g0010 Nicotiana tabacum HOM05D006773 ORTHO05D008775 9.8e-102 374.0 239 74.9
Nitab4.5_0000445g0090 Nicotiana tabacum HOM05D006773 ORTHO05D008775 1.3e-101 373.6 239 74.5
VMungo1309G1948 Vigna mungo HOM05D006773 ORTHO05D008775 1.3e-101 373.6 229 79.9
TAR625G1315 Trochodendron aralioides HOM05D006773 ORTHO05D008775 1.7e-101 373.2 231 79.7
CsaV3_7G025030 Cucumis sativus L. HOM05D006773 ORTHO05D008775 2.2e-101 372.9 264 71.2
ClCG09G009710 Citrullus lanatus HOM05D006773 ORTHO05D008775 3.7e-101 372.1 231 77.9
Oeu025718.1 Olea europaea HOM05D006773 ORTHO05D008775 3.7e-101 372.1 217 82.0
vmacro00729 Vaccinium macrocarpon HOM05D006773 ORTHO05D008775 3.7e-101 372.1 213 83.6
CiPaw.15G022300 Carya illinoinensis HOM05D006773 ORTHO05D008775 4.9e-101 371.7 223 80.3
COL.COLO4_33185 Corchorus olitorius HOM05D006773 ORTHO05D008775 4.9e-101 371.7 224 81.7
MD10G1012400 Malus domestica HOM05D006773 ORTHO05D008775 8.3e-101 370.9 232 78.9
Solyc04g064670.3 Solanum lycopersicum HOM05D006773 ORTHO05D008775 8.3e-101 370.9 231 77.5
arahy.Tifrunner.gnm1.ann1.85NLUF Arachis hypogaea HOM05D006773 ORTHO05D008775 2.4e-100 369.4 228 77.2
FvH4_2g14791 Fragaria vesca HOM05D006773 ORTHO05D008775 2.4e-100 369.4 223 80.3
FAN15G2829 Fragaria x ananassa HOM05D006773 ORTHO05D008775 2.4e-100 369.4 223 80.3
Medtr3g089890 Medicago truncatula HOM05D006773 ORTHO05D008775 2.4e-100 369.4 227 78.0
Prupe.8G017800 Prunus persica HOM05D006773 ORTHO05D008775 2.4e-100 369.4 223 80.7
PGSC0003DMG401024815 Solanum tuberosum HOM05D006773 ORTHO05D008775 3.2e-100 369.0 223 78.9
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 4.1e-100 368.6 215 82.3
Lalb_Chr08g0240801 Lupinus albus HOM05D006773 ORTHO05D008775 5.4e-100 368.2 240 75.0
Peaxi162Scf00263g00028 Petunia axillaris HOM05D006773 ORTHO05D008775 7.0e-100 367.9 239 73.6
Cc10_g12990 Coffea canephora HOM05D006773 ORTHO05D008775 9.2e-100 367.5 235 77.0
Glyma.04G241000 Glycine max HOM05D006773 ORTHO05D008775 9.2e-100 367.5 218 79.8
MELO3C023682.2 Cucumis melo HOM05D006773 ORTHO05D008775 1.6e-99 366.7 246 74.4
Rhsim09G0002200 Rhododendron simsii HOM05D006773 ORTHO05D008775 1.6e-99 366.7 204 85.3
ATR1136G180 Amborella trichopoda HOM05D006773 ORTHO05D008775 3.5e-99 365.5 247 73.7
TWI60G1234 Tripterygium wilfordii HOM05D006773 ORTHO05D008775 4.6e-99 365.2 239 75.7
MD05G1012500 Malus domestica HOM05D006773 ORTHO05D008775 1.0e-98 364.0 232 78.4
SalBow6G0822 Salvia bowleyana HOM05D006773 ORTHO05D008775 3.9e-98 362.1 225 78.7
Atru.BG.245.p Acer truncatum HOM05D006773 ORTHO05D008775 6.6e-98 361.3 231 76.2
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 6.6e-98 361.3 252 72.2
PGR042G0338 Punica granatum HOM05D006773 ORTHO05D008775 1.9e-97 359.8 238 76.1
Eucgr.F02746 Eucalyptus grandis HOM05D006773 ORTHO05D008775 2.5e-97 359.4 233 75.5
ECA246G0400 Erigeron canadensis HOM05D006773 ORTHO05D005980 9.5e-97 357.5 256 69.5
EL10Ac1g01469 Beta vulgaris HOM05D006773 ORTHO05D008775 4.7e-96 355.1 268 71.3
Lsat_1_v5_gn_6_96860 Lactuca sativa HOM05D006773 ORTHO05D008775 4.7e-96 355.1 215 79.1
DCAR_031498 Daucus carota HOM05D006773 ORTHO05D008775 6.1e-96 354.8 226 75.7
AUR62013482 Chenopodium quinoa HOM05D006773 ORTHO05D008775 8.0e-96 354.4 234 75.6
PSO675G5006 Papaver somniferum HOM05D006773 ORTHO05D008775 1.0e-95 354.0 219 76.7
AUR62026790 Chenopodium quinoa HOM05D006773 ORTHO05D008775 1.4e-95 353.6 220 79.5
Lj7C363G2 Lonicera japonica HOM05D006773 ORTHO05D008775 1.4e-95 353.6 218 78.9
FAN24G0253 Fragaria x ananassa HOM05D006773 ORTHO05D005980 2.3e-95 352.8 223 78.5
PSO541G0390 Papaver somniferum HOM05D006773 ORTHO05D008775 2.3e-95 352.8 253 70.0
Sc20g0003340 Simmondsia chinensis HOM05D006773 ORTHO05D008775 2.3e-95 352.8 215 80.0
Ah.16g108660 Amaranthus hybridus HOM05D006773 ORTHO05D008775 1.5e-94 350.1 263 68.1
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 1.3e-93 347.1 270 68.9
MBI06_g35966_MAGBIO Magnolia biondii HOM05D006773 ORTHO05D008775 3.7e-93 345.5 198 83.3
Cpa.g.sc49.74 Carica papaya HOM05D006773 ORTHO05D008775 2.0e-91 339.7 211 79.6
Psat5g080880 Pisum sativum HOM05D006773 ORTHO05D008775 1.7e-90 336.7 208 78.8
HPP92_004476 Vanilla planifolia HOM05D006773 ORTHO05D008775 5.6e-89 331.6 217 73.7
TPR.G18761 Trifolium pratense HOM05D006773 ORTHO05D008775 8.1e-88 327.8 205 77.6
SGA_v2.0_scaffold19G08634 Striga asiatica HOM05D006773 ORTHO05D008775 1.1e-87 327.4 177 85.9
FvH4_7g25010 Fragaria vesca HOM05D006773 ORTHO05D008775 2.0e-86 323.2 214 75.2
Os12g0190200 Oryza sativa ssp. japonica HOM05D006773 ORTHO05D008775 2.2e-85 319.7 226 68.6
arahy.Tifrunner.gnm1.ann1.61R3GI Arachis hypogaea HOM05D006773 ORTHO05D008775 1.3e-82 310.5 170 83.5
Nn5g28592 Nelumbo nucifera HOM05D006773 ORTHO05D008775 1.3e-82 310.5 170 87.6
Sed0012245 Sechium edule HOM05D006773 ORTHO05D008775 1.3e-82 310.5 174 83.3
Sopen04g026630 Solanum pennellii HOM05D006773 ORTHO05D008775 5.6e-81 305.1 170 82.4
unitig_52.g17539 Utricularia gibba HOM05D006773 ORTHO05D008775 6.2e-80 301.6 169 83.4
MBI06_g41413_MAGBIO Magnolia biondii HOM05D006773 ORTHO05D008775 1.4e-79 300.4 369 47.7
Pp3c1_24790 Physcomitrium patens HOM05D006773 ORTHO05D008775 5.8e-78 295.0 224 62.5
Mapoly0002s0218 Marchantia polymorpha HOM05D006773 ORTHO05D008775 1.0e-74 284.3 217 63.1
AagrBONN_evm.TU.Sc2ySwM_344.1575 Anthoceros agrestis HOM05D006773 ORTHO05D008775 1.1e-73 280.8 186 72.6
SMO270G0074 Selaginella moellendorffii HOM05D006773 ORTHO05D008775 3.9e-66 255.8 168 69.6
HPP92_004480 Vanilla planifolia HOM05D006773 ORTHO05D008775 3.1e-63 246.1 223 56.1
FAN06G4159 Fragaria x ananassa HOM05D006773 ORTHO05D008775 6.9e-63 245.0 250 56.0
Cre03.g198950 Chlamydomonas reinhardtii HOM05D006773 ORTHO05D008775 2.6e-54 216.5 260 44.6
CSS0027898 Camellia sinensis var. sinensis HOM05D006773 ORTHO05D008775 6.4e-53 211.8 159 67.9
SMO367G0103 Selaginella moellendorffii HOM05D006773 ORTHO05D008775 9.3e-44 181.4 134 63.4
PSO017G5067 Papaver somniferum HOM05D006773 ORTHO05D008775 2.7e-43 179.9 111 77.5
CSS0029334 Camellia sinensis var. sinensis HOM05D006773 ORTHO05D008775 6.7e-42 175.3 98 84.7
MCO01G018 Micromonas commoda HOM05D006773 ORTHO05D008775 5.9e-38 162.2 187 45.5
SEGI_34187 Sequoiadendron giganteum HOM05D006773 ORTHO05D008775 7.6e-38 161.8 111 70.3
PRCOL_00003420 Prasinoderma coloniale HOM05D006773 ORTHO05D008775 5.0e-37 159.1 228 41.2
Hma1.2p1_1563F.1_g290820 Hydrangea macrophylla HOM05D006773 ORTHO05D008775 1.1e-28 131.3 74 85.1
CBR_g39641 Chara braunii HOM05D006773 ORTHO05D008775 4.3e-25 119.4 96 57.3
ATR1136G134 Amborella trichopoda HOM05D006773 ORTHO05D008775 9.1e-23 111.7 60 81.7
AagrBONN_evm.TU.Sc2ySwM_368.1623 Anthoceros agrestis HOM05D006773 ORTHO05D008775 9.4e-20 101.7 240 32.9
Medtr6g018710 Medicago truncatula HOM05D006773 ORTHO05D008775 6.1e-19 99.0 62 74.2
CBR_g17613 Chara braunii HOM05D007080 ORTHO05D008990 3.3e-17 93.2 162 33.3
Pp3c4_10510 Physcomitrium patens HOM05D007080 ORTHO05D008990 4.8e-16 89.4 160 33.8
Migut.K00153 Erythranthe guttata HOM05D007080 ORTHO05D008990 5.3e-15 85.9 232 26.7
SMO347G0313 Selaginella moellendorffii HOM05D007080 ORTHO05D008990 1.6e-14 84.3 159 30.2
AagrBONN_evm.TU.Sc2ySwM_228.1885 Anthoceros agrestis HOM05D007080 ORTHO05D008990 4.5e-14 82.8 160 30.6
Mapoly0008s0145 Marchantia polymorpha HOM05D007080 ORTHO05D008990 1.0e-13 81.6 228 25.9
MCO07G710 Micromonas commoda HOM05D006773 ORTHO05D269516 1.5e-12 77.8 157 33.8
BolC6t40147H Brassica oleracea HOM05D006773 ORTHO05D008775 4.4e-09 66.2 70 58.6
Pp3c2_15810 Physcomitrium patens HOM05D006773 ORTHO05D316139 3.5e-06 56.6 110 37.3


User provided reference genes

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