Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 4.5e-200 701.0 355 100.0
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 5.2e-188 661.0 355 94.6
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 3.5e-184 648.3 355 93.5
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 1.5e-182 642.9 355 92.4
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 1.9e-182 642.5 355 92.4
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 1.2e-171 606.7 355 85.6
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 8.3e-170 600.5 356 87.4
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 8.3e-170 600.5 356 87.4
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 1.4e-169 599.7 356 87.1
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 1.6e-168 596.3 356 86.2
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 4.6e-168 594.7 356 86.2
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 7.3e-150 534.3 288 93.1
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 2.1e-141 506.1 363 71.6
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 9.0e-140 500.7 343 73.8
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 1.2e-139 500.4 361 73.7
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 1.5e-139 500.0 337 77.4
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 2.0e-139 499.6 355 72.1
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 7.6e-139 497.7 356 73.0
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 9.9e-139 497.3 354 71.2
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 2.2e-138 496.1 355 72.1
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 6.4e-138 494.6 306 80.1
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 8.4e-138 494.2 356 71.9
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 7.1e-137 491.1 342 72.8
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 9.3e-137 490.7 329 76.0
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 1.2e-136 490.3 357 70.6
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 2.7e-136 489.2 352 70.7
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 3.5e-136 488.8 369 70.5
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 4.6e-136 488.4 338 73.7
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 7.8e-136 487.6 354 70.6
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 1.0e-135 487.3 354 70.3
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 6.6e-135 484.6 303 79.9
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 1.5e-134 483.4 332 74.4
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 1.9e-134 483.0 360 70.6
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 4.3e-134 481.9 362 69.6
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 4.3e-134 481.9 341 73.3
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 5.6e-134 481.5 349 69.9
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 7.3e-134 481.1 305 78.4
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 1.3e-133 480.3 303 77.6
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 1.3e-133 480.3 352 71.3
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 2.8e-133 479.2 315 75.9
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.6e-133 478.8 304 78.6
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 6.2e-133 478.0 311 77.5
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 6.2e-133 478.0 357 69.7
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 8.1e-133 477.6 333 72.7
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 8.1e-133 477.6 333 72.7
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 1.1e-132 477.2 304 78.6
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 1.1e-132 477.2 353 70.0
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 1.4e-132 476.9 356 70.5
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.4e-132 476.9 313 75.4
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 1.8e-132 476.5 315 75.2
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 1.8e-132 476.5 359 68.5
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 2.4e-132 476.1 314 75.5
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 5.3e-132 474.9 358 69.0
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 9.0e-132 474.2 359 68.5
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 1.5e-131 473.4 339 71.1
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 2.0e-131 473.0 358 70.1
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 2.0e-131 473.0 313 74.8
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 2.0e-131 473.0 348 71.0
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 2.6e-131 472.6 311 75.6
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 3.4e-131 472.2 397 63.7
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 3.4e-131 472.2 328 73.8
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 2.9e-130 469.2 304 77.6
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 8.4e-130 467.6 357 66.9
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.4e-129 466.8 312 76.3
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 3.2e-129 465.7 341 71.3
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 3.2e-129 465.7 349 69.6
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 5.4e-129 464.9 335 69.0
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 7.1e-129 464.5 316 75.6
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 1.6e-128 463.4 306 76.8
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 7.9e-128 461.1 339 67.8
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.8e-127 459.9 313 73.8
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 1.5e-126 456.8 354 65.5
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 2.1e-125 453.0 299 76.9
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 1.1e-124 450.7 275 79.6
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 3.4e-123 445.7 307 73.0
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 2.2e-122 443.0 352 66.5
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 2.7e-120 436.0 300 73.3
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 1.8e-119 433.3 312 70.5
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 2.3e-119 433.0 304 72.0
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 2.1e-117 426.4 347 65.1
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 1.3e-114 417.2 447 51.9
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 1.6e-112 410.2 309 67.3
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 4.6e-112 408.7 303 69.6
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 2.5e-110 402.9 315 65.4
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 3.3e-110 402.5 307 66.1
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 1.1e-108 397.5 464 50.2
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 3.1e-108 396.0 340 61.2
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 1.1e-102 377.5 455 49.0
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 1.1e-102 377.5 286 68.5
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 5.7e-102 375.2 201 95.0
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.2e-101 373.2 289 65.1
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 4.5e-99 365.5 210 84.8
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 2.2e-98 363.2 326 58.6
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 5.9e-91 338.6 208 81.7
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 2.4e-84 316.6 335 53.4
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 1.0e-79 301.2 169 87.6
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 1.4e-79 300.8 319 52.7
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 9.7e-78 294.7 207 73.4
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.3e-77 294.3 202 76.2
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 6.5e-74 282.0 240 63.8
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 6.5e-74 282.0 166 84.9
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.1e-73 281.2 240 63.8
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 9.4e-73 278.1 193 75.6
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.1e-72 276.9 193 75.1
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 6.1e-72 275.4 151 89.4
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 8.8e-71 271.6 304 51.0
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.3e-69 267.7 188 76.1
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.3e-69 267.7 258 50.4
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 1.7e-69 267.3 167 79.6
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 4.9e-61 239.2 141 82.3
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 5.4e-60 235.7 188 64.9
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 5.9e-59 232.3 144 77.8
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.3e-58 230.3 259 49.0
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.3e-42 177.9 108 82.4
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 1.1e-36 158.3 97 75.3
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 5.6e-33 146.0 239 37.2
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 2.2e-29 134.0 113 60.2
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 3.8e-29 133.3 80 80.0
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 4.0e-23 113.2 102 52.0
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.8e-21 106.7 258 32.6
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 7.6e-14 82.4 48 77.1
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 3.0e-10 70.5 57 63.2
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 3.7e-08 63.5 71 49.3


User provided reference genes

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