Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G36200 Arabidopsis lyrata HOM05D004401 ORTHO05D005169 5.3e-77 291.2 174 100.0
AL7G14010 Arabidopsis lyrata HOM05D004401 ORTHO05D005169 1.8e-37 159.8 141 79.4
Carub.0007s0340 Capsella rubella HOM05D004401 ORTHO05D005169 2.7e-33 146.0 151 63.6
BraA08t34203Z Brassica rapa HOM05D004401 ORTHO05D005169 3.0e-32 142.5 147 73.5
BolC3t20224H Brassica oleracea HOM05D004401 ORTHO05D005169 6.3e-30 134.8 153 62.7
AT4G37210 Arabidopsis thaliana HOM05D004401 ORTHO05D005169 1.1e-29 134.0 143 73.4
A08p22480 Brassica napus HOM05D004401 ORTHO05D005169 5.4e-29 131.7 147 70.7
C03p79770 Brassica napus HOM05D004401 ORTHO05D005169 5.9e-28 128.3 147 70.7
BraA01t00189Z Brassica rapa HOM05D004401 ORTHO05D005169 6.1e-25 118.2 143 65.7
Sp7g34580 Schrenkiella parvula HOM05D004401 ORTHO05D005169 6.8e-24 114.8 175 58.9
CARHR245290 Cardamine hirsuta HOM05D004401 ORTHO05D005169 8.9e-24 114.4 153 59.5
A01p02010 Brassica napus HOM05D004401 ORTHO05D005169 2.6e-23 112.8 143 64.3
Thhalv10025057m.g Eutrema salsugineum HOM05D004401 ORTHO05D005169 3.7e-22 109.0 146 58.9
Aa31LG6G13770 Aethionema arabicum HOM05D004401 ORTHO05D005169 5.9e-20 101.7 151 61.6
COL.COLO4_22179 Corchorus olitorius HOM05D004401 ORTHO05D005169 1.2e-17 94.0 152 50.0
Atru.chr3.472 Acer truncatum HOM05D004401 ORTHO05D005169 8.0e-17 91.3 153 44.4
Cpa.g.sc15.60 Carica papaya HOM05D004401 ORTHO05D005169 1.4e-16 90.5 155 44.5
C01p02190 Brassica napus HOM05D004401 ORTHO05D005169 1.8e-16 90.1 148 59.5
BolC1t00211H Brassica oleracea HOM05D004401 ORTHO05D005169 1.8e-16 90.1 148 59.5
FvH4_1g14490 Fragaria vesca HOM05D004401 ORTHO05D005169 2.3e-16 89.7 155 43.9
FAN19G2756 Fragaria x ananassa HOM05D004401 ORTHO05D005169 2.3e-16 89.7 155 43.9
FAN26G1141 Fragaria x ananassa HOM05D004401 ORTHO05D005169 2.3e-16 89.7 155 43.9
CSS0030032 Camellia sinensis var. sinensis HOM05D004401 ORTHO05D005169 3.0e-16 89.4 153 44.4
CSS0031085 Camellia sinensis var. sinensis HOM05D004401 ORTHO05D005169 4.0e-16 89.0 152 44.7
Haze_15165 Corylus avellana HOM05D004401 ORTHO05D005169 4.0e-16 89.0 155 45.8
Dinv26777 Davidia involucrata HOM05D004401 ORTHO05D005169 4.0e-16 89.0 156 43.6
QL06p044258 Quercus lobata HOM05D004401 ORTHO05D005169 4.0e-16 89.0 156 43.6
FAN23G0479 Fragaria x ananassa HOM05D004401 ORTHO05D005169 6.8e-16 88.2 155 43.2
FAN28G2641 Fragaria x ananassa HOM05D004401 ORTHO05D005169 6.8e-16 88.2 155 43.2
Hma1.2p1_0739F.1_g211280 Hydrangea macrophylla HOM05D004401 ORTHO05D005169 8.9e-16 87.8 155 49.0
ClCG02G013050 Citrullus lanatus HOM05D004401 ORTHO05D005169 4.4e-15 85.5 145 42.8
Sed0006552 Sechium edule HOM05D004401 ORTHO05D005169 9.8e-15 84.3 141 43.3
MSTRG.15405 Avicennia marina HOM05D004401 ORTHO05D005169 1.3e-14 84.0 153 41.8
RhsimUnG0212100 Rhododendron simsii HOM05D004401 ORTHO05D005169 1.3e-14 84.0 151 40.4
Hma1.2p1_0261F.1_g104910 Hydrangea macrophylla HOM05D004401 ORTHO05D005169 2.2e-14 83.2 154 45.5
Cfa004233 Carpinus fangiana HOM05D004401 ORTHO05D005169 2.9e-14 82.8 155 47.1
Peaxi162Scf00535g00620 Petunia axillaris HOM05D004401 ORTHO05D005169 3.7e-14 82.4 152 40.1
RcHm_v2.0_Chr2g0103241 Rosa chinensis HOM05D004401 ORTHO05D005169 3.7e-14 82.4 154 42.2
THA.LOC104807569 Tarenaya hassleriana HOM05D004401 ORTHO05D005169 3.7e-14 82.4 146 53.4
Duzib147G0010 Durio zibethinus HOM05D004401 ORTHO05D005169 4.9e-14 82.0 153 45.1
Ah.03g142140 Amaranthus hybridus HOM05D004401 ORTHO05D005169 8.3e-14 81.3 156 39.7
unitig_0.g2308 Utricularia gibba HOM05D004401 ORTHO05D005169 1.4e-13 80.5 125 45.6
Potri.007G034200 Populus trichocarpa HOM05D004401 ORTHO05D005169 2.4e-13 79.7 150 44.0
Aqoxy5G01748 Aquilegia oxysepala HOM05D004401 ORTHO05D005169 5.4e-13 78.6 157 44.6
Nitab4.5_0000108g0170 Nicotiana tabacum HOM05D004401 ORTHO05D005169 5.4e-13 78.6 154 44.2
Nitab4.5_0005594g0020 Nicotiana tabacum HOM05D004401 ORTHO05D005169 5.4e-13 78.6 154 43.5
Sopen02g034780 Solanum pennellii HOM05D004401 ORTHO05D005169 5.4e-13 78.6 147 38.8
MELO3C020916.2 Cucumis melo HOM05D004401 ORTHO05D005169 7.0e-13 78.2 145 46.9
MD15G1273200 Malus domestica HOM05D004401 ORTHO05D005169 9.2e-13 77.8 150 48.7
Manes.13G132200 Manihot esculenta HOM05D004401 ORTHO05D005169 9.2e-13 77.8 157 43.9
Dinv39923 Davidia involucrata HOM05D004401 ORTHO05D005169 1.2e-12 77.4 152 47.4
CsaV3_2G017130 Cucumis sativus L. HOM05D004401 ORTHO05D005169 1.6e-12 77.0 145 47.6
Lalb_Chr05g0213081 Lupinus albus HOM05D004401 ORTHO05D005169 2.0e-12 76.6 151 38.4
MD02G1158400 Malus domestica HOM05D004401 ORTHO05D005169 2.7e-12 76.3 151 47.7
CSS0031753 Camellia sinensis var. sinensis HOM05D004401 ORTHO05D005169 3.5e-12 75.9 122 47.5
Oeu020614.1 Olea europaea HOM05D004401 ORTHO05D005169 3.5e-12 75.9 150 40.0
PSO700G0114 Papaver somniferum HOM05D004401 ORTHO05D005169 6.0e-12 75.1 162 40.1
Ciclev10025507m.g Citrus clementina HOM05D004401 ORTHO05D005169 7.8e-12 74.7 150 48.0
PSO170G1133 Papaver somniferum HOM05D004401 ORTHO05D005169 7.8e-12 74.7 162 39.5
Solyc02g090090.3 Solanum lycopersicum HOM05D004401 ORTHO05D005169 7.8e-12 74.7 149 42.3
PGSC0003DMG400010033 Solanum tuberosum HOM05D004401 ORTHO05D005169 7.8e-12 74.7 149 42.3
Eucgr.H01940 Eucalyptus grandis HOM05D004401 ORTHO05D005169 1.0e-11 74.3 151 41.7
DCAR_025670 Daucus carota HOM05D004401 ORTHO05D005169 1.3e-11 73.9 153 39.9
Gohir.D11G048500 Gossypium hirsutum HOM05D004401 ORTHO05D005169 1.3e-11 73.9 150 43.3
Thecc.01G045700 Theobroma cacao HOM05D004401 ORTHO05D005169 1.3e-11 73.9 151 45.0
CiPaw.01G029200 Carya illinoinensis HOM05D004401 ORTHO05D005169 1.7e-11 73.6 153 44.4
Potri.005G130800 Populus trichocarpa HOM05D004401 ORTHO05D005169 2.3e-11 73.2 158 45.6
Sabra07G0029800 Salix brachista HOM05D004401 ORTHO05D005169 2.3e-11 73.2 160 45.6
ECA232G2743 Erigeron canadensis HOM05D004401 ORTHO05D005169 3.0e-11 72.8 147 43.5
Hund14120 Selenicereus undatus HOM05D004401 ORTHO05D005169 3.0e-11 72.8 152 38.8
Rhsim08G0109400 Rhododendron simsii HOM05D004401 ORTHO05D005169 3.9e-11 72.4 142 44.4
CAN.G836.19 Capsicum annuum HOM05D004401 ORTHO05D005169 5.0e-11 72.0 151 47.0
Lj4A136G82 Lonicera japonica HOM05D004401 ORTHO05D005169 5.0e-11 72.0 152 39.5
TPR.G29860 Trifolium pratense HOM05D004401 ORTHO05D005169 5.0e-11 72.0 155 40.0
Migut.K00842 Erythranthe guttata HOM05D004401 ORTHO05D005169 6.6e-11 71.6 151 36.4
Prupe.7G145400 Prunus persica HOM05D004401 ORTHO05D005169 6.6e-11 71.6 154 51.3
Cc07_g05390 Coffea canephora HOM05D004401 ORTHO05D005169 8.6e-11 71.2 157 36.9
Gohir.A02G161600 Gossypium hirsutum HOM05D004401 ORTHO05D005169 8.6e-11 71.2 142 50.7
AUR62003232 Chenopodium quinoa HOM05D004401 ORTHO05D005169 1.1e-10 70.9 141 45.4
Glyma.11G061000 Glycine max HOM05D004401 ORTHO05D005169 1.1e-10 70.9 152 39.5
EL10Ac6g14845 Beta vulgaris HOM05D004401 ORTHO05D005169 1.5e-10 70.5 150 43.3
Ca_24810_v3 Cicer arietinum L. HOM05D004401 ORTHO05D005169 1.5e-10 70.5 155 36.1
PGR102G2627 Punica granatum HOM05D004401 ORTHO05D005169 1.5e-10 70.5 155 43.9
Os07g0122400 Oryza sativa ssp. japonica HOM05D004401 ORTHO05D005169 1.9e-10 70.1 156 46.8
HanXRQChr15g0489601 Helianthus annuus HOM05D004401 ORTHO05D005169 2.5e-10 69.7 147 44.9
Sc03g0001200 Simmondsia chinensis HOM05D004401 ORTHO05D005169 2.5e-10 69.7 156 45.5
TWI73G0228 Tripterygium wilfordii HOM05D004401 ORTHO05D005169 2.5e-10 69.7 157 47.1
AUR62027242 Chenopodium quinoa HOM05D004401 ORTHO05D005169 3.3e-10 69.3 141 48.2
Glyma.01G181200 Glycine max HOM05D004401 ORTHO05D005169 3.3e-10 69.3 152 42.1
Nn6g32163 Nelumbo nucifera HOM05D004401 ORTHO05D005169 4.3e-10 68.9 156 44.2
Medtr5g018600 Medicago truncatula HOM05D004401 ORTHO05D005169 5.6e-10 68.6 152 38.8
Gorai.003G019300 Gossypium raimondii HOM05D004401 ORTHO05D005169 9.5e-10 67.8 143 50.3
Actinidia12088 Actinidia chinensis HOM05D004401 ORTHO05D005169 1.2e-09 67.4 152 50.0
Lj2g0012735 Lotus japonicus HOM05D004401 ORTHO05D005169 1.2e-09 67.4 153 41.8
GSVIVG01003774001 Vitis vinifera HOM05D004401 ORTHO05D005169 1.2e-09 67.4 151 48.3
Gohir.D03G018900 Gossypium hirsutum HOM05D004401 ORTHO05D005169 1.6e-09 67.0 143 50.3
Gorai.007G208200 Gossypium raimondii HOM05D004401 ORTHO05D005169 2.8e-09 66.2 127 46.5
Sed0017517 Sechium edule HOM05D004401 ORTHO05D005169 2.8e-09 66.2 152 32.9
TAR625G0432 Trochodendron aralioides HOM05D004401 ORTHO05D005169 2.8e-09 66.2 155 38.1
VMungo1215G0638 Vigna mungo HOM05D004401 ORTHO05D005169 3.6e-09 65.9 153 49.0
SalBow1G0657 Salvia bowleyana HOM05D004401 ORTHO05D005169 4.7e-09 65.5 117 47.9
SalBow1G3467 Salvia bowleyana HOM05D004401 ORTHO05D005169 4.7e-09 65.5 117 47.9
CANSAT01G2530 Cannabis sativa HOM05D004401 ORTHO05D005169 8.0e-09 64.7 157 47.1
Gohir.A11G045000 Gossypium hirsutum HOM05D004401 ORTHO05D005169 8.0e-09 64.7 142 49.3
HPP92_019643 Vanilla planifolia HOM05D004401 ORTHO05D005169 8.0e-09 64.7 146 34.2
Gorai.007G052100 Gossypium raimondii HOM05D004401 ORTHO05D005169 1.1e-08 64.3 142 49.3
Lsat_1_v5_gn_4_177820 Lactuca sativa HOM05D004401 ORTHO05D005169 1.4e-08 63.9 142 47.9
MBI16_g31340_MAGBIO Magnolia biondii HOM05D004401 ORTHO05D005169 1.4e-08 63.9 183 41.5
Phvul.002G023700 Phaseolus vulgaris HOM05D004401 ORTHO05D005169 1.8e-08 63.5 153 48.4
arahy.Tifrunner.gnm1.ann1.6IB1GK Arachis hypogaea HOM05D004401 ORTHO05D005169 4.0e-08 62.4 167 37.7
CDE06G0525 Ceratophyllum demersum HOM05D004401 ORTHO05D005169 4.0e-08 62.4 159 37.1
HanXRQChr09g0264391 Helianthus annuus HOM05D004401 ORTHO05D005169 4.0e-08 62.4 142 47.9
TAR381G0351 Trochodendron aralioides HOM05D004401 ORTHO05D005169 4.0e-08 62.4 155 36.8
Duzib264G0051 Durio zibethinus HOM05D004401 ORTHO05D005169 8.9e-08 61.2 142 40.1
Lalb_Chr09g0322851 Lupinus albus HOM05D004401 ORTHO05D005169 8.9e-08 61.2 157 38.2
Ah.02g126040 Amaranthus hybridus HOM05D004401 ORTHO05D005169 2.0e-07 60.1 152 48.7
Rhsim06G0070300 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.6e-07 59.7 54 55.6
arahy.Tifrunner.gnm1.ann1.ZW82SR Arachis hypogaea HOM05D004401 ORTHO05D005169 7.5e-07 58.2 152 45.4
Sabra05G0106000 Salix brachista HOM05D004401 ORTHO05D005169 9.8e-07 57.8 41 63.4
CDE04G2769 Ceratophyllum demersum HOM05D004401 ORTHO05D005169 1.3e-06 57.4 158 36.1
SHI08724 Sapria himalayana HOM05D004401 ORTHO05D005169 6.4e-06 55.1 153 32.0
ATR0733G114 Amborella trichopoda HOM05D004401 ORTHO05D005169 8.3e-06 54.7 160 36.9
Zm00001eb117930 Zea mays HOM05D004401 ORTHO05D005169 8.3e-06 54.7 156 39.1


User provided reference genes

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