Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 8.7e-68 260.4 151 100.0
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 2.2e-63 245.7 156 94.9
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 3.2e-62 241.9 156 94.2
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 1.3e-60 236.5 157 93.0
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 6.7e-60 234.2 159 90.6
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 4.0e-57 224.9 160 87.5
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 6.9e-57 224.2 159 88.1
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 1.2e-56 223.4 153 88.9
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 4.5e-56 221.5 160 86.9
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 3.2e-54 215.3 153 87.6
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 7.1e-54 214.2 164 81.7
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 9.3e-54 213.8 153 86.9
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 7.9e-53 210.7 154 87.0
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 7.9e-53 210.7 146 87.7
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 1.0e-52 210.3 146 87.7
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 1.3e-52 209.9 153 86.3
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 2.3e-52 209.1 146 87.7
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 6.7e-52 207.6 146 87.0
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 1.6e-45 186.4 157 75.8
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 1.1e-43 180.3 144 77.8
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 3.3e-43 178.7 145 77.9
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 4.3e-43 178.3 158 74.7
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 4.3e-43 178.3 160 75.6
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 9.6e-43 177.2 160 71.2
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 1.6e-42 176.4 156 74.4
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 1.6e-42 176.4 150 74.0
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 2.1e-42 176.0 155 71.6
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 3.7e-42 175.3 157 73.2
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 3.7e-42 175.3 160 70.6
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 4.8e-42 174.9 146 76.0
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 1.1e-41 173.7 158 74.1
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 1.1e-41 173.7 145 75.9
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 1.8e-41 172.9 157 73.2
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 2.4e-41 172.6 154 75.3
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 2.4e-41 172.6 159 73.0
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 3.1e-41 172.2 162 71.6
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 5.3e-41 171.4 149 74.5
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 5.3e-41 171.4 158 73.4
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 6.9e-41 171.0 142 77.5
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 6.9e-41 171.0 163 71.8
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 9.0e-41 170.6 149 74.5
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 1.2e-40 170.2 158 70.9
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 1.2e-40 170.2 158 72.2
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 1.5e-40 169.9 147 74.1
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 2.6e-40 169.1 159 71.7
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 2.6e-40 169.1 160 70.6
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 3.4e-40 168.7 157 71.3
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 3.4e-40 168.7 160 72.5
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 3.4e-40 168.7 160 70.0
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 5.9e-40 167.9 143 72.7
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 5.9e-40 167.9 156 71.2
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 1.0e-39 167.2 165 67.9
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 1.3e-39 166.8 156 72.4
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 1.3e-39 166.8 143 74.1
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 1.7e-39 166.4 159 68.6
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 1.7e-39 166.4 151 71.5
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 2.9e-39 165.6 152 74.3
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 3.8e-39 165.2 155 71.6
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 3.8e-39 165.2 149 72.5
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 3.8e-39 165.2 148 72.3
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 5.0e-39 164.9 147 69.4
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 8.5e-39 164.1 156 70.5
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 1.1e-38 163.7 163 66.9
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 1.4e-38 163.3 114 85.1
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.4e-38 163.3 163 68.7
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 2.5e-38 162.5 143 66.4
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 2.5e-38 162.5 156 70.5
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 2.5e-38 162.5 147 70.7
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 3.2e-38 162.2 156 68.6
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 5.5e-38 161.4 143 72.7
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 5.5e-38 161.4 167 69.5
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 5.5e-38 161.4 158 67.7
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 5.5e-38 161.4 149 73.8
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 7.2e-38 161.0 157 67.5
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 9.3e-38 160.6 160 65.0
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 2.1e-37 159.5 152 71.1
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 3.6e-37 158.7 149 73.8
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 7.9e-37 157.5 155 68.4
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 7.9e-37 157.5 144 71.5
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 3.0e-36 155.6 159 67.9
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 3.0e-36 155.6 142 69.7
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 5.1e-36 154.8 147 71.4
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.9e-35 152.9 195 60.0
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 3.3e-35 152.1 182 59.9
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 7.4e-35 151.0 193 48.2
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 7.4e-35 151.0 124 77.4
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 2.8e-34 149.1 118 78.8
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 8.2e-34 147.5 124 75.8
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 1.2e-32 143.7 111 75.7
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 2.6e-32 142.5 118 73.7
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 2.6e-32 142.5 140 62.1
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.0e-31 140.6 111 74.8
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 1.0e-28 130.6 111 71.2
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 1.8e-25 119.8 146 62.3
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 2.4e-25 119.4 126 61.1
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 3.1e-25 119.0 168 47.0
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.2e-24 117.1 92 66.3
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 7.7e-24 114.4 117 59.8
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 1.3e-23 113.6 101 63.4
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 9.4e-22 107.5 155 46.5
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 2.1e-21 106.3 184 42.9
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 6.7e-20 101.3 84 64.3
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 5.3e-17 91.7 156 41.7
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 1.3e-15 87.0 87 50.6
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 5.2e-12 75.1 59 66.1
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 1.1e-09 67.4 60 53.3
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 1.2e-08 63.9 95 46.3
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 1.0e-07 60.8 96 37.5


User provided reference genes

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